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Mouse SNP Summary
Symbol
Name
ID 		Tssr45214
transcription start site region 45214
MGI:5972981

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Showing SNP(s) 1 - 47 of 47

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262664953
MGI SNP Detail		 Chr5:16137888 Gm3510 within coordinates of
Tssr45214 1872 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229978049
MGI SNP Detail		 Chr5:16137915 Gm3510 within coordinates of
Tssr45214 1845 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs250944402
MGI SNP Detail		 Chr5:16137940 Gm3510 within coordinates of
Tssr45214 1820 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C C T C C C C
rs213181197
MGI SNP Detail		 Chr5:16138016 Gm3510 within coordinates of
Tssr45214 1744 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs230178952
MGI SNP Detail		 Chr5:16138138 Gm3510 within coordinates of
Tssr45214 1622 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249184934
MGI SNP Detail		 Chr5:16138251 Gm3510 within coordinates of
Tssr45214 1509 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs217044319
MGI SNP Detail		 Chr5:16138271 Gm3510 within coordinates of
Tssr45214 1489 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238746403
MGI SNP Detail		 Chr5:16138273 Gm3510 within coordinates of
Tssr45214 1487 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262956916
MGI SNP Detail		 Chr5:16138309 Gm3510 within coordinates of
Tssr45214 1451 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs223621243
MGI SNP Detail		 Chr5:16138352 Gm3510 within coordinates of
Tssr45214 1408 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs238324099
MGI SNP Detail		 Chr5:16138371 Gm3510 within coordinates of
Tssr45214 1389 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs256118943
MGI SNP Detail		 Chr5:16138390 Gm3510 within coordinates of
Tssr45214 1370 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs217857190
MGI SNP Detail		 Chr5:16138441 Gm3510 within coordinates of
Tssr45214 1319 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241502077
MGI SNP Detail		 Chr5:16138730 Gm3510 within coordinates of
Tssr45214 1030 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs258971263
MGI SNP Detail		 Chr5:16138743 Gm3510 within coordinates of
Tssr45214 1017 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs221451063
MGI SNP Detail		 Chr5:16138834 Gm3510 within coordinates of
Tssr45214 926 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs244748457
MGI SNP Detail		 Chr5:16138853 Gm3510 within coordinates of
Tssr45214 907 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs265201652
MGI SNP Detail		 Chr5:16138909 Gm3510 within coordinates of
Tssr45214 851 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229541929
MGI SNP Detail		 Chr5:16138990 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 770 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253786369
MGI SNP Detail		 Chr5:16139095 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 665 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs256997121
MGI SNP Detail		 Chr5:16139108 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 652 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224465171
MGI SNP Detail		 Chr5:16139120 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 640 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249097784
MGI SNP Detail		 Chr5:16139257 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 503 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs216996462
MGI SNP Detail		 Chr5:16139421 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 339 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs233603612
MGI SNP Detail		 Chr5:16139440 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 320 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252311067
MGI SNP Detail		 Chr5:16139778 Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215263677
MGI SNP Detail		 Chr5:16139886 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 101 bp downstream
 SNP G/T G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G T G G G G G G G G G G G
rs236327074
MGI SNP Detail		 Chr5:16139929 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 144 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs249079770
MGI SNP Detail		 Chr5:16139954 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 169 bp downstream
Tssr45216 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212303526
MGI SNP Detail		 Chr5:16140171 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 386 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G C G G G G G G C G G G G G G G C G G G G
rs235069542
MGI SNP Detail		 Chr5:16140296 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 511 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252567006
MGI SNP Detail		 Chr5:16140497 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 712 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224937247
MGI SNP Detail		 Chr5:16140540 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 755 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247798662
MGI SNP Detail		 Chr5:16140589 Cacna2d1 within coordinates of
Cpgi15553 within coordinates of
Gm3510 within coordinates of
Tssr45214 804 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs257495148
MGI SNP Detail		 Chr5:16140855 Cacna2d1 within coordinates of
Tssr45214 1070 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221709956
MGI SNP Detail		 Chr5:16140865 Cacna2d1 within coordinates of
Tssr45214 1080 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs46579052
MGI SNP Detail		 Chr5:16140875 Cacna2d1 within coordinates of
Tssr45214 1090 bp downstream
 SNP A/C C C C C C C C C C C A C C A C
rs47058415
MGI SNP Detail		 Chr5:16140940 Cacna2d1 within coordinates of
Tssr45214 1155 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs229049941
MGI SNP Detail		 Chr5:16140984 Cacna2d1 within coordinates of
Tssr45214 1199 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs243010323
MGI SNP Detail		 Chr5:16141111 Cacna2d1 within coordinates of
Tssr45214 1326 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260868294
MGI SNP Detail		 Chr5:16141214 Cacna2d1 within coordinates of
Tssr45214 1429 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs232699807
MGI SNP Detail		 Chr5:16141377 Cacna2d1 within coordinates of
Tssr45214 1592 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48217538
MGI SNP Detail		 Chr5:16141474 Cacna2d1 within coordinates of
Tssr45214 1689 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs50801351
MGI SNP Detail		 Chr5:16141508 Cacna2d1 within coordinates of
Tssr45214 1723 bp downstream
 SNP C/T C C C C C C T C C C T C C T C
rs230288619
MGI SNP Detail		 Chr5:16141547 Cacna2d1 within coordinates of
Tssr45214 1762 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs29731654
MGI SNP Detail		 Chr5:16141638 Cacna2d1 within coordinates of
Tssr45214 1853 bp downstream
 SNP A/G A A G
rs212241319
MGI SNP Detail		 Chr5:16141755 Cacna2d1 within coordinates of
Tssr45214 1970 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 47 of 47
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory