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Mouse SNP Summary
Symbol
Name
ID 		Tssr43965
transcription start site region 43965
MGI:5971732

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Showing SNP(s) 1 - 60 of 60

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs13470060
MGI SNP Detail		 Chr4:134944030 Clic4 within coordinates of
Tssr43965 1893 bp downstream
 SNP C/T C C C C C C C C T C C C C C C T T
rs27608497
MGI SNP Detail		 Chr4:134944166 Clic4 within coordinates of
Tssr43965 1757 bp downstream
 SNP C/G G G G G G G G G G C C G G G G
rs27608496
MGI SNP Detail		 Chr4:134944708 Clic4 within coordinates of
Tssr43965 1215 bp downstream
 SNP C/T C C T T C C C C C C T C C C C C C
rs27608495
MGI SNP Detail		 Chr4:134944801 Clic4 within coordinates of
Tssr43965 1122 bp downstream
 SNP A/G G G A A G G A G G G G A G G G G G G
rs27608494
MGI SNP Detail		 Chr4:134944825 Clic4 within coordinates of
Tssr43965 1098 bp downstream
 SNP A/G G G A A G G A G G G G A G G G G G G
rs27608493
MGI SNP Detail		 Chr4:134944851 Clic4 within coordinates of
Tssr43965 1072 bp downstream
 SNP A/G G A A G G A A G G A A A G G A G G
rs27608492
MGI SNP Detail		 Chr4:134944868 Clic4 within coordinates of
Tssr43965 1055 bp downstream
 SNP A/G A A G G A G A A A A G A A A A A A
rs27608491
MGI SNP Detail		 Chr4:134945013 Clic4 within coordinates of
Rr86243 within coordinates of
Tssr43965 910 bp downstream
 SNP C/T T T C C T T C C T T C C C T T C T T
rs50656752
MGI SNP Detail		 Chr4:134945171 Clic4 within coordinates of
Rr86243 within coordinates of
Tssr43965 752 bp downstream
 SNP A/G G A G A G
rs47114572
MGI SNP Detail		 Chr4:134945180 Clic4 within coordinates of
Rr86243 within coordinates of
Tssr43965 743 bp downstream
 SNP A/G A G G A
rs47178627
MGI SNP Detail		 Chr4:134945217 Clic4 within coordinates of
Tssr43965 706 bp downstream
 SNP C/T C T T C
rs49397415
MGI SNP Detail		 Chr4:134945219 Clic4 within coordinates of
Tssr43965 704 bp downstream
 SNP A/G A G G A
rs46995018
MGI SNP Detail		 Chr4:134945307 Clic4 within coordinates of
Tssr43965 616 bp downstream
 SNP A/T A T A T A
rs46764734
MGI SNP Detail		 Chr4:134945314 Clic4 within coordinates of
Tssr43965 609 bp downstream
 SNP G/T G T T G
rs46314430
MGI SNP Detail		 Chr4:134945317 Clic4 within coordinates of
Tssr43965 606 bp downstream
 SNP C/T T C C T
rs27608490
MGI SNP Detail		 Chr4:134945347 Clic4 within coordinates of
Tssr43965 576 bp downstream
 SNP A/G G G G G G G G G G A A G G A G
rs27608489
MGI SNP Detail		 Chr4:134945364 Clic4 within coordinates of
Tssr43965 559 bp downstream
 SNP A/G A G G A A G A A A A G A A A A A A
rs258308555
MGI SNP Detail		 Chr4:134945477 Clic4 within coordinates of
Tssr43965 446 bp downstream
 SNP G G G
rs219546320
MGI SNP Detail		 Chr4:134945496 Clic4 within coordinates of
Tssr43965 427 bp downstream
 SNP A A A
rs238633647
MGI SNP Detail		 Chr4:134945507 Clic4 within coordinates of
Tssr43965 416 bp downstream
 SNP C C C
rs27608488
MGI SNP Detail		 Chr4:134945561 Clic4 within coordinates of
Tssr43965 362 bp downstream
 SNP G/T T T G G T T T T T T T T T T T
rs27608487
MGI SNP Detail		 Chr4:134945576 Clic4 within coordinates of
Tssr43965 347 bp downstream
 SNP A/G G G G G G G A G G A A G G A G
rs27608486
MGI SNP Detail		 Chr4:134945610 Clic4 within coordinates of
Tssr43965 313 bp downstream
 SNP G/T T T T T G G G T T T T G T T T
rs6396722
MGI SNP Detail		 Chr4:134946051 Clic4 within coordinates of
Tssr43965 86 bp upstream
 SNP C/T C C C T C T C C C C T C C C
rs47070267
MGI SNP Detail		 Chr4:134946088 Clic4 within coordinates of
Tssr43965 123 bp upstream
 SNP A/G G A G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs27608485
MGI SNP Detail		 Chr4:134946170 Clic4 within coordinates of
Tssr43965 205 bp upstream
 SNP C/T T C C C C C C T C C C C T C T T
rs27608484
MGI SNP Detail		 Chr4:134946235 Clic4 within coordinates of
Tssr43965 270 bp upstream
 SNP A/T A A A A A A A A A A A A T A A
rs6397883
MGI SNP Detail		 Chr4:134946322 Clic4 within coordinates of
Tssr43965 357 bp upstream
 SNP C/T C C C C T T C T C C T C C C C T C C C C
rs6398394
MGI SNP Detail		 Chr4:134946358 Clic4 within coordinates of
Tssr43965 393 bp upstream
 SNP A/G G G G G G G G G A G G A A G G A G
rs27608483
MGI SNP Detail		 Chr4:134946521 Clic4 within coordinates of
Tssr43965 556 bp upstream
 SNP A/G G G G G A A G A G A G G G G A G G G G
rs27608482
MGI SNP Detail		 Chr4:134946564 Clic4 within coordinates of
Tssr43965 599 bp upstream
 SNP A/T A A T T T T T T T T T A A T T A T
rs27608481
MGI SNP Detail		 Chr4:134946610 Clic4 within coordinates of
Tssr43965 645 bp upstream
 SNP A/G A A G G G G G G G G G G G G G G G
rs46852752
MGI SNP Detail		 Chr4:134946675 Clic4 within coordinates of
Tssr43965 710 bp upstream
 SNP C/T C T C
rs32235068
MGI SNP Detail		 Chr4:134946691 Clic4 within coordinates of
Tssr43965 726 bp upstream
 SNP C/T C C C T T
rs46834133
MGI SNP Detail		 Chr4:134946714 Clic4 within coordinates of
Tssr43965 749 bp upstream
 SNP A/G G A G
rs27608480
MGI SNP Detail		 Chr4:134946726 Clic4 within coordinates of
Tssr43965 761 bp upstream
 SNP A/G A A G G G G G G G G G G G G G G G
rs47602635
MGI SNP Detail		 Chr4:134946763 Clic4 within coordinates of
Tssr43965 798 bp upstream
 SNP A/C A C C A
rs49495161
MGI SNP Detail		 Chr4:134946776 Clic4 within coordinates of
Tssr43965 811 bp upstream
 SNP A/T A T A
rs48599711
MGI SNP Detail		 Chr4:134946785 Clic4 within coordinates of
Tssr43965 820 bp upstream
 SNP A/G G A
rs49174366
MGI SNP Detail		 Chr4:134946806 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 841 bp upstream
 SNP G/T G T T G
rs51378595
MGI SNP Detail		 Chr4:134947007 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1042 bp upstream
 SNP C/T C T C T T
rs27608479
MGI SNP Detail		 Chr4:134947090 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1125 bp upstream
 SNP C/T C C T T T T C C T T C T
rs50687115
MGI SNP Detail		 Chr4:134947099 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1134 bp upstream
 SNP C/T T C C
rs27608478
MGI SNP Detail		 Chr4:134947128 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1163 bp upstream
 SNP C/T T T T T C C T C C C T T C C T C C
rs27608477
MGI SNP Detail		 Chr4:134947151 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1186 bp upstream
 SNP A/G A A A A A G A A A A A A G G
rs51465820
MGI SNP Detail		 Chr4:134947173 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1208 bp upstream
 SNP A/G A G A G A
rs52100722
MGI SNP Detail		 Chr4:134947206 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1241 bp upstream
 SNP C/T T C T C T
rs52215531
MGI SNP Detail		 Chr4:134947228 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1263 bp upstream
 SNP A/G A G A G A
rs52211830
MGI SNP Detail		 Chr4:134947283 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1318 bp upstream
 SNP A/T T A T A T
rs52300625
MGI SNP Detail		 Chr4:134947294 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1329 bp upstream
 SNP C/T C T C T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
CZECHII/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs52284711
MGI SNP Detail		 Chr4:134947305 Clic4 within coordinates of
Rr86244 within coordinates of
Tssr43965 1340 bp upstream
 SNP A/T A T A T A
rs27608476
MGI SNP Detail		 Chr4:134947402 Clic4 within coordinates of
Rr102925 within coordinates of
Rr86244 within coordinates of
Tssr43965 1437 bp upstream
 SNP C/T C C C C T T C C T T C C C T T C T T
rs45775388
MGI SNP Detail		 Chr4:134947449 Clic4 within coordinates of
Rr102925 within coordinates of
Rr86244 within coordinates of
Tssr43965 1484 bp upstream
 SNP A/G G A G A
rs46583649
MGI SNP Detail		 Chr4:134947451 Clic4 within coordinates of
Rr102925 within coordinates of
Rr86244 within coordinates of
Tssr43965 1486 bp upstream
 SNP A/C A C A C
rs27608475
MGI SNP Detail		 Chr4:134947513 Clic4 within coordinates of
Rr102925 within coordinates of
Rr86244 within coordinates of
Tssr43965 1548 bp upstream
 SNP A/G G A A G G A A G G G A G G G G G G
rs27608474
MGI SNP Detail		 Chr4:134947565 Clic4 within coordinates of
Rr102925 within coordinates of
Rr86244 within coordinates of
Tssr43965 1600 bp upstream
 SNP C/G G G C C G G C G G G G C G G G G G G
rs27608473
MGI SNP Detail		 Chr4:134947722 Clic4 within coordinates of
Rr102925 within coordinates of
Tssr43965 1757 bp upstream
 SNP C/T C C C T T C C T T C C C T T C T T
rs27608472
MGI SNP Detail		 Chr4:134947819 Clic4 within coordinates of
Rr102925 within coordinates of
Tssr43965 1854 bp upstream
 SNP A/T T T A A T T A T T T A T T T T T T
rs27608471
MGI SNP Detail		 Chr4:134947925 Clic4 within coordinates of
Rr102925 within coordinates of
Tssr43965 1960 bp upstream
 SNP A/G G G A A A A A A G G A A G A
rs27608470
MGI SNP Detail		 Chr4:134947957 Clic4 within coordinates of
Rr102925 within coordinates of
Tssr43965 1992 bp upstream
 SNP A/G G G A A A A A A A A G G A A G A
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Showing SNP(s) 1 - 60 of 60
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory