Tssr42225 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Tssr42225
transcription start site region 42225
MGI:5969992

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs253750529 MGI SNP Detail Alliance Variant	Chr4:82210994	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1673 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs211789422 MGI SNP Detail Alliance Variant	Chr4:82210998	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1669 bp downstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs231823104 MGI SNP Detail Alliance Variant	Chr4:82211028	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1639 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs28102644 MGI SNP Detail Alliance Variant	Chr4:82211066	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1601 bp downstream	SNP	A/C		A			A	A		A		A			A								C					A	A			A					C	A				A		C												A
rs28102643 MGI SNP Detail Alliance Variant	Chr4:82211247	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1420 bp downstream	SNP	C/T		T			T	T		T		T			T								C					T	T			T					C	T				T		C												T
rs239843986 MGI SNP Detail Alliance Variant	Chr4:82211336	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1331 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs260753696 MGI SNP Detail Alliance Variant	Chr4:82211481	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1186 bp downstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G		T	G	G	G	G	G	G	G	G	G	G	G	G
rs227382173 MGI SNP Detail Alliance Variant	Chr4:82211502	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42221 within coordinates of Tssr42225 1165 bp downstream	SNP	A/T						A	A			T	A	A	A	A	A	A	A	A	A	A		A	A				A	T		A		A	T	A		A	A	A	A	A	A			A	A	A	A		A	A				T
rs28102642 MGI SNP Detail Alliance Variant	Chr4:82211547	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1120 bp downstream	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		T												C
rs28102641 MGI SNP Detail Alliance Variant	Chr4:82211670	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 997 bp downstream	SNP	A/G		G			G	G		G		G			G								A					G	G			G					A	G				G		G												G
rs28102640 MGI SNP Detail Alliance Variant	Chr4:82211832	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 835 bp downstream	SNP	C/T		T			T	T		T		T			T								T					T	T			T					T	T				T		C												T
rs28102639 MGI SNP Detail Alliance Variant	Chr4:82211846	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 821 bp downstream	SNP	C/G		C			C	C		C		C			C								C					G	C			C					C	C				C		C												C
rs257947138 MGI SNP Detail Alliance Variant	Chr4:82211933	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42222 within coordinates of Tssr42225 734 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	A	G
rs28102638 MGI SNP Detail Alliance Variant	Chr4:82211956	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 711 bp downstream	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		T												C
rs584448335 MGI SNP Detail Alliance Variant	Chr4:82211962	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 705 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs248281066 MGI SNP Detail Alliance Variant	Chr4:82211980	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 687 bp downstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs28102637 MGI SNP Detail Alliance Variant	Chr4:82211996	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 671 bp downstream	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		T												C
rs234410463 MGI SNP Detail Alliance Variant	Chr4:82212115	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 552 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs28102636 MGI SNP Detail Alliance Variant	Chr4:82212166	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 501 bp downstream	SNP	A/G		A			A	A		A		A			A								A					A	A			A					A	A				A		G												A
rs253689341 MGI SNP Detail Alliance Variant	Chr4:82212224	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 443 bp downstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs225823146 MGI SNP Detail Alliance Variant	Chr4:82212273	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 394 bp downstream	SNP	A/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T		A	T	T	T	T	T	T	T	T	T	T	T	T
rs243490865 MGI SNP Detail Alliance Variant	Chr4:82212283	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 384 bp downstream	SNP	A/C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C		A	C	C	C	C	C	C	C	A	C	C	C	C
rs215905833 MGI SNP Detail Alliance Variant	Chr4:82212316	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 351 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs28102635 MGI SNP Detail Alliance Variant	Chr4:82212374	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 293 bp downstream	SNP	C/T		T			T	T		T		T			T								T					T	T			T					T	T				T		C												T
rs260141962 MGI SNP Detail Alliance Variant	Chr4:82212443	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 224 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs578379296 MGI SNP Detail Alliance Variant	Chr4:82212627	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 40 bp downstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs580678414 MGI SNP Detail Alliance Variant	Chr4:82212633	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 34 bp downstream	SNP	A/G	G	G			G	G	G	G	G	G	G	G	G		G	G	G	G	G	G		G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	A	G	G	G	G
rs217904373 MGI SNP Detail Alliance Variant	Chr4:82212687	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 within coordinates of	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	C	T	T	T	T
rs237078222 MGI SNP Detail Alliance Variant	Chr4:82212688	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 within coordinates of	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs250632709 MGI SNP Detail Alliance Variant	Chr4:82212786	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 91 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs218288998 MGI SNP Detail Alliance Variant	Chr4:82212792	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 97 bp upstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs585107503 MGI SNP Detail Alliance Variant	Chr4:82213073	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 378 bp upstream	SNP	A/C	A	A			A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs28102634 MGI SNP Detail Alliance Variant	Chr4:82213126	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 431 bp upstream Tssr42229 within coordinates of	SNP	C/T		T			T	T		T		T			T								T					T	T			T					T	T				T		T												C
rs32705220 MGI SNP Detail Alliance Variant	Chr4:82213200	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 505 bp upstream	SNP	A/C				A	C											C
rs225295646 MGI SNP Detail Alliance Variant	Chr4:82213724	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1029 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	T	C	C	C	C	C	C	C	C	C	C	C	C		T	C	C	C	C	C	C	C	C	C	C	C	C
rs28102633 MGI SNP Detail Alliance Variant	Chr4:82213768	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1073 bp upstream	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs266237520 MGI SNP Detail Alliance Variant	Chr4:82213950	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1255 bp upstream	SNP	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A		A	A	A	A
rs226116897 MGI SNP Detail Alliance Variant	Chr4:82213951	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1256 bp upstream	SNP	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T		T	T	T	T
rs236938446 MGI SNP Detail Alliance Variant	Chr4:82214349	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1654 bp upstream	SNP	A	A	A			A		A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A		A	A	A	A	A		A	A	A	A	A	A	A	A		A	A	A	A
rs253722291 MGI SNP Detail Alliance Variant	Chr4:82214675	Nfib mRNA-UTR Nfib Noncoding-Transcript-Variant Tssr42225 1980 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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