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Mouse SNP Summary
Symbol
Name
ID 		Tssr42547
transcription start site region 42547
MGI:5970314

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213809147
MGI SNP Detail		 Chr4:101120117 Jak1 within coordinates of
Tssr42547 1936 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231790792
MGI SNP Detail		 Chr4:101120220 Jak1 within coordinates of
Tssr42547 1833 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs249241324
MGI SNP Detail		 Chr4:101120283 Jak1 within coordinates of
Tssr42547 1770 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs218206810
MGI SNP Detail		 Chr4:101120285 Jak1 within coordinates of
Tssr42547 1768 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235409300
MGI SNP Detail		 Chr4:101120290 Jak1 within coordinates of
Tssr42547 1763 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs263858081
MGI SNP Detail		 Chr4:101120424 Jak1 within coordinates of
Tssr42547 1629 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs225177830
MGI SNP Detail		 Chr4:101120451 Jak1 within coordinates of
Tssr42547 1602 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247978512
MGI SNP Detail		 Chr4:101120472 Jak1 within coordinates of
Tssr42547 1581 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262836288
MGI SNP Detail		 Chr4:101120476 Jak1 within coordinates of
Tssr42547 1577 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219596814
MGI SNP Detail		 Chr4:101120482 Jak1 within coordinates of
Tssr42547 1571 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238039596
MGI SNP Detail		 Chr4:101120577 Jak1 within coordinates of
Tssr42547 1476 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs255975025
MGI SNP Detail		 Chr4:101120582 Jak1 within coordinates of
Tssr42547 1471 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs582072890
MGI SNP Detail		 Chr4:101120711 Jak1 within coordinates of
Tssr42547 1342 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265675324
MGI SNP Detail		 Chr4:101121021 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 1032 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231487215
MGI SNP Detail		 Chr4:101121127 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 926 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs255988147
MGI SNP Detail		 Chr4:101121146 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 907 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213372298
MGI SNP Detail		 Chr4:101121152 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 901 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs230383560
MGI SNP Detail		 Chr4:101121207 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 846 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A C C A A A A A A C C C A A A A A A A A A A A A A A
rs243447919
MGI SNP Detail		 Chr4:101121233 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 820 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs212426922
MGI SNP Detail		 Chr4:101121263 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 790 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235498007
MGI SNP Detail		 Chr4:101121298 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 755 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C C C C C C A C C C C
rs260504583
MGI SNP Detail		 Chr4:101121387 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 666 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213837833
MGI SNP Detail		 Chr4:101121388 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 665 bp downstream
 SNP A A A
rs238063868
MGI SNP Detail		 Chr4:101121427 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 626 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262519851
MGI SNP Detail		 Chr4:101121473 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 580 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219650541
MGI SNP Detail		 Chr4:101121504 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 549 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238102656
MGI SNP Detail		 Chr4:101121534 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 519 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256085385
MGI SNP Detail		 Chr4:101121561 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 492 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs223465391
MGI SNP Detail		 Chr4:101121589 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 464 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250093156
MGI SNP Detail		 Chr4:101121625 Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 428 bp downstream
 SNP A/T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T A T A T T T T T T T A T
rs263525636
MGI SNP Detail		 Chr4:101121645 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 408 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231934097
MGI SNP Detail		 Chr4:101121659 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 394 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243862636
MGI SNP Detail		 Chr4:101121683 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 370 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs230814124
MGI SNP Detail		 Chr4:101121728 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 325 bp downstream
 SNP G/T T G
rs223997927
MGI SNP Detail		 Chr4:101121755 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 298 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs242041564
MGI SNP Detail		 Chr4:101121764 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 289 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217078316
MGI SNP Detail		 Chr4:101121783 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 270 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229604032
MGI SNP Detail		 Chr4:101121807 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 246 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs259641011
MGI SNP Detail		 Chr4:101121817 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 236 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217099475
MGI SNP Detail		 Chr4:101121818 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 235 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240279099
MGI SNP Detail		 Chr4:101121829 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 224 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs258049357
MGI SNP Detail		 Chr4:101121871 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 182 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T
rs213848744
MGI SNP Detail		 Chr4:101121877 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 176 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A
rs230830446
MGI SNP Detail		 Chr4:101121892 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 161 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249730952
MGI SNP Detail		 Chr4:101121967 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 86 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs223516790
MGI SNP Detail		 Chr4:101122018 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 35 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs247428707
MGI SNP Detail		 Chr4:101122153 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 78 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263313000
MGI SNP Detail		 Chr4:101122271 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 196 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224115486
MGI SNP Detail		 Chr4:101122310 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 235 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6305466
MGI SNP Detail		 Chr4:101122325 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 250 bp upstream
 SNP A/G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6305481
MGI SNP Detail		 Chr4:101122337 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 262 bp upstream
 SNP G/T G T
rs255226193
MGI SNP Detail		 Chr4:101122396 Cpgi14497 within coordinates of
Jak1 within coordinates of
Rr99637 within coordinates of
Tssr42547 321 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C
rs224139286
MGI SNP Detail		 Chr4:101122486 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 411 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs235685409
MGI SNP Detail		 Chr4:101122495 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 420 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585870599
MGI SNP Detail		 Chr4:101122589 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 514 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259576221
MGI SNP Detail		 Chr4:101122601 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 526 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C T C C C C C C C C C C C C
rs233625862
MGI SNP Detail		 Chr4:101122602 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 527 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A G A
rs254303152
MGI SNP Detail		 Chr4:101122613 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 538 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217561153
MGI SNP Detail		 Chr4:101122648 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 573 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs580052587
MGI SNP Detail		 Chr4:101122747 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 672 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs231978144
MGI SNP Detail		 Chr4:101122772 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 697 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580524539
MGI SNP Detail		 Chr4:101122844 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 769 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A
rs583034590
MGI SNP Detail		 Chr4:101122851 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 776 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579700467
MGI SNP Detail		 Chr4:101122863 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 788 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C A
rs246002624
MGI SNP Detail		 Chr4:101122870 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 795 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213911729
MGI SNP Detail		 Chr4:101122895 Cpgi14497 within coordinates of
Rr99637 within coordinates of
Tssr42547 820 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230911110
MGI SNP Detail		 Chr4:101122901 Rr99637 within coordinates of
Tssr42547 826 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249743830
MGI SNP Detail		 Chr4:101122916 Rr99637 within coordinates of
Tssr42547 841 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217493451
MGI SNP Detail		 Chr4:101122934 Rr99637 within coordinates of
Tssr42547 859 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242146533
MGI SNP Detail		 Chr4:101122966 Rr99637 within coordinates of
Tssr42547 891 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259460642
MGI SNP Detail		 Chr4:101122980 Rr99637 within coordinates of
Tssr42547 905 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs224216348
MGI SNP Detail		 Chr4:101123060 Rr99637 within coordinates of
Tssr42547 985 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244070755
MGI SNP Detail		 Chr4:101123103 Rr99637 within coordinates of
Tssr42547 1028 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs249614961
MGI SNP Detail		 Chr4:101123115 Rr99637 within coordinates of
Tssr42547 1040 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218543027
MGI SNP Detail		 Chr4:101123125 Rr99637 within coordinates of
Tssr42547 1050 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235698423
MGI SNP Detail		 Chr4:101123142 Rr99637 within coordinates of
Tssr42547 1067 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs259609404
MGI SNP Detail		 Chr4:101123160 Rr99637 within coordinates of
Tssr42547 1085 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G A A G G G G A G G G G G A G G G G G G A G G G G G G G A G G A A
rs225452938
MGI SNP Detail		 Chr4:101123187 Rr99637 within coordinates of
Tssr42547 1112 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248561629
MGI SNP Detail		 Chr4:101123188 Rr99637 within coordinates of
Tssr42547 1113 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263002079
MGI SNP Detail		 Chr4:101123196 Rr99637 within coordinates of
Tssr42547 1121 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232639859
MGI SNP Detail		 Chr4:101123245 Tssr42547 1170 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246063909
MGI SNP Detail		 Chr4:101123366 Tssr42547 1291 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257821966
MGI SNP Detail		 Chr4:101123393 Tssr42547 1318 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs225187666
MGI SNP Detail		 Chr4:101123394 Tssr42547 1319 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs243714202
MGI SNP Detail		 Chr4:101123467 Tssr42547 1392 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs219273354
MGI SNP Detail		 Chr4:101123523 Tssr42547 1448 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239655824
MGI SNP Detail		 Chr4:101123621 Tssr42547 1546 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs258387528
MGI SNP Detail		 Chr4:101123631 Tssr42547 1556 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215820619
MGI SNP Detail		 Chr4:101123811 Tssr42547 1736 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs232147487
MGI SNP Detail		 Chr4:101123856 Tssr42547 1781 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs249626757
MGI SNP Detail		 Chr4:101124042 Tssr42547 1967 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 91 of 91
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory