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Mouse SNP Summary
Symbol
Name
ID 		Tssr42906
transcription start site region 42906
MGI:5970673

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246325017
MGI SNP Detail		 Chr4:116496426 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1882 bp downstream
 SNP C/T C T
rs247933018
MGI SNP Detail		 Chr4:116496492 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1816 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs578514578
MGI SNP Detail		 Chr4:116496511 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1797 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581742611
MGI SNP Detail		 Chr4:116496512 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1796 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs264501094
MGI SNP Detail		 Chr4:116496571 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1737 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs226359478
MGI SNP Detail		 Chr4:116496580 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1728 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C T T C C C C C C C C C T C C C C C C C C C C
rs242410900
MGI SNP Detail		 Chr4:116496599 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1709 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253752107
MGI SNP Detail		 Chr4:116496623 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1685 bp downstream
 SNP A/C/T C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C C C C T C C C C
rs243801283
MGI SNP Detail		 Chr4:116496697 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1611 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G T T G G G G G T G G G G G G T G G G G G G G G G G G G
rs583771133
MGI SNP Detail		 Chr4:116496724 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1584 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258113801
MGI SNP Detail		 Chr4:116496740 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1568 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T C C T T T T T T T T T T T C T T T T T T C T T T T
rs231342011
MGI SNP Detail		 Chr4:116496806 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1502 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs259811449
MGI SNP Detail		 Chr4:116496833 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1475 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217571400
MGI SNP Detail		 Chr4:116496848 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1460 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A
rs265497044
MGI SNP Detail		 Chr4:116496864 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1444 bp downstream
 SNP C/T C T
rs230915739
MGI SNP Detail		 Chr4:116496866 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1442 bp downstream
 SNP A/G A G
rs212343007
MGI SNP Detail		 Chr4:116496901 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1407 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C A A C C C C C C C C C C C C A C C C C C C C C C C C C
rs233253720
MGI SNP Detail		 Chr4:116496974 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1334 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs251548074
MGI SNP Detail		 Chr4:116497113 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1195 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244863868
MGI SNP Detail		 Chr4:116497172 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42903 within coordinates of
Tssr42906 1136 bp downstream
 SNP A/G G A
rs238275906
MGI SNP Detail		 Chr4:116497325 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 983 bp downstream
 SNP A/C/T T T T T T T T T T T T T T T T T T T T C T T C T T T C C T T T T T C T T T T T T C T T T T T T T A T T T T
rs264242476
MGI SNP Detail		 Chr4:116497385 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 923 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212772821
MGI SNP Detail		 Chr4:116497386 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 922 bp downstream
 SNP A/G G A
rs236820642
MGI SNP Detail		 Chr4:116497489 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 819 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248373170
MGI SNP Detail		 Chr4:116497492 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 816 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219946117
MGI SNP Detail		 Chr4:116497495 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 813 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586038772
MGI SNP Detail		 Chr4:116497496 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 812 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580508844
MGI SNP Detail		 Chr4:116497527 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 781 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A
rs237462677
MGI SNP Detail		 Chr4:116497556 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 752 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G
rs258044608
MGI SNP Detail		 Chr4:116497667 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 641 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T
rs232063106
MGI SNP Detail		 Chr4:116497695 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 613 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A T T A A A A A A A A A A A A T A A A A A A A A A A A
rs248327783
MGI SNP Detail		 Chr4:116497765 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 543 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G G G G G G G G G A G G G G G G G G G G G G
rs265825634
MGI SNP Detail		 Chr4:116497791 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 517 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228373270
MGI SNP Detail		 Chr4:116497850 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 458 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G A A G G G G G G G G G G G G A G G G G G G G G G G G G
rs243305337
MGI SNP Detail		 Chr4:116497868 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 440 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225116970
MGI SNP Detail		 Chr4:116498020 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 288 bp downstream
 SNP C/T C T
rs226804703
MGI SNP Detail		 Chr4:116498024 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 284 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs243704435
MGI SNP Detail		 Chr4:116498060 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 248 bp downstream
 SNP C/G C G
rs217130073
MGI SNP Detail		 Chr4:116498157 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 151 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T G G T T T T T T T T T T T T G T T T T T T T T T T T T
rs240395002
MGI SNP Detail		 Chr4:116498235 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 73 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261176608
MGI SNP Detail		 Chr4:116498526 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 201 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T C C T T T T T C T T T T T T C T T T T T T T C T T T T
rs218186628
MGI SNP Detail		 Chr4:116498576 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 251 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G A A G G G G G A G G G G G G A G G G G G G G A G G G G
rs230824111
MGI SNP Detail		 Chr4:116498613 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 288 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G T T G G G G G G G G G G G G T G G G G G G G T G G G G
rs248312059
MGI SNP Detail		 Chr4:116498643 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 318 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs32892567
MGI SNP Detail		 Chr4:116498671 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 346 bp upstream
 SNP A/G A G A G A G
rs237778877
MGI SNP Detail		 Chr4:116498720 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 395 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs263255421
MGI SNP Detail		 Chr4:116498836 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 511 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs224086815
MGI SNP Detail		 Chr4:116498849 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 524 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251262866
MGI SNP Detail		 Chr4:116498894 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 569 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs264029879
MGI SNP Detail		 Chr4:116498899 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 574 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228834060
MGI SNP Detail		 Chr4:116498908 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 583 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236897871
MGI SNP Detail		 Chr4:116498985 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 660 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs258047878
MGI SNP Detail		 Chr4:116499043 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 718 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225503139
MGI SNP Detail		 Chr4:116499046 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 721 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247068930
MGI SNP Detail		 Chr4:116499064 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 739 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217435908
MGI SNP Detail		 Chr4:116499071 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 746 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231944414
MGI SNP Detail		 Chr4:116499143 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 818 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13471537
MGI SNP Detail		 Chr4:116499154 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 829 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T C C T T T T T C T T T T T T C T T T T T T T T T T T T
rs218636040
MGI SNP Detail		 Chr4:116499219 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 894 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs230769550
MGI SNP Detail		 Chr4:116499365 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1040 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs248205713
MGI SNP Detail		 Chr4:116499524 Akr1a1 within coordinates of
Gm69034 within coordinates of
Rr84404 within coordinates of
Tssr42906 1199 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs214489243
MGI SNP Detail		 Chr4:116499648 Akr1a1 within coordinates of
Gm69034 within coordinates of
Rr84404 within coordinates of
Tssr42906 1323 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A
rs231533958
MGI SNP Detail		 Chr4:116499656 Akr1a1 within coordinates of
Gm69034 within coordinates of
Rr84404 within coordinates of
Tssr42906 1331 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259680475
MGI SNP Detail		 Chr4:116499657 Akr1a1 within coordinates of
Gm69034 within coordinates of
Rr84404 within coordinates of
Tssr42906 1332 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224034291
MGI SNP Detail		 Chr4:116500196 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1871 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C A A C C C C C A C C C C C C A C C C C C C C A C C C C
rs240221534
MGI SNP Detail		 Chr4:116500239 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1914 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C A A C C C C C A C C C C C C A C C C C C C C A C C C C
rs263722855
MGI SNP Detail		 Chr4:116500264 Akr1a1 within coordinates of
Gm69034 within coordinates of
Tssr42906 1939 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 67 of 67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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