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Mouse SNP Summary
Symbol
Name
ID
Tssr44829
transcription start site region 44829
MGI:5972596

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32850324
MGI SNP Detail
Chr4:152387888 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1840 bp downstream
SNP C/T T T T T T T C T T T T T T T T
rs32637018
MGI SNP Detail
Chr4:152387894 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1834 bp downstream
SNP A/G A A G G G G G G G G G G G G G A
rs32850329
MGI SNP Detail
Chr4:152388005 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1723 bp downstream
SNP C/T C C C C C C C C C C T C C T C
rs263321307
MGI SNP Detail
Chr4:152388021 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1707 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263126900
MGI SNP Detail
Chr4:152388287 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1441 bp downstream
SNP A A A
rs32850332
MGI SNP Detail
Chr4:152388441 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1287 bp downstream
SNP A/G A G G G G G G G G G A A G A A A A
rs32851095
MGI SNP Detail
Chr4:152388491 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1237 bp downstream
SNP G/T T T T T T T G T T T T T T T T
rs250558926
MGI SNP Detail
Chr4:152388580 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1148 bp downstream
SNP A A A
rs213659006
MGI SNP Detail
Chr4:152388587 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1141 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32851098
MGI SNP Detail
Chr4:152388591 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1137 bp downstream
SNP A/G A A A A A A G A A A G G A G G G A
rs244660588
MGI SNP Detail
Chr4:152388599 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1129 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213706844
MGI SNP Detail
Chr4:152388624 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1104 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32851101
MGI SNP Detail
Chr4:152388646 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 1082 bp downstream
SNP C/T T C C C C C C C C C T T C T T T T
rs32851834
MGI SNP Detail
Chr4:152388755 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 973 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs226579888
MGI SNP Detail
Chr4:152388785 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 943 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32851837
MGI SNP Detail
Chr4:152388789 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 939 bp downstream
SNP A/G A A A A A A G A A A A A A A A
rs256145351
MGI SNP Detail
Chr4:152388796 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 932 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242769054
MGI SNP Detail
Chr4:152388907 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 821 bp downstream
SNP A A A
rs32018141
MGI SNP Detail
Chr4:152388929 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 799 bp downstream
SNP G/T T T G G G G G G G G G G G G G G T
rs239672454
MGI SNP Detail
Chr4:152388985 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 743 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32851842
MGI SNP Detail
Chr4:152389008 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 720 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs216321541
MGI SNP Detail
Chr4:152389033 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 695 bp downstream
SNP G G G
rs221457398
MGI SNP Detail
Chr4:152389071 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 657 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240727884
MGI SNP Detail
Chr4:152389074 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 654 bp downstream
SNP C C C
rs32852645
MGI SNP Detail
Chr4:152389174 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 554 bp downstream
SNP A/G G G G G G G G G G G A A A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32852648
MGI SNP Detail
Chr4:152389177 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 551 bp downstream
SNP A/G G G G G G G G G G A A G
rs234132206
MGI SNP Detail
Chr4:152389235 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 493 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259570205
MGI SNP Detail
Chr4:152389282 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 446 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262082328
MGI SNP Detail
Chr4:152389299 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 429 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223906277
MGI SNP Detail
Chr4:152389339 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 389 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs244876002
MGI SNP Detail
Chr4:152389353 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 375 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32852651
MGI SNP Detail
Chr4:152389393 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 335 bp downstream
SNP A/G G G G G G G G G G G A G G A G
rs32852653
MGI SNP Detail
Chr4:152389401 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 327 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs252461240
MGI SNP Detail
Chr4:152389432 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 296 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs225316455
MGI SNP Detail
Chr4:152389445 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 283 bp downstream
SNP T T T
rs219377044
MGI SNP Detail
Chr4:152389490 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 238 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239660018
MGI SNP Detail
Chr4:152389531 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 197 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261474845
MGI SNP Detail
Chr4:152389548 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 180 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31926691
MGI SNP Detail
Chr4:152389582 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 146 bp downstream
SNP C/G/T T T C C C G G
rs32382929
MGI SNP Detail
Chr4:152389693 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 35 bp downstream
SNP A/G G G A A A A A A A A A A A A A A A G
rs32010696
MGI SNP Detail
Chr4:152389753 Gm70210 within coordinates of
Icmt within coordinates of
Tssr44829 13 bp upstream
SNP A/G A A G G G
rs221493187
MGI SNP Detail
Chr4:152389808 Icmt within coordinates of
Tssr44829 68 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs247361458
MGI SNP Detail
Chr4:152389823 Icmt within coordinates of
Tssr44829 83 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260634718
MGI SNP Detail
Chr4:152389869 Icmt within coordinates of
Tssr44829 129 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32124315
MGI SNP Detail
Chr4:152389939 Icmt within coordinates of
Tssr44829 199 bp upstream
SNP C/T T T C C C C C C C C C C C T
rs32853467
MGI SNP Detail
Chr4:152389995 Icmt within coordinates of
Tssr44829 255 bp upstream
SNP C/T C C C C C C C C C C T C C T C
rs254898153
MGI SNP Detail
Chr4:152390001 Icmt within coordinates of
Tssr44829 261 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs31913630
MGI SNP Detail
Chr4:152390031 Icmt within coordinates of
Tssr44829 291 bp upstream
SNP G/T G T T T G G
rs32853470
MGI SNP Detail
Chr4:152390161 Icmt within coordinates of
Tssr44829 421 bp upstream
SNP A/G G G G G G G G G G G A G G A G
rs255767846
MGI SNP Detail
Chr4:152390224 Icmt within coordinates of
Tssr44829 484 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32853473
MGI SNP Detail
Chr4:152390336 Icmt within coordinates of
Tssr44829 596 bp upstream
SNP G/T G G G G G G T G G G G G G G G
rs257394446
MGI SNP Detail
Chr4:152390346 Icmt within coordinates of
Tssr44829 606 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580159214
MGI SNP Detail
Chr4:152390401 Icmt within coordinates of
Tssr44829 661 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32220324
MGI SNP Detail
Chr4:152390468 Icmt within coordinates of
Tssr44829 728 bp upstream
SNP C/T C T T T
rs234326139
MGI SNP Detail
Chr4:152390546 Icmt within coordinates of
Tssr44829 806 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250041006
MGI SNP Detail
Chr4:152390565 Icmt within coordinates of
Tssr44829 825 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32854586
MGI SNP Detail
Chr4:152390639 Icmt within coordinates of
Tssr44829 899 bp upstream
SNP A/G A A A A A A G A A A G A A G A
rs32854589
MGI SNP Detail
Chr4:152390739 Icmt within coordinates of
Tssr44829 999 bp upstream
SNP C/T C C T T T T T C T T T C T T C C
rs251196229
MGI SNP Detail
Chr4:152390758 Icmt within coordinates of
Tssr44829 1018 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215929258
MGI SNP Detail
Chr4:152390786 Icmt within coordinates of
Tssr44829 1046 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237848454
MGI SNP Detail
Chr4:152390812 Icmt within coordinates of
Tssr44829 1072 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264053706
MGI SNP Detail
Chr4:152390854 Icmt within coordinates of
Tssr44829 1114 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225414567
MGI SNP Detail
Chr4:152390876 Icmt within coordinates of
Tssr44829 1136 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32854592
MGI SNP Detail
Chr4:152390892 Icmt within coordinates of
Tssr44829 1152 bp upstream
SNP A/G G A A A A A G A A A G A A G G
rs32855395
MGI SNP Detail
Chr4:152390921 Icmt within coordinates of
Tssr44829 1181 bp upstream
SNP A/G A A A A A A A A A A G A A G A
rs32855398
MGI SNP Detail
Chr4:152391020 Icmt within coordinates of
Tssr44829 1280 bp upstream
SNP A/G G G G G G G G G G G A G G A G
rs238610143
MGI SNP Detail
Chr4:152391135 Icmt within coordinates of
Tssr44829 1395 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32850035
MGI SNP Detail
Chr4:152391148 Icmt within coordinates of
Tssr44829 1408 bp upstream
SNP C/T C C C C C C C C C C T C C T C
rs225693117
MGI SNP Detail
Chr4:152391323 Icmt within coordinates of
Tssr44829 1583 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245768587
MGI SNP Detail
Chr4:152391363 Icmt within coordinates of
Tssr44829 1623 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs266165653
MGI SNP Detail
Chr4:152391382 Icmt within coordinates of
Tssr44829 1642 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs233153026
MGI SNP Detail
Chr4:152391399 Icmt within coordinates of
Tssr44829 1659 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs244451831
MGI SNP Detail
Chr4:152391426 Icmt within coordinates of
Tssr44829 1686 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256147378
MGI SNP Detail
Chr4:152391438 Icmt within coordinates of
Tssr44829 1698 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226721843
MGI SNP Detail
Chr4:152391636 Rnf207 within coordinates of
Tssr44829 1896 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244925950
MGI SNP Detail
Chr4:152391703 Rnf207 within coordinates of
Tssr44829 1963 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 76 of 76

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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