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Mouse SNP Summary
Symbol
Name
ID
Tssr43947
transcription start site region 43947
MGI:5971714

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27543367
MGI SNP Detail
Chr4:134652777 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr39591 within coordinates of
Tssr43947 1902 bp downstream
SNP A/G A A A A A A A A A A G A
rs250810175
MGI SNP Detail
Chr4:134652794 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 1885 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219702425
MGI SNP Detail
Chr4:134652827 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 1852 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236971843
MGI SNP Detail
Chr4:134653340 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 1339 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs13470103
MGI SNP Detail
Chr4:134653393 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 1286 bp downstream
SNP C/T C T
rs254188532
MGI SNP Detail
Chr4:134653676 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 1003 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227359201
MGI SNP Detail
Chr4:134653779 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 900 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27543366
MGI SNP Detail
Chr4:134653789 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 890 bp downstream
SNP C/T T T C T C C T T C C C T T C T
rs265765989
MGI SNP Detail
Chr4:134653790 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 889 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46113177
MGI SNP Detail
Chr4:134653825 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 854 bp downstream
SNP A/G A G G
rs245807832
MGI SNP Detail
Chr4:134653840 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 839 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257474604
MGI SNP Detail
Chr4:134653861 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 818 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224992919
MGI SNP Detail
Chr4:134653886 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr43947 793 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs584880365
MGI SNP Detail
Chr4:134653992 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr39594 within coordinates of
Tssr43947 687 bp downstream
SNP A/T T T T T T T T T T T T T T T T T A T T T T T T A T T T T T T T T T T T T T T T T T T T
rs243400473
MGI SNP Detail
Chr4:134653993 Rr100260 within coordinates of
Rsrp1 within coordinates of
Tssr39594 within coordinates of
Tssr43947 686 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs13470100
MGI SNP Detail
Chr4:134654070 Rsrp1 within coordinates of
Tssr43947 609 bp downstream
SNP A/G G G A A G A G A A G G A A A G A G A A A A A A G G
rs27543365
MGI SNP Detail
Chr4:134654564 Rr100261 within coordinates of
Rsrp1 within coordinates of
Tssr43947 115 bp downstream
SNP C/T C C C C C C C C T T T C C C
rs252882980
MGI SNP Detail
Chr4:134654570 Rr100261 within coordinates of
Rsrp1 within coordinates of
Tssr43947 109 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215916650
MGI SNP Detail
Chr4:134654595 Rr100261 within coordinates of
Rsrp1 within coordinates of
Tssr43947 84 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231804538
MGI SNP Detail
Chr4:134654596 Rr100261 within coordinates of
Rsrp1 within coordinates of
Tssr43947 83 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249420099
MGI SNP Detail
Chr4:134654748 Tssr43947 66 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27543364
MGI SNP Detail
Chr4:134654783 Tssr43947 101 bp upstream
SNP C/G C C C C C C C C C G G G C C C
rs13470098
MGI SNP Detail
Chr4:134654865 Tssr43947 183 bp upstream
SNP A/G G A
rs231077031
MGI SNP Detail
Chr4:134654966 Tssr43947 284 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs248404222
MGI SNP Detail
Chr4:134654974 Tssr43947 292 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227006393
MGI SNP Detail
Chr4:134655066 Tssr43947 384 bp upstream
SNP C/T T T T T T C T T T T T T C C T T T T T C T T C T T T T C C T T T T C T T C C T T T T T T T C T T C C T T T
rs250527359
MGI SNP Detail
Chr4:134655147 Tssr43947 465 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27543363
MGI SNP Detail
Chr4:134655222 Tssr43947 540 bp upstream
SNP C/T C C T T C T C C C C C T C C C T C
rs224425028
MGI SNP Detail
Chr4:134655242 Tssr43947 560 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239783945
MGI SNP Detail
Chr4:134655280 Tssr43947 598 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32239101
MGI SNP Detail
Chr4:134655367 Tssr43947 685 bp upstream
SNP C/G C C G C C G G
rs224938249
MGI SNP Detail
Chr4:134655379 Tssr43947 697 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs27543362
MGI SNP Detail
Chr4:134655383 Tssr43947 701 bp upstream
SNP A/C A A C A A C A C A A C C C A A C A
rs266138046
MGI SNP Detail
Chr4:134655415 Tssr43947 733 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578767414
MGI SNP Detail
Chr4:134655495 Tssr43947 813 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32928824
MGI SNP Detail
Chr4:134655498 Tssr43947 816 bp upstream
SNP A/G A A G A A G A
rs258103915
MGI SNP Detail
Chr4:134655506 Tssr43947 824 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215356432
MGI SNP Detail
Chr4:134655514 Tssr43947 832 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225905932
MGI SNP Detail
Chr4:134655549 Tssr43947 867 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27543361
MGI SNP Detail
Chr4:134655564 Tssr43947 882 bp upstream
SNP C/T T T T T T T T C C T T T
rs212591690
MGI SNP Detail
Chr4:134655591 Tssr43947 909 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229674307
MGI SNP Detail
Chr4:134655633 Tssr43947 951 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255824251
MGI SNP Detail
Chr4:134655656 Tssr43947 974 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32247579
MGI SNP Detail
Chr4:134655683 Tssr43947 1001 bp upstream
SNP G/T G G T G G T G
rs27543360
MGI SNP Detail
Chr4:134655749 Tssr43947 1067 bp upstream
SNP A/G G G A A G A G G G A A G G A G
rs263540602
MGI SNP Detail
Chr4:134655752 Tssr43947 1070 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221154545
MGI SNP Detail
Chr4:134655768 Tssr43947 1086 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220782636
MGI SNP Detail
Chr4:134655770 Tssr43947 1088 bp upstream
SNP C/T C T
rs27543359
MGI SNP Detail
Chr4:134655789 Tssr43947 1107 bp upstream
SNP C/T T T C C T C T C T T C C C T T C T
rs582256257
MGI SNP Detail
Chr4:134655832 Tssr43947 1150 bp upstream
SNP C/G C C C C C G C C C C C C G G C C C C C C C C G C C C C G G C C C C G C C G G C C C C C C C G C C C G C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32716743
MGI SNP Detail
Chr4:134655881 Tssr43947 1199 bp upstream
SNP A/C C C A A A
rs264393133
MGI SNP Detail
Chr4:134655894 Tssr43947 1212 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234050699
MGI SNP Detail
Chr4:134655963 Tssr43947 1281 bp upstream
SNP A/G A A A A A G A A A A A A G G A A A A A G A A G A A A A G G A A A A G A A G G A A A A A A A G A A G G A A A
rs246243694
MGI SNP Detail
Chr4:134656074 Tssr43947 1392 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265479621
MGI SNP Detail
Chr4:134656186 Tssr43947 1504 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs46062635
MGI SNP Detail
Chr4:134656276 Tssr43947 1594 bp upstream
SNP A/T T A T
rs585329785
MGI SNP Detail
Chr4:134656309 Tssr43947 1627 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225871186
MGI SNP Detail
Chr4:134656333 Tssr43947 1651 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs243587791
MGI SNP Detail
Chr4:134656387 Tssr43947 1705 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212682677
MGI SNP Detail
Chr4:134656408 Tssr43947 1726 bp upstream
SNP A/G G G G G G A G G G G G A A G G G G G G G G A G G G G A A G G G G A G G A A G G G G G G G A G G A G G G
rs223149567
MGI SNP Detail
Chr4:134656436 Tssr43947 1754 bp upstream
SNP C/T T T T T T C T T T T T T C C T T T T T C T T C T T T T C C T T T T C T T C C T T T T T T T C T T C C T T T
rs31942753
MGI SNP Detail
Chr4:134656523 Tssr43947 1841 bp upstream
SNP A/G A G A G G
rs219757134
MGI SNP Detail
Chr4:134656618 Tssr43947 1936 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242594113
MGI SNP Detail
Chr4:134656619 Tssr43947 1937 bp upstream
SNP C/G C C C C C G C C C C C C G G C C C C C C C C G C C C C G G C C C C G C C G G C C C C C C C G C C C G C C C
rs222970095
MGI SNP Detail
Chr4:134656644 Tssr43947 1962 bp upstream
SNP C/T C T
rs259719095
MGI SNP Detail
Chr4:134656665 Tssr43947 1983 bp upstream
SNP G/T T T T T T G T T T T T T G G T T T T T G T T G T T T T G G T T T T G T T G G T T T T T T T G T T T G T T T
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Showing SNP(s) 1 - 66 of 66

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory