About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr40994
transcription start site region 40994
MGI:5968761

<< first < prev1 next > last >>
Showing SNP(s) 1 - 63 of 63

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs211850618
MGI SNP Detail		 Chr4:19120561 Cnbd1 within coordinates of
Tssr40994 1950 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254897552
MGI SNP Detail		 Chr4:19120665 Cnbd1 within coordinates of
Tssr40994 1846 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs214727138
MGI SNP Detail		 Chr4:19120711 Cnbd1 within coordinates of
Tssr40994 1800 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239978269
MGI SNP Detail		 Chr4:19120986 Cnbd1 within coordinates of
Tssr40994 1525 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259302019
MGI SNP Detail		 Chr4:19120990 Cnbd1 within coordinates of
Tssr40994 1521 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs222515140
MGI SNP Detail		 Chr4:19120994 Cnbd1 within coordinates of
Tssr40994 1517 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs236276014
MGI SNP Detail		 Chr4:19121038 Cnbd1 within coordinates of
Tssr40994 1473 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs249749862
MGI SNP Detail		 Chr4:19121255 Cnbd1 within coordinates of
Tssr40994 1256 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219063642
MGI SNP Detail		 Chr4:19121282 Cnbd1 within coordinates of
Tssr40994 1229 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27694991
MGI SNP Detail		 Chr4:19121353 Cnbd1 within coordinates of
Tssr40994 1158 bp downstream
 SNP A/G A A A A A A A A A A A A G A
rs262508628
MGI SNP Detail		 Chr4:19121357 Cnbd1 within coordinates of
Tssr40994 1154 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs224540312
MGI SNP Detail		 Chr4:19121372 Cnbd1 within coordinates of
Tssr40994 1139 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G A
rs249577311
MGI SNP Detail		 Chr4:19121379 Cnbd1 within coordinates of
Tssr40994 1132 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264218372
MGI SNP Detail		 Chr4:19121444 Cnbd1 within coordinates of
Tssr40994 1067 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229438329
MGI SNP Detail		 Chr4:19121471 Cnbd1 within coordinates of
Tssr40994 1040 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G A G A G G G G G G G G G G G A G G G A
rs236154590
MGI SNP Detail		 Chr4:19121472 Cnbd1 within coordinates of
Tssr40994 1039 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs253700573
MGI SNP Detail		 Chr4:19121486 Cnbd1 within coordinates of
Tssr40994 1025 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T C
rs224152093
MGI SNP Detail		 Chr4:19121526 Cnbd1 within coordinates of
Tssr40994 985 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27694990
MGI SNP Detail		 Chr4:19121675 Cnbd1 within coordinates of
Tssr40994 836 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs214791758
MGI SNP Detail		 Chr4:19121722 Cnbd1 within coordinates of
Tssr40994 789 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs231380523
MGI SNP Detail		 Chr4:19121802 Cnbd1 within coordinates of
Tssr40994 709 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258180395
MGI SNP Detail		 Chr4:19121892 Cnbd1 within coordinates of
Tssr40994 619 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27694989
MGI SNP Detail		 Chr4:19121962 Cnbd1 within coordinates of
Tssr40994 549 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs27694988
MGI SNP Detail		 Chr4:19121989 Cnbd1 within coordinates of
Tssr40994 522 bp downstream
 SNP A/T A A A A A A T A A A A A A A A
rs249522843
MGI SNP Detail		 Chr4:19122166 Cnbd1 within coordinates of
Tssr40994 345 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213032548
MGI SNP Detail		 Chr4:19122235 Cnbd1 within coordinates of
Tssr40994 276 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238333216
MGI SNP Detail		 Chr4:19122269 Cnbd1 within coordinates of
Tssr40994 242 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258054389
MGI SNP Detail		 Chr4:19122333 Cnbd1 within coordinates of
Tssr40994 178 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224248404
MGI SNP Detail		 Chr4:19122376 Cnbd1 within coordinates of
Tssr40994 135 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27694987
MGI SNP Detail		 Chr4:19122410 Cnbd1 within coordinates of
Tssr40994 101 bp downstream
 SNP C/T T T T T T T C T T T T T T C T
rs252852517
MGI SNP Detail		 Chr4:19122434 Cnbd1 within coordinates of
Tssr40994 77 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27694986
MGI SNP Detail		 Chr4:19122586 Tssr40994 62 bp upstream
 SNP A/T T T T T T T A T T T T T T A T
rs236142256
MGI SNP Detail		 Chr4:19122644 Gm42258 within coordinates of
Tssr40994 120 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254902001
MGI SNP Detail		 Chr4:19122755 Gm42258 within coordinates of
Tssr40994 231 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228426513
MGI SNP Detail		 Chr4:19122815 Gm42258 within coordinates of
Tssr40994 291 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs245659598
MGI SNP Detail		 Chr4:19122873 Gm42258 within coordinates of
Tssr40994 349 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262676175
MGI SNP Detail		 Chr4:19122891 Gm42258 within coordinates of
Tssr40994 367 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231677770
MGI SNP Detail		 Chr4:19123104 Gm42258 within coordinates of
Tssr40994 580 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252811911
MGI SNP Detail		 Chr4:19123109 Gm42258 within coordinates of
Tssr40994 585 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216667355
MGI SNP Detail		 Chr4:19123116 Gm42258 within coordinates of
Tssr40994 592 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229229854
MGI SNP Detail		 Chr4:19123191 Gm42258 within coordinates of
Tssr40994 667 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243398624
MGI SNP Detail		 Chr4:19123209 Gm42258 within coordinates of
Tssr40994 685 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs586815231
MGI SNP Detail		 Chr4:19123212 Gm42258 within coordinates of
Tssr40994 688 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580731824
MGI SNP Detail		 Chr4:19123323 Gm42258 within coordinates of
Tssr40994 799 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212711904
MGI SNP Detail		 Chr4:19123409 Gm42258 within coordinates of
Tssr40994 885 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236116328
MGI SNP Detail		 Chr4:19123426 Gm42258 within coordinates of
Tssr40994 902 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T G T T G T T T G G T G T T T T T T T T T T G T T G T T T T G T T T G
rs256440267
MGI SNP Detail		 Chr4:19123432 Gm42258 within coordinates of
Tssr40994 908 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs583839904
MGI SNP Detail		 Chr4:19123503 Gm42258 within coordinates of
Tssr40994 979 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs215945166
MGI SNP Detail		 Chr4:19123811 Gm42258 within coordinates of
Tssr40994 1287 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs48819545
MGI SNP Detail		 Chr4:19123892 Gm42258 within coordinates of
Tssr40994 1368 bp upstream
 SNP G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241152997
MGI SNP Detail		 Chr4:19123909 Gm42258 within coordinates of
Tssr40994 1385 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C T C C C C C C C C C C C C C C C C C T C C C C
rs252713673
MGI SNP Detail		 Chr4:19123991 Gm42258 within coordinates of
Tssr40994 1467 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223066415
MGI SNP Detail		 Chr4:19124020 Gm42258 within coordinates of
Tssr40994 1496 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs230362239
MGI SNP Detail		 Chr4:19124025 Gm42258 within coordinates of
Tssr40994 1501 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249290028
MGI SNP Detail		 Chr4:19124079 Gm42258 within coordinates of
Tssr40994 1555 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T C T T T T T T T T T T T T T T T T T C T T T T
rs222433954
MGI SNP Detail		 Chr4:19124089 Gm42258 within coordinates of
Tssr40994 1565 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244459822
MGI SNP Detail		 Chr4:19124151 Gm42258 within coordinates of
Tssr40994 1627 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265213238
MGI SNP Detail		 Chr4:19124273 Gm42258 within coordinates of
Tssr40994 1749 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G G T G G G G G G G G G G G G G G G G T G G G G
rs224022831
MGI SNP Detail		 Chr4:19124281 Gm42258 within coordinates of
Tssr40994 1757 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T T C T T T T T T T T T T T T T T T T C T T T T
rs27694985
MGI SNP Detail		 Chr4:19124362 Gm42258 within coordinates of
Tssr40994 1838 bp upstream
 SNP C/T T T T T T T C T T T T T T T
rs260399699
MGI SNP Detail		 Chr4:19124396 Gm42258 within coordinates of
Tssr40994 1872 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228953384
MGI SNP Detail		 Chr4:19124427 Gm42258 within coordinates of
Tssr40994 1903 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243478071
MGI SNP Detail		 Chr4:19124514 Gm42258 within coordinates of
Tssr40994 1990 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 63 of 63
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory