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Mouse SNP Summary
Symbol
Name
ID 		Tssr42258
transcription start site region 42258
MGI:5970025

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Showing SNP(s) 1 - 35 of 35

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235247604
MGI SNP Detail		 Chr4:82422161 Nfib within coordinates of
Tssr42258 1934 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249358562
MGI SNP Detail		 Chr4:82422204 Nfib within coordinates of
Tssr42258 1891 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219988970
MGI SNP Detail		 Chr4:82422361 Nfib within coordinates of
Tssr42258 1734 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T C C T C T C C T T T T C T T T T T C T T C T C T C T T T T T T T C C T T T
rs238503911
MGI SNP Detail		 Chr4:82422406 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1689 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs259901360
MGI SNP Detail		 Chr4:82422449 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1646 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224183515
MGI SNP Detail		 Chr4:82422459 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1636 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251164847
MGI SNP Detail		 Chr4:82422505 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1590 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263950956
MGI SNP Detail		 Chr4:82422506 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1589 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234324508
MGI SNP Detail		 Chr4:82422636 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1459 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243255458
MGI SNP Detail		 Chr4:82422658 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1437 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254021313
MGI SNP Detail		 Chr4:82422680 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1415 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs226162799
MGI SNP Detail		 Chr4:82422739 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1356 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243853448
MGI SNP Detail		 Chr4:82422748 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1347 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217634521
MGI SNP Detail		 Chr4:82422788 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1307 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238241100
MGI SNP Detail		 Chr4:82422930 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 1165 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs260493719
MGI SNP Detail		 Chr4:82423121 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 974 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs218461348
MGI SNP Detail		 Chr4:82423185 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 910 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs230953648
MGI SNP Detail		 Chr4:82423256 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 839 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249391413
MGI SNP Detail		 Chr4:82423282 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 813 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs258792881
MGI SNP Detail		 Chr4:82423421 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 674 bp downstream
 SNP C/T T C
rs231335142
MGI SNP Detail		 Chr4:82423517 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42250 within coordinates of
Tssr42258 578 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs215632017
MGI SNP Detail		 Chr4:82423584 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42250 within coordinates of
Tssr42258 511 bp downstream
 SNP C/T C T
rs224213616
MGI SNP Detail		 Chr4:82423688 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 407 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248287222
MGI SNP Detail		 Chr4:82423783 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 312 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs263718524
MGI SNP Detail		 Chr4:82424533 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 429 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G C G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221336004
MGI SNP Detail		 Chr4:82424542 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 438 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs235736125
MGI SNP Detail		 Chr4:82424626 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 522 bp upstream
 SNP C/T C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254056817
MGI SNP Detail		 Chr4:82424767 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 663 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs226252901
MGI SNP Detail		 Chr4:82424829 Cpgi14398 within coordinates of
Nfib within coordinates of
Tssr42258 725 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs237693433
MGI SNP Detail		 Chr4:82425113 Cpgi14398 within coordinates of
Tssr42258 1009 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs263600794
MGI SNP Detail		 Chr4:82425569 Cpgi14398 within coordinates of
Tssr42258 1465 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232191543
MGI SNP Detail		 Chr4:82425832 Tssr42258 1728 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs584565106
MGI SNP Detail		 Chr4:82425851 Tssr42258 1747 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255092306
MGI SNP Detail		 Chr4:82425876 Tssr42258 1772 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218525951
MGI SNP Detail		 Chr4:82425991 Rr376744 within coordinates of
Tssr42258 1887 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
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Showing SNP(s) 1 - 35 of 35
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory