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Mouse SNP Summary
Symbol
Name
ID 		Tssr42378
transcription start site region 42378
MGI:5970145

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Showing SNP(s) 1 - 32 of 32

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244802670
MGI SNP Detail		 Chr4:87949579 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 1986 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs265802250
MGI SNP Detail		 Chr4:87949646 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 1919 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs233451249
MGI SNP Detail		 Chr4:87949648 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 1917 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260563798
MGI SNP Detail		 Chr4:87949656 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 1909 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254145631
MGI SNP Detail		 Chr4:87950153 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 1412 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs224749257
MGI SNP Detail		 Chr4:87950164 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 1401 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs243958601
MGI SNP Detail		 Chr4:87950295 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 1270 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs214587019
MGI SNP Detail		 Chr4:87950642 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 923 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253261527
MGI SNP Detail		 Chr4:87951303 Cpgi14428 within coordinates of
Mllt3 within coordinates of
Rr101188 within coordinates of
Tssr42378 262 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs218234290
MGI SNP Detail		 Chr4:87952040 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 430 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs583973308
MGI SNP Detail		 Chr4:87952108 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 498 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239447983
MGI SNP Detail		 Chr4:87952231 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 621 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs255285170
MGI SNP Detail		 Chr4:87952460 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 850 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs218035973
MGI SNP Detail		 Chr4:87952516 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 906 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs585838233
MGI SNP Detail		 Chr4:87952519 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 909 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230483872
MGI SNP Detail		 Chr4:87952681 Gm12631 within coordinates of
Rr101188 within coordinates of
Rr398326 within coordinates of
Tssr42378 1071 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs250972072
MGI SNP Detail		 Chr4:87952702 Gm12631 within coordinates of
Rr101188 within coordinates of
Rr398326 within coordinates of
Tssr42378 1092 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223161428
MGI SNP Detail		 Chr4:87952767 Gm12631 within coordinates of
Rr101188 within coordinates of
Rr398326 within coordinates of
Tssr42378 1157 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247566082
MGI SNP Detail		 Chr4:87952921 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 1311 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259084326
MGI SNP Detail		 Chr4:87952928 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 1318 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs225837664
MGI SNP Detail		 Chr4:87953128 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 1518 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248748011
MGI SNP Detail		 Chr4:87953186 Gm12631 within coordinates of
Rr101188 within coordinates of
Tssr42378 1576 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254249501
MGI SNP Detail		 Chr4:87953238 Rr101188 within coordinates of
Tssr42378 1628 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224656920
MGI SNP Detail		 Chr4:87953274 Rr101188 within coordinates of
Tssr42378 1664 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237873535
MGI SNP Detail		 Chr4:87953390 Rr101188 within coordinates of
Tssr42378 1780 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256477708
MGI SNP Detail		 Chr4:87953430 Rr101188 within coordinates of
Tssr42378 1820 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231791869
MGI SNP Detail		 Chr4:87953439 Rr101188 within coordinates of
Tssr42378 1829 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258516882
MGI SNP Detail		 Chr4:87953519 Rr101188 within coordinates of
Tssr42378 1909 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218113326
MGI SNP Detail		 Chr4:87953538 Rr101188 within coordinates of
Tssr42378 1928 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235096326
MGI SNP Detail		 Chr4:87953591 Rr101188 within coordinates of
Tssr42378 1981 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248729740
MGI SNP Detail		 Chr4:87953593 Rr101188 within coordinates of
Tssr42378 1983 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs212048440
MGI SNP Detail		 Chr4:87953607 Rr101188 within coordinates of
Tssr42378 1997 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 32 of 32
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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