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Mouse SNP Summary
Symbol
Name
ID 		Tssr43836
transcription start site region 43836
MGI:5971603

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254966379
MGI SNP Detail		 Chr4:133692535 Hmgn2 within coordinates of
Tssr43836 1970 bp downstream
 SNP C/T T C C C C C T C C T T C T C C T C
rs586261832
MGI SNP Detail		 Chr4:133692633 Hmgn2 within coordinates of
Tssr43836 1872 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223914230
MGI SNP Detail		 Chr4:133692732 Hmgn2 within coordinates of
Tssr43836 1773 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254761640
MGI SNP Detail		 Chr4:133692734 Hmgn2 within coordinates of
Tssr43836 1771 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs232471004
MGI SNP Detail		 Chr4:133693021 Hmgn2 within coordinates of
Tssr43836 1484 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27574257
MGI SNP Detail		 Chr4:133693091 Hmgn2 within coordinates of
Tssr43836 1414 bp downstream
 SNP A/C C C A A C C A C C C C C A C C C C C C
rs580349742
MGI SNP Detail		 Chr4:133693189 Hmgn2 within coordinates of
Tssr43836 1316 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214574631
MGI SNP Detail		 Chr4:133693319 Hmgn2 within coordinates of
Tssr43836 1186 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231496230
MGI SNP Detail		 Chr4:133693368 Hmgn2 within coordinates of
Tssr43836 1137 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250349415
MGI SNP Detail		 Chr4:133693398 Hmgn2 within coordinates of
Tssr43836 1107 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32624994
MGI SNP Detail		 Chr4:133693535 Hmgn2 within coordinates of
Tssr43836 970 bp downstream
 SNP C/T C C T C C C
rs32178428
MGI SNP Detail		 Chr4:133693543 Hmgn2 within coordinates of
Tssr43836 962 bp downstream
 SNP A/G G A G G A G
rs260265353
MGI SNP Detail		 Chr4:133693625 Hmgn2 within coordinates of
Tssr43836 880 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224740193
MGI SNP Detail		 Chr4:133693654 Hmgn2 within coordinates of
Tssr43836 851 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244789099
MGI SNP Detail		 Chr4:133693662 Hmgn2 within coordinates of
Tssr43836 843 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32036128
MGI SNP Detail		 Chr4:133693671 Hmgn2 within coordinates of
Tssr43836 834 bp downstream
 SNP G/T T G G T G T
rs219226833
MGI SNP Detail		 Chr4:133693709 Hmgn2 within coordinates of
Tssr43836 796 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32518706
MGI SNP Detail		 Chr4:133693802 Hmgn2 within coordinates of
Tssr43836 703 bp downstream
 SNP A/G G A
rs32108174
MGI SNP Detail		 Chr4:133693803 Hmgn2 within coordinates of
Tssr43836 702 bp downstream
 SNP A/G G A
rs32234601
MGI SNP Detail		 Chr4:133693812 Hmgn2 within coordinates of
Tssr43836 693 bp downstream
 SNP A/G G G A
rs13459995
MGI SNP Detail		 Chr4:133693894 Hmgn2 within coordinates of
Tssr43836 611 bp downstream
 SNP C C C
rs32615334
MGI SNP Detail		 Chr4:133693959 Hmgn2 within coordinates of
Tssr43836 546 bp downstream
 SNP A/T T A T T T
rs32592174
MGI SNP Detail		 Chr4:133694030 Hmgn2 within coordinates of
Tssr43836 475 bp downstream
 SNP A/G A G A A A
rs32826030
MGI SNP Detail		 Chr4:133694049 Hmgn2 within coordinates of
Tssr43836 456 bp downstream
 SNP A/G G A G G G
rs233138946
MGI SNP Detail		 Chr4:133694064 Hmgn2 within coordinates of
Tssr43836 441 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33012668
MGI SNP Detail		 Chr4:133694089 Hmgn2 within coordinates of
Tssr43836 416 bp downstream
 SNP C/T C T T T
rs214560780
MGI SNP Detail		 Chr4:133694189 Hmgn2 within coordinates of
Tssr43836 316 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225992886
MGI SNP Detail		 Chr4:133694243 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Tssr43836 262 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244138569
MGI SNP Detail		 Chr4:133694322 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Tssr43836 183 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs211911696
MGI SNP Detail		 Chr4:133694370 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Tssr43836 135 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240200986
MGI SNP Detail		 Chr4:133694409 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Tssr43836 96 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51020329
MGI SNP Detail		 Chr4:133694469 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr398563 within coordinates of
Tssr43836 36 bp downstream
 SNP G G G
rs216658765
MGI SNP Detail		 Chr4:133694483 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr398563 within coordinates of
Tssr43836 22 bp downstream
 SNP A/G A A G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G G
rs239569661
MGI SNP Detail		 Chr4:133694538 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr398563 within coordinates of
Tssr43836 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45693473
MGI SNP Detail		 Chr4:133694675 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr398563 within coordinates of
Tssr43836 137 bp upstream
 SNP A/G G G A A G G G G G A G G G G G G G A A G G G G G G G A G G G G G G G G G G G A G G G G G G G G G
rs219169519
MGI SNP Detail		 Chr4:133694724 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr398563 within coordinates of
Tssr43836 186 bp upstream
 SNP A/G G A A G G G G G A G G G G G G A A G G G G G G G A G G G G G G G G G G G A G G G G G G G G G
rs247981445
MGI SNP Detail		 Chr4:133694990 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr601512 within coordinates of
Tssr43836 452 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220384253
MGI SNP Detail		 Chr4:133694994 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr601512 within coordinates of
Tssr43836 456 bp upstream
 SNP C/T T T T T T T T T T T T T T T C C C C C C T T C T T T T C C T T T C T T C C T T T T T T T T T T C C T T T
rs248648687
MGI SNP Detail		 Chr4:133695006 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr601512 within coordinates of
Tssr43836 468 bp upstream
 SNP C/G C C C C C C C C C C C C G G G G C C C C C C C C G G C C C G C C G G C C C C C C C C C C C G C C C
rs266011310
MGI SNP Detail		 Chr4:133695019 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr601512 within coordinates of
Tssr43836 481 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs581118138
MGI SNP Detail		 Chr4:133695071 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr601512 within coordinates of
Tssr43836 533 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs225377256
MGI SNP Detail		 Chr4:133695074 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr601512 within coordinates of
Tssr43836 536 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs240584883
MGI SNP Detail		 Chr4:133695079 Cpgi15020 within coordinates of
Hmgn2 within coordinates of
Rr601512 within coordinates of
Tssr43836 541 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258438169
MGI SNP Detail		 Chr4:133695381 Cpgi15020 within coordinates of
Rr601512 within coordinates of
Tssr43836 843 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs225870672
MGI SNP Detail		 Chr4:133695471 Cpgi15020 within coordinates of
Rr601512 within coordinates of
Tssr43836 933 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227174135
MGI SNP Detail		 Chr4:133695477 Cpgi15020 within coordinates of
Rr601512 within coordinates of
Tssr43836 939 bp upstream
 SNP G/T T G
rs261630723
MGI SNP Detail		 Chr4:133695557 Cpgi15020 within coordinates of
Rr601512 within coordinates of
Tssr43836 1019 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs234784939
MGI SNP Detail		 Chr4:133695658 Cpgi15020 within coordinates of
Rr601512 within coordinates of
Tssr43836 1120 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32109026
MGI SNP Detail		 Chr4:133695741 Cpgi15020 within coordinates of
Rr601512 within coordinates of
Tssr43836 1203 bp upstream
 SNP C/T C C T C C C
rs217121040
MGI SNP Detail		 Chr4:133695822 Cpgi15020 within coordinates of
Tssr43836 1284 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31785976
MGI SNP Detail		 Chr4:133695846 Cpgi15020 within coordinates of
Tssr43836 1308 bp upstream
 SNP A/T A T A A A
rs244256665
MGI SNP Detail		 Chr4:133695935 Cpgi15020 within coordinates of
Tssr43836 1397 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213323910
MGI SNP Detail		 Chr4:133695941 Cpgi15020 within coordinates of
Tssr43836 1403 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32650441
MGI SNP Detail		 Chr4:133696060 Cpgi15020 within coordinates of
Rr601513 within coordinates of
Tssr43836 1522 bp upstream
 SNP A/G G A G G
rs32127357
MGI SNP Detail		 Chr4:133696117 Cpgi15020 within coordinates of
Rr601513 within coordinates of
Tssr43836 1579 bp upstream
 SNP G/T G G T G T G
rs32869097
MGI SNP Detail		 Chr4:133696139 Cpgi15020 within coordinates of
Rr601513 within coordinates of
Tssr43836 1601 bp upstream
 SNP A/C A A C A C A
rs243385155
MGI SNP Detail		 Chr4:133696202 Cpgi15020 within coordinates of
Rr601513 within coordinates of
Tssr43836 1664 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260514442
MGI SNP Detail		 Chr4:133696266 Cpgi15020 within coordinates of
Rr601513 within coordinates of
Tssr43836 1728 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs225635157
MGI SNP Detail		 Chr4:133696282 Rr601513 within coordinates of
Tssr43836 1744 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240861479
MGI SNP Detail		 Chr4:133696284 Rr601513 within coordinates of
Tssr43836 1746 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51170985
MGI SNP Detail		 Chr4:133696287 Rr601513 within coordinates of
Tssr43836 1749 bp upstream
 SNP T T T T T T
rs219596910
MGI SNP Detail		 Chr4:133696288 Rr601513 within coordinates of
Tssr43836 1750 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238142846
MGI SNP Detail		 Chr4:133696357 Dhdds within coordinates of
Rr601513 within coordinates of
Tssr43836 1819 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32029755
MGI SNP Detail		 Chr4:133696383 Dhdds within coordinates of
Rr601513 within coordinates of
Tssr43836 1845 bp upstream
 SNP A/C C C A C C C
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory