About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr46210
transcription start site region 46210
MGI:5973977

<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 111

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239879798
MGI SNP Detail
Chr5:53422479 Gm40303 within coordinates of
Tssr46210 1993 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T
rs264679567
MGI SNP Detail
Chr5:53422487 Gm40303 within coordinates of
Tssr46210 1985 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228868395
MGI SNP Detail
Chr5:53422488 Gm40303 within coordinates of
Tssr46210 1984 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245008425
MGI SNP Detail
Chr5:53422496 Gm40303 within coordinates of
Tssr46210 1976 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs263982454
MGI SNP Detail
Chr5:53422520 Gm40303 within coordinates of
Tssr46210 1952 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G G G G G G G A G A G G G G G G G G G G
rs583231227
MGI SNP Detail
Chr5:53422522 Gm40303 within coordinates of
Tssr46210 1950 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586876841
MGI SNP Detail
Chr5:53422578 Gm40303 within coordinates of
Tssr46210 1894 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C C C C C C C G C G C C C C C C C C C C
rs581049311
MGI SNP Detail
Chr5:53422618 Gm40303 within coordinates of
Tssr46210 1854 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229140328
MGI SNP Detail
Chr5:53422750 Gm40303 within coordinates of
Tssr46210 1722 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245124576
MGI SNP Detail
Chr5:53422766 Gm40303 within coordinates of
Tssr46210 1706 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215792392
MGI SNP Detail
Chr5:53422783 Gm40303 within coordinates of
Tssr46210 1689 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T C T T T T T T T T T T
rs225071833
MGI SNP Detail
Chr5:53422937 Gm40303 within coordinates of
Tssr46210 1535 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251290581
MGI SNP Detail
Chr5:53422988 Gm40303 within coordinates of
Tssr46210 1484 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211831288
MGI SNP Detail
Chr5:53422991 Gm40303 within coordinates of
Tssr46210 1481 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235129444
MGI SNP Detail
Chr5:53422998 Gm40303 within coordinates of
Tssr46210 1474 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32937697
MGI SNP Detail
Chr5:53423039 Gm40303 within coordinates of
Tssr46210 1433 bp upstream
SNP C/T T T T T T T C T T T C T T T
rs32937695
MGI SNP Detail
Chr5:53423092 Gm40303 within coordinates of
Tssr46210 1380 bp upstream
SNP A/G A A A A A A G A A A G A A A
rs234278716
MGI SNP Detail
Chr5:53423096 Gm40303 within coordinates of
Tssr46210 1376 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs253893003
MGI SNP Detail
Chr5:53423130 Gm40303 within coordinates of
Tssr46210 1342 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219784067
MGI SNP Detail
Chr5:53423145 Gm40303 within coordinates of
Tssr46210 1327 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G A G G G G G G A G A G G G G G G G G G G
rs239941612
MGI SNP Detail
Chr5:53423278 Gm40303 within coordinates of
Tssr46210 1194 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C T C C C C C C T C T C C C C C C C C C C
rs255618879
MGI SNP Detail
Chr5:53423296 Gm40303 within coordinates of
Tssr46210 1176 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T A T T T T T A T T T T
rs221186787
MGI SNP Detail
Chr5:53423321 Gm40303 within coordinates of
Tssr46210 1151 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247493323
MGI SNP Detail
Chr5:53423351 Gm40303 within coordinates of
Tssr46210 1121 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C T C C C C C C T C T C C C C C C C C C C
rs265921230
MGI SNP Detail
Chr5:53423363 Gm40303 within coordinates of
Tssr46210 1109 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229240318
MGI SNP Detail
Chr5:53423393 Gm40303 within coordinates of
Tssr46210 1079 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs239181614
MGI SNP Detail
Chr5:53423396 Gm40303 within coordinates of
Tssr46210 1076 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258010655
MGI SNP Detail
Chr5:53423569 Gm40303 within coordinates of
Tssr46210 903 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G A G G G G G G G G G G
rs225140499
MGI SNP Detail
Chr5:53423631 Gm40303 within coordinates of
Tssr46210 841 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C T C C C C C C C C C C
rs256017155
MGI SNP Detail
Chr5:53423633 Gm40303 within coordinates of
Tssr46210 839 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G T G G G G G G G G G G
rs211796950
MGI SNP Detail
Chr5:53423682 Gm40303 within coordinates of
Tssr46210 790 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A G A A G A
rs228870059
MGI SNP Detail
Chr5:53423696 Gm40303 within coordinates of
Tssr46210 776 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253591046
MGI SNP Detail
Chr5:53423723 Gm40303 within coordinates of
Tssr46210 749 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T C T T T T T T T T T T
rs217087015
MGI SNP Detail
Chr5:53423727 Gm40303 within coordinates of
Tssr46210 745 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G A G G G G G G A G A G G G G G G G G G G
rs234396173
MGI SNP Detail
Chr5:53423738 Gm40303 within coordinates of
Tssr46210 734 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A G A A A A A A A A A A
rs247613148
MGI SNP Detail
Chr5:53423750 Gm40303 within coordinates of
Tssr46210 722 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C T C T C C C C C C C C C C
rs213953980
MGI SNP Detail
Chr5:53423822 Gm40303 within coordinates of
Tssr46210 650 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T T T T T T
rs237221873
MGI SNP Detail
Chr5:53423881 Gm40303 within coordinates of
Tssr46210 591 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A G A A A A
rs261049920
MGI SNP Detail
Chr5:53423921 Gm40303 within coordinates of
Tssr46210 551 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T T T T T T
rs221752318
MGI SNP Detail
Chr5:53423931 Gm40303 within coordinates of
Tssr46210 541 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A A A A A A
rs242290195
MGI SNP Detail
Chr5:53423964 Gm40303 within coordinates of
Tssr46210 508 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C G C C C C C G C C C C
rs260964872
MGI SNP Detail
Chr5:53424032 Gm40303 within coordinates of
Rr125213 within coordinates of
Tssr46210 440 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220819699
MGI SNP Detail
Chr5:53424047 Gm40303 within coordinates of
Rr125213 within coordinates of
Tssr46210 425 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32943770
MGI SNP Detail
Chr5:53424056 Gm40303 within coordinates of
Rr125213 within coordinates of
Tssr46210 416 bp upstream
SNP G/T G G G G G G T G G G T G G G
rs584810256
MGI SNP Detail
Chr5:53424090 Gm40303 within coordinates of
Rr125213 within coordinates of
Tssr46210 382 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C C C C A C A C C C C C C C C C C
rs586949048
MGI SNP Detail
Chr5:53424100 Gm40303 within coordinates of
Rr125213 within coordinates of
Tssr46210 372 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G A G G G G G G G G G G
rs258024667
MGI SNP Detail
Chr5:53424162 Gm40303 within coordinates of
Rr125213 within coordinates of
Tssr46210 310 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6199882
MGI SNP Detail
Chr5:53424276 Cpgi15867 within coordinates of
Gm40303 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Tssr46210 196 bp upstream
SNP A/G A G
rs6200374
MGI SNP Detail
Chr5:53424334 Cpgi15867 within coordinates of
Gm40303 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Tssr46210 138 bp upstream
SNP A/C A C
rs6200420
MGI SNP Detail
Chr5:53424361 Cpgi15867 within coordinates of
Gm40303 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Tssr46210 111 bp upstream
SNP G/T T G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6200448
MGI SNP Detail
Chr5:53424381 Cpgi15867 within coordinates of
Gm40303 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Tssr46210 91 bp upstream
SNP C/T T C
rs258934128
MGI SNP Detail
Chr5:53424479 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs261052537
MGI SNP Detail
Chr5:53424497 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6213410
MGI SNP Detail
Chr5:53424506 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 within coordinates of
SNP C/T T C
rs6213411
MGI SNP Detail
Chr5:53424509 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 within coordinates of
SNP G/T G T
rs213975599
MGI SNP Detail
Chr5:53424526 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6213782
MGI SNP Detail
Chr5:53424534 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 3 bp downstream
SNP A/G A G
rs6213801
MGI SNP Detail
Chr5:53424543 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 12 bp downstream
SNP A/G A G
rs581432882
MGI SNP Detail
Chr5:53424554 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Rr399079 within coordinates of
Smim20 within coordinates of
Tssr46210 23 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C C C C C C G C C C C C C G C G C C C C C C C C C
rs6213857
MGI SNP Detail
Chr5:53424583 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 52 bp downstream
SNP G/T T G
rs6214753
MGI SNP Detail
Chr5:53424732 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 201 bp downstream
SNP C/T C T
rs249396160
MGI SNP Detail
Chr5:53424791 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 260 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs213568198
MGI SNP Detail
Chr5:53424817 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 286 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs239720291
MGI SNP Detail
Chr5:53424833 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 302 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs6215322
MGI SNP Detail
Chr5:53424856 Cpgi15867 within coordinates of
Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 325 bp downstream
SNP A/T A T
rs220831005
MGI SNP Detail
Chr5:53424879 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 348 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233599810
MGI SNP Detail
Chr5:53424894 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 363 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251942295
MGI SNP Detail
Chr5:53424907 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 376 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T A T T T T T A T T T T
rs219330296
MGI SNP Detail
Chr5:53425083 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 552 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G T G G G G G T G G G G
rs246826265
MGI SNP Detail
Chr5:53425097 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 566 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A C A A A A A A A A A A
rs261429271
MGI SNP Detail
Chr5:53425098 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 567 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220915386
MGI SNP Detail
Chr5:53425155 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 624 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T G T T T T T T G T G T T T T T T T T T T
rs247207282
MGI SNP Detail
Chr5:53425175 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 644 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G G A G G G G G G A G A G G G G G G G G G G
rs261063061
MGI SNP Detail
Chr5:53425189 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 658 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227062408
MGI SNP Detail
Chr5:53425226 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 695 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240952565
MGI SNP Detail
Chr5:53425235 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 704 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T C T T T T
rs32943768
MGI SNP Detail
Chr5:53425334 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 803 bp downstream
SNP C/T T T T T T T C T T T C T T T
rs257211951
MGI SNP Detail
Chr5:53425369 Rr125213 within coordinates of
Smim20 within coordinates of
Tssr46210 838 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T
rs32943766
MGI SNP Detail
Chr5:53425409 Smim20 within coordinates of
Tssr46210 878 bp downstream
SNP A/G A A A A A A G A A A G A A
rs253369728
MGI SNP Detail
Chr5:53425672 Smim20 within coordinates of
Tssr46210 1141 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A A A A A A
rs213147248
MGI SNP Detail
Chr5:53425704 Smim20 within coordinates of
Tssr46210 1173 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A G A A A A A A G A G A A A A A A A A A A
rs234361199
MGI SNP Detail
Chr5:53425726 Smim20 within coordinates of
Tssr46210 1195 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247619820
MGI SNP Detail
Chr5:53425728 Smim20 within coordinates of
Tssr46210 1197 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A G A A A A
rs215333478
MGI SNP Detail
Chr5:53425783 Smim20 within coordinates of
Tssr46210 1252 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A A A A A A
rs233653400
MGI SNP Detail
Chr5:53425792 Smim20 within coordinates of
Tssr46210 1261 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C T C C C C C C C C C C
rs249808759
MGI SNP Detail
Chr5:53425818 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1287 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T C T T T T
rs215217992
MGI SNP Detail
Chr5:53425822 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1291 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T T T T T T
rs237023690
MGI SNP Detail
Chr5:53425824 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1293 bp downstream
SNP C/T C C C C C C T T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C T C C C C
rs260865685
MGI SNP Detail
Chr5:53425842 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1311 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T C T T T T
rs221332673
MGI SNP Detail
Chr5:53425898 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1367 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A A A A A A
rs241852852
MGI SNP Detail
Chr5:53425919 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1388 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32943764
MGI SNP Detail
Chr5:53425931 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1400 bp downstream
SNP C/G G G G G G G C G G G C G G G
rs220845385
MGI SNP Detail
Chr5:53425945 Rr113655 within coordinates of
Smim20 within coordinates of
Tssr46210 1414 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T
rs241056548
MGI SNP Detail
Chr5:53426031 Smim20 within coordinates of
Tssr46210 1500 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs257273703
MGI SNP Detail
Chr5:53426036 Smim20 within coordinates of
Tssr46210 1505 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585089652
MGI SNP Detail
Chr5:53426045 Smim20 within coordinates of
Tssr46210 1514 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230770203
MGI SNP Detail
Chr5:53426051 Smim20 within coordinates of
Tssr46210 1520 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A G A A A A A G A A A A
rs241668648
MGI SNP Detail
Chr5:53426089 Smim20 within coordinates of
Tssr46210 1558 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T C T T T T T C T T T T
rs264946497
MGI SNP Detail
Chr5:53426127 Smim20 within coordinates of
Tssr46210 1596 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32942942
MGI SNP Detail
Chr5:53426160 Smim20 within coordinates of
Tssr46210 1629 bp downstream
SNP C/T T T T T T T C T T T C T T T
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 111

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory