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Mouse SNP Summary
Symbol
Name
ID 		Tssr43440
transcription start site region 43440
MGI:5971207

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Showing SNP(s) 1 - 71 of 71

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs27520820
MGI SNP Detail		 Chr4:128510422 Tlr12 within coordinates of
Tssr43440 1999 bp downstream
 SNP A/G G G G A G G G G G G G A G G A G G G
rs27520819
MGI SNP Detail		 Chr4:128510647 Tlr12 within coordinates of
Tssr43440 1774 bp downstream
 SNP A/G A A G A G A G G G A G A G A A G G G
rs27520818
MGI SNP Detail		 Chr4:128510692 Tlr12 within coordinates of
Tssr43440 1729 bp downstream
 SNP A/G A A G A G A G A G G A G A G A A G G G
rs27520817
MGI SNP Detail		 Chr4:128510804 Tlr12 within coordinates of
Tssr43440 1617 bp downstream
 SNP G/T G G T G T G T G G T G G G G G G
rs27520816
MGI SNP Detail		 Chr4:128511128 Tlr12 within coordinates of
Tssr43440 1293 bp downstream
 SNP C/T C C C C C T C C C C C C C C
rs224224557
MGI SNP Detail		 Chr4:128511151 Tlr12 within coordinates of
Tssr43440 1270 bp downstream
 SNP G/T G T
rs27520815
MGI SNP Detail		 Chr4:128511214 Tlr12 within coordinates of
Tssr43440 1207 bp downstream
 SNP C/T C T C T C T C T T C C C C C C T
rs27520814
MGI SNP Detail		 Chr4:128511255 Tlr12 within coordinates of
Tssr43440 1166 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs27520813
MGI SNP Detail		 Chr4:128511283 Tlr12 within coordinates of
Tssr43440 1138 bp downstream
 SNP C/G C C C C C C C C G C C C G G C
rs27520812
MGI SNP Detail		 Chr4:128511536 Tlr12 within coordinates of
Tssr43440 885 bp downstream
 SNP A/G A A A A A G A G A A G G A
rs27520811
MGI SNP Detail		 Chr4:128511538 Tlr12 within coordinates of
Tssr43440 883 bp downstream
 SNP A/G G A G A G A A G G G G G A
rs27520810
MGI SNP Detail		 Chr4:128511621 Tlr12 within coordinates of
Tssr43440 800 bp downstream
 SNP A/G A A G A A A G A G A G A A G G G
rs27520809
MGI SNP Detail		 Chr4:128511714 Tlr12 within coordinates of
Tssr43440 707 bp downstream
 SNP C/T C C C C C C C C T T T C T C
rs216467641
MGI SNP Detail		 Chr4:128511772 Tlr12 within coordinates of
Tssr43440 649 bp downstream
 SNP A A A
rs237298317
MGI SNP Detail		 Chr4:128511835 Tlr12 within coordinates of
Tssr43440 586 bp downstream
 SNP C/G C G
rs262169527
MGI SNP Detail		 Chr4:128511863 Tlr12 within coordinates of
Tssr43440 558 bp downstream
 SNP C/T C T
rs218991152
MGI SNP Detail		 Chr4:128511931 Tlr12 within coordinates of
Tssr43440 490 bp downstream
 SNP G G G
rs236296720
MGI SNP Detail		 Chr4:128511935 Tlr12 within coordinates of
Tssr43440 486 bp downstream
 SNP C C C
rs253249500
MGI SNP Detail		 Chr4:128511989 Tlr12 within coordinates of
Tssr43440 432 bp downstream
 SNP A/G A G
rs27520808
MGI SNP Detail		 Chr4:128511994 Tlr12 within coordinates of
Tssr43440 427 bp downstream
 SNP C/T T T C C C C C T C C T
rs27520807
MGI SNP Detail		 Chr4:128512114 Tlr12 within coordinates of
Tssr43437 within coordinates of
Tssr43440 307 bp downstream
 SNP A/G G A A A A G A G G G G G A G G A
rs263279325
MGI SNP Detail		 Chr4:128512252 Tlr12 within coordinates of
Tssr43440 169 bp downstream
 SNP G/T T G
rs27520806
MGI SNP Detail		 Chr4:128512261 Tlr12 within coordinates of
Tssr43440 160 bp downstream
 SNP A/G G G G G G G G G A G A G G A G
rs27520805
MGI SNP Detail		 Chr4:128512283 Tlr12 within coordinates of
Tssr43440 138 bp downstream
 SNP C/T T T T T T T C T C T T C C T
rs27520804
MGI SNP Detail		 Chr4:128512294 Tlr12 within coordinates of
Tssr43440 127 bp downstream
 SNP A/G G G G G G G G A G A G A G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs27520803
MGI SNP Detail		 Chr4:128512317 Tlr12 within coordinates of
Tssr43440 104 bp downstream
 SNP A/T A A A A A A A T A T A A T T A
rs27520802
MGI SNP Detail		 Chr4:128512375 Tlr12 within coordinates of
Tssr43438 within coordinates of
Tssr43440 46 bp downstream
 SNP C/T C C C C C C T C T T T T T C T T C
rs216346854
MGI SNP Detail		 Chr4:128512510 Tssr43440 71 bp upstream
 SNP C/T T C
rs227836725
MGI SNP Detail		 Chr4:128512528 Tssr43440 89 bp upstream
 SNP C/T T C
rs256934597
MGI SNP Detail		 Chr4:128512596 Tssr43440 157 bp upstream
 SNP C/T T C
rs214471027
MGI SNP Detail		 Chr4:128512599 Tssr43440 160 bp upstream
 SNP A/G A G
rs237817204
MGI SNP Detail		 Chr4:128512684 Tssr43440 245 bp upstream
 SNP C/T C T
rs257341588
MGI SNP Detail		 Chr4:128512701 Tssr43440 262 bp upstream
 SNP A/C A C
rs27520801
MGI SNP Detail		 Chr4:128512787 Tssr43440 348 bp upstream
 SNP A/G A A A A A G G G G G A G A
rs27520800
MGI SNP Detail		 Chr4:128512801 Tssr43440 362 bp upstream
 SNP A/G A A A A G A A G A G A A G G A
rs27520799
MGI SNP Detail		 Chr4:128512834 Tssr43440 395 bp upstream
 SNP C/T T T T T T T T C T T C T T T
rs253528634
MGI SNP Detail		 Chr4:128513153 Tssr43440 714 bp upstream
 SNP A/G G A
rs221987409
MGI SNP Detail		 Chr4:128513287 Tssr43440 848 bp upstream
 SNP A/G G A
rs246482366
MGI SNP Detail		 Chr4:128513288 Tssr43440 849 bp upstream
 SNP G G G
rs262962763
MGI SNP Detail		 Chr4:128513308 Tssr43440 869 bp upstream
 SNP C/T C T
rs223627680
MGI SNP Detail		 Chr4:128513316 Tssr43440 877 bp upstream
 SNP C/T T C
rs27520798
MGI SNP Detail		 Chr4:128513334 Tssr43440 895 bp upstream
 SNP C/T T T T T T T T C T C T C C T
rs256617440
MGI SNP Detail		 Chr4:128513346 Tssr43440 907 bp upstream
 SNP A/G A G
rs27520797
MGI SNP Detail		 Chr4:128513351 Tssr43440 912 bp upstream
 SNP C/G G G G G C G C C C C C G C G
rs242704713
MGI SNP Detail		 Chr4:128513390 Tssr43440 951 bp upstream
 SNP A A A
rs260631450
MGI SNP Detail		 Chr4:128513467 Tssr43440 1028 bp upstream
 SNP A/G G A
rs228095614
MGI SNP Detail		 Chr4:128513516 Tssr43440 1077 bp upstream
 SNP A/T T A
rs27520796
MGI SNP Detail		 Chr4:128513597 Tssr43440 1158 bp upstream
 SNP C/T T T T T C C C C T C T
rs265208787
MGI SNP Detail		 Chr4:128513656 Tssr43440 1217 bp upstream
 SNP A/G A G
rs229588791
MGI SNP Detail		 Chr4:128513657 Tssr43440 1218 bp upstream
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs253789852
MGI SNP Detail		 Chr4:128513752 Tssr43440 1313 bp upstream
 SNP A/G G A
rs27520795
MGI SNP Detail		 Chr4:128513830 Tssr43440 1391 bp upstream
 SNP A/C A A A C A C A C A A A A
rs230269233
MGI SNP Detail		 Chr4:128513858 Tssr43440 1419 bp upstream
 SNP G/T T G
rs27520794
MGI SNP Detail		 Chr4:128513866 Tssr43440 1427 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs27520793
MGI SNP Detail		 Chr4:128513885 Tssr43440 1446 bp upstream
 SNP A/G A A A A A A A A G A G A A G G A
rs27520792
MGI SNP Detail		 Chr4:128513949 Tssr43440 1510 bp upstream
 SNP G/T G G G G G T G T T T T T G T T G
rs241624271
MGI SNP Detail		 Chr4:128514019 Tssr43440 1580 bp upstream
 SNP A/G A G
rs258717574
MGI SNP Detail		 Chr4:128514023 Tssr43440 1584 bp upstream
 SNP C/T T C
rs27520791
MGI SNP Detail		 Chr4:128514040 Tssr43440 1601 bp upstream
 SNP C/G G G G C C C C G C G
rs236335350
MGI SNP Detail		 Chr4:128514047 Tssr43440 1608 bp upstream
 SNP C/T T C
rs250632723
MGI SNP Detail		 Chr4:128514085 Tssr43440 1646 bp upstream
 SNP C/T C T
rs218013481
MGI SNP Detail		 Chr4:128514094 Tssr43440 1655 bp upstream
 SNP A/G A G
rs242624743
MGI SNP Detail		 Chr4:128514099 Tssr43440 1660 bp upstream
 SNP G G G
rs260563159
MGI SNP Detail		 Chr4:128514136 Tssr43440 1697 bp upstream
 SNP A/G G A
rs224939260
MGI SNP Detail		 Chr4:128514251 Tssr43440 1812 bp upstream
 SNP A/C A C
rs27520790
MGI SNP Detail		 Chr4:128514265 Tssr43440 1826 bp upstream
 SNP G/T T T T G G G T G T
rs262591284
MGI SNP Detail		 Chr4:128514293 Tssr43440 1854 bp upstream
 SNP A/G G A
rs229814330
MGI SNP Detail		 Chr4:128514319 Tssr43440 1880 bp upstream
 SNP G/T T G
rs249633729
MGI SNP Detail		 Chr4:128514335 Tssr43440 1896 bp upstream
 SNP A/G G A
rs253684158
MGI SNP Detail		 Chr4:128514341 Tssr43440 1902 bp upstream
 SNP A/T A T
rs27520789
MGI SNP Detail		 Chr4:128514417 Tssr43440 1978 bp upstream
 SNP A/G A A A A A A G G G G G A G G A
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Showing SNP(s) 1 - 71 of 71
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory