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Mouse SNP Summary
Symbol
Name
ID 		Tssr43540
transcription start site region 43540
MGI:5971307

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Showing SNP(s) 1 - 96 of 96

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MOLF/EiJ
NOD/ShiLtJ
NZB/BlNJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
rs50596094
MGI SNP Detail		 Chr4:129506060 Dcdc2b within coordinates of
Tssr43540 1994 bp downstream
 SNP A/G G A A A G
rs27503468
MGI SNP Detail		 Chr4:129506151 Dcdc2b within coordinates of
Tssr43540 1903 bp downstream
 SNP G/T T T T T T T T G T T G T G T T G G T
rs27503467
MGI SNP Detail		 Chr4:129506189 Dcdc2b within coordinates of
Tssr43540 1865 bp downstream
 SNP C/T T T T T T T T C T T C T C T T C C T
rs27503466
MGI SNP Detail		 Chr4:129506236 Dcdc2b within coordinates of
Tssr43540 1818 bp downstream
 SNP C/T T T T T T T T C T C T C T T C C T
rs27503465
MGI SNP Detail		 Chr4:129506268 Dcdc2b within coordinates of
Tssr43540 1786 bp downstream
 SNP A/G G G G G G G G A G G A G A G G A G
rs50118943
MGI SNP Detail		 Chr4:129506295 Dcdc2b within coordinates of
Tssr43540 1759 bp downstream
 SNP C/T C C C T
rs46947200
MGI SNP Detail		 Chr4:129506296 Dcdc2b within coordinates of
Tssr43540 1758 bp downstream
 SNP A/G A A A G
rs27503464
MGI SNP Detail		 Chr4:129506323 Dcdc2b within coordinates of
Tssr43540 1731 bp downstream
 SNP A/G G G G G G G G G G G A G A G G A A G
rs51880444
MGI SNP Detail		 Chr4:129506367 Dcdc2b within coordinates of
Tssr43540 1687 bp downstream
 SNP C C C C
rs46933260
MGI SNP Detail		 Chr4:129506522 Dcdc2b within coordinates of
Tssr43540 1532 bp downstream
 SNP A/C C C C C A
rs50231243
MGI SNP Detail		 Chr4:129506545 Dcdc2b within coordinates of
Tssr43540 1509 bp downstream
 SNP C/T T T T T C
rs27503463
MGI SNP Detail		 Chr4:129506608 Dcdc2b within coordinates of
Tssr43540 1446 bp downstream
 SNP C/T T T T T T T T C T T C T C T T C C T
rs27503462
MGI SNP Detail		 Chr4:129506625 Dcdc2b within coordinates of
Tssr43540 1429 bp downstream
 SNP C/T C C C C C C C C C C T C T C C C T C
rs27503461
MGI SNP Detail		 Chr4:129506654 Dcdc2b within coordinates of
Tssr43540 1400 bp downstream
 SNP A/G A A A A A A A A A A G A G A A A G A
rs50105335
MGI SNP Detail		 Chr4:129506699 Dcdc2b within coordinates of
Tssr43540 1355 bp downstream
 SNP C/T T T T T C
rs46558248
MGI SNP Detail		 Chr4:129506709 Dcdc2b within coordinates of
Tssr43540 1345 bp downstream
 SNP A/G A A A A G
rs27503460
MGI SNP Detail		 Chr4:129506763 Dcdc2b within coordinates of
Tssr43540 1291 bp downstream
 SNP A/G G G G G G G A G G G G G G G
rs27503459
MGI SNP Detail		 Chr4:129506855 Dcdc2b within coordinates of
Tssr43540 1199 bp downstream
 SNP G/T T T T T T T T T T T G T G T T T G T
rs46686427
MGI SNP Detail		 Chr4:129506888 Dcdc2b within coordinates of
Tssr43540 1166 bp downstream
 SNP C C C C
rs27503458
MGI SNP Detail		 Chr4:129506917 Dcdc2b within coordinates of
Tssr43540 1137 bp downstream
 SNP C/G C C C C G G
rs27503457
MGI SNP Detail		 Chr4:129506952 Dcdc2b within coordinates of
Tssr43540 1102 bp downstream
 SNP A/C C C C C C C C C C A C A C C A A C
rs50908506
MGI SNP Detail		 Chr4:129507066 Dcdc2b within coordinates of
Tssr43540 988 bp downstream
 SNP C/G C C C C G
rs108836108
MGI SNP Detail		 Chr4:129507106 Dcdc2b within coordinates of
Tssr43540 948 bp downstream
 SNP C C C C
rs47061740
MGI SNP Detail		 Chr4:129507129 Dcdc2b within coordinates of
Tssr43540 925 bp downstream
 SNP G G G G
rs48042909
MGI SNP Detail		 Chr4:129507137 Dcdc2b within coordinates of
Tssr43540 917 bp downstream
 SNP G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MOLF/EiJ
NOD/ShiLtJ
NZB/BlNJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
rs46223068
MGI SNP Detail		 Chr4:129507203 Dcdc2b within coordinates of
Tssr43540 851 bp downstream
 SNP C/T C C C C T
rs51609498
MGI SNP Detail		 Chr4:129507249 Dcdc2b within coordinates of
Tssr43540 805 bp downstream
 SNP G G G
rs50049370
MGI SNP Detail		 Chr4:129507319 Dcdc2b within coordinates of
Tssr43540 735 bp downstream
 SNP A/G G G G A
rs51481205
MGI SNP Detail		 Chr4:129507349 Dcdc2b within coordinates of
Tssr43540 705 bp downstream
 SNP C/G C C C G
rs257866516
MGI SNP Detail		 Chr4:129507386 Dcdc2b within coordinates of
Tssr43540 668 bp downstream
 SNP A/G G A
rs219092557
MGI SNP Detail		 Chr4:129507447 Dcdc2b within coordinates of
Tssr43540 607 bp downstream
 SNP C/T T C
rs51845741
MGI SNP Detail		 Chr4:129507495 Dcdc2b within coordinates of
Tssr43540 559 bp downstream
 SNP A/C A A A C
rs47097856
MGI SNP Detail		 Chr4:129507496 Dcdc2b within coordinates of
Tssr43540 558 bp downstream
 SNP C/T C C C T
rs27503456
MGI SNP Detail		 Chr4:129507565 Dcdc2b within coordinates of
Tssr43540 489 bp downstream
 SNP C/T T T T T T T T C T T C T C T T C C T
rs236911062
MGI SNP Detail		 Chr4:129507630 Dcdc2b within coordinates of
Tssr43540 424 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A G A
rs46246171
MGI SNP Detail		 Chr4:129507640 Dcdc2b within coordinates of
Tssr43540 414 bp downstream
 SNP T T T T
rs47821663
MGI SNP Detail		 Chr4:129507764 Dcdc2b within coordinates of
Tssr43540 290 bp downstream
 SNP C/T T T T T C
rs49759643
MGI SNP Detail		 Chr4:129507767 Dcdc2b within coordinates of
Tssr43540 287 bp downstream
 SNP C/T C C C C T
rs27503455
MGI SNP Detail		 Chr4:129507847 Dcdc2b within coordinates of
Tssr43540 207 bp downstream
 SNP A/G G G A A A G A G A G G A G A A G G G
rs27503454
MGI SNP Detail		 Chr4:129507861 Dcdc2b within coordinates of
Tssr43540 193 bp downstream
 SNP C/T T T T T T T T C T T C T C T T C C T
rs48254407
MGI SNP Detail		 Chr4:129507902 Dcdc2b within coordinates of
Tssr43540 152 bp downstream
 SNP A/G G G G G A
rs27503453
MGI SNP Detail		 Chr4:129508012 Dcdc2b within coordinates of
Tssr43540 42 bp downstream
 SNP A/G G G G G G G G G G G A G A G G A G
rs27503452
MGI SNP Detail		 Chr4:129508089 Tssr43540 16 bp upstream
 SNP C/G C C C C C C C C C G C G C C C G C
rs27503451
MGI SNP Detail		 Chr4:129508158 Tssr43540 85 bp upstream
 SNP A/C A A A A A A A A A A C A A A A C A
rs27503450
MGI SNP Detail		 Chr4:129508208 Tssr43540 135 bp upstream
 SNP C/T T T T T T T T C T T C T C T T C C T
rs27503449
MGI SNP Detail		 Chr4:129508231 Tssr43540 158 bp upstream
 SNP A/G G G G G G G G G G A G A G G A A G
rs27503448
MGI SNP Detail		 Chr4:129508276 Tssr43540 203 bp upstream
 SNP A/G G G G G G G G G G G A G A G G A A G
rs27503447
MGI SNP Detail		 Chr4:129508294 Tssr43540 221 bp upstream
 SNP C/T T T T T T T T T T T C T C T T C C T
rs27503446
MGI SNP Detail		 Chr4:129508359 Tssr43540 286 bp upstream
 SNP A/G A A A A A A A A G A G A A G G A
rs47963879
MGI SNP Detail		 Chr4:129508368 Tssr43540 295 bp upstream
 SNP C/T C C C C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MOLF/EiJ
NOD/ShiLtJ
NZB/BlNJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
rs47134624
MGI SNP Detail		 Chr4:129508415 Tssr43540 342 bp upstream
 SNP C/G G G G G C
rs27503445
MGI SNP Detail		 Chr4:129508418 Tssr43540 345 bp upstream
 SNP A/G A A A A A A G A G A A G G A
rs46304272
MGI SNP Detail		 Chr4:129508463 Tssr43540 390 bp upstream
 SNP T T T T
rs49037357
MGI SNP Detail		 Chr4:129508464 Tssr43540 391 bp upstream
 SNP T T T T
rs27503444
MGI SNP Detail		 Chr4:129508467 Tssr43540 394 bp upstream
 SNP A/C C C C C C C A A C C C
rs50307833
MGI SNP Detail		 Chr4:129508508 Tssr43540 435 bp upstream
 SNP G G G G
rs27503443
MGI SNP Detail		 Chr4:129508515 Tssr43540 442 bp upstream
 SNP A/G A A A A A A G A G A G G A
rs48355534
MGI SNP Detail		 Chr4:129508581 Tssr43540 508 bp upstream
 SNP C/T T T T T C
rs213173553
MGI SNP Detail		 Chr4:129508616 Tssr43540 543 bp upstream
 SNP A/T A A A A A A A A T A A A A A A A A A A A
rs229881583
MGI SNP Detail		 Chr4:129508622 Tssr43540 549 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T
rs254896813
MGI SNP Detail		 Chr4:129508625 Tssr43540 552 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G A G G G
rs222314619
MGI SNP Detail		 Chr4:129508661 Tssr43540 588 bp upstream
 SNP C/T T T T T T T T T C T T T T T T T T T T T
rs234484120
MGI SNP Detail		 Chr4:129508679 Tssr43540 606 bp upstream
 SNP A/T A A A A A A A A T T A A A A A A T A A T
rs262766661
MGI SNP Detail		 Chr4:129508701 Tssr43540 628 bp upstream
 SNP C/T C C C C C C C C T C C C C C C C C C C C
rs223184487
MGI SNP Detail		 Chr4:129508705 Tssr43540 632 bp upstream
 SNP A/G G G G G G G G G A G G G G G G G G G G G
rs246227011
MGI SNP Detail		 Chr4:129508756 Tssr43540 683 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A
rs583581118
MGI SNP Detail		 Chr4:129508766 Tssr43540 693 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T
rs586915272
MGI SNP Detail		 Chr4:129508767 Tssr43540 694 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C
rs581002421
MGI SNP Detail		 Chr4:129508784 Tssr43540 711 bp upstream
 SNP A/C A A A A A A A A C A A A A A A A A A A
rs583749526
MGI SNP Detail		 Chr4:129508786 Tssr43540 713 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C
rs218258843
MGI SNP Detail		 Chr4:129508801 Tssr43540 728 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A
rs47380586
MGI SNP Detail		 Chr4:129509118 Iqcc within coordinates of
Tssr43540 1045 bp upstream
 SNP G G G
rs51514333
MGI SNP Detail		 Chr4:129509145 Iqcc within coordinates of
Tssr43540 1072 bp upstream
 SNP A A A
rs51129512
MGI SNP Detail		 Chr4:129509158 Iqcc within coordinates of
Tssr43540 1085 bp upstream
 SNP A A A
rs45836395
MGI SNP Detail		 Chr4:129509165 Iqcc within coordinates of
Tssr43540 1092 bp upstream
 SNP A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MOLF/EiJ
NOD/ShiLtJ
NZB/BlNJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
rs51493241
MGI SNP Detail		 Chr4:129509247 Iqcc within coordinates of
Tssr43540 1174 bp upstream
 SNP C/T C C C T
rs51344966
MGI SNP Detail		 Chr4:129509307 Iqcc within coordinates of
Tssr43540 1234 bp upstream
 SNP A A A A
rs47201561
MGI SNP Detail		 Chr4:129509316 Iqcc within coordinates of
Tssr43540 1243 bp upstream
 SNP G G G
rs49265114
MGI SNP Detail		 Chr4:129509319 Iqcc within coordinates of
Tssr43540 1246 bp upstream
 SNP G G G
rs47891407
MGI SNP Detail		 Chr4:129509365 Iqcc within coordinates of
Tssr43540 1292 bp upstream
 SNP A/T A A A T
rs47395449
MGI SNP Detail		 Chr4:129509368 Iqcc within coordinates of
Tssr43540 1295 bp upstream
 SNP A/G A A A A G
rs50325238
MGI SNP Detail		 Chr4:129509457 Iqcc within coordinates of
Tssr43540 1384 bp upstream
 SNP A/T T A
rs50171311
MGI SNP Detail		 Chr4:129509544 Iqcc within coordinates of
Tssr43540 1471 bp upstream
 SNP C/T C C C C T
rs48175813
MGI SNP Detail		 Chr4:129509549 Iqcc within coordinates of
Tssr43540 1476 bp upstream
 SNP A/G A A A A G
rs49218732
MGI SNP Detail		 Chr4:129509588 Iqcc within coordinates of
Tssr43540 1515 bp upstream
 SNP A/G G A
rs46490570
MGI SNP Detail		 Chr4:129509622 Iqcc within coordinates of
Tssr43540 1549 bp upstream
 SNP C/G G C
rs49089214
MGI SNP Detail		 Chr4:129509662 Iqcc within coordinates of
Tssr43540 1589 bp upstream
 SNP C/T T T T C
rs46831166
MGI SNP Detail		 Chr4:129509664 Iqcc within coordinates of
Tssr43540 1591 bp upstream
 SNP C/G C C C G
rs45972310
MGI SNP Detail		 Chr4:129509692 Iqcc within coordinates of
Tssr43540 1619 bp upstream
 SNP G G G
rs31831841
MGI SNP Detail		 Chr4:129509722 Iqcc within coordinates of
Tssr43540 1649 bp upstream
 SNP A/T A A T
rs46231423
MGI SNP Detail		 Chr4:129509851 Iqcc within coordinates of
Tssr43540 1778 bp upstream
 SNP T T T
rs27503442
MGI SNP Detail		 Chr4:129509957 Iqcc within coordinates of
Tssr43540 1884 bp upstream
 SNP C/G C C C C C C G C C G C G C C G G C
rs252225140
MGI SNP Detail		 Chr4:129510010 Iqcc within coordinates of
Tssr43540 1937 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C
rs265290436
MGI SNP Detail		 Chr4:129510034 Iqcc within coordinates of
Tssr43540 1961 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C
rs229439075
MGI SNP Detail		 Chr4:129510035 Iqcc within coordinates of
Tssr43540 1962 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C
rs27503441
MGI SNP Detail		 Chr4:129510053 Iqcc within coordinates of
Tssr43540 1980 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
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Showing SNP(s) 1 - 96 of 96
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory