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Mouse SNP Summary
Symbol
Name
ID
Tssr46226
transcription start site region 46226
MGI:5973993

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Showing SNP(s) 1 - 56 of 56

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264999613
MGI SNP Detail
Chr5:53744822 Rbpj within coordinates of
Tssr46226 1949 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579637585
MGI SNP Detail
Chr5:53744966 Rbpj within coordinates of
Tssr46226 1805 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230691761
MGI SNP Detail
Chr5:53745089 Rbpj within coordinates of
Tssr46226 1682 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32926825
MGI SNP Detail
Chr5:53745144 Rbpj within coordinates of
Tssr46226 1627 bp upstream
SNP A/G A G A G G A
rs256646427
MGI SNP Detail
Chr5:53745173 Rbpj within coordinates of
Tssr46226 1598 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs228491125
MGI SNP Detail
Chr5:53745185 Rbpj within coordinates of
Tssr46226 1586 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248749343
MGI SNP Detail
Chr5:53745409 Rbpj within coordinates of
Tssr46226 1362 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs215720325
MGI SNP Detail
Chr5:53745477 Rbpj within coordinates of
Tssr46226 1294 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232173218
MGI SNP Detail
Chr5:53745512 Rbpj within coordinates of
Tssr46226 1259 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253239064
MGI SNP Detail
Chr5:53745553 Rbpj within coordinates of
Tssr46226 1218 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32926093
MGI SNP Detail
Chr5:53745557 Rbpj within coordinates of
Tssr46226 1214 bp upstream
SNP A/G A G A G A G A
rs232277814
MGI SNP Detail
Chr5:53745647 Rbpj within coordinates of
Tssr46226 1124 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242510221
MGI SNP Detail
Chr5:53745658 Rbpj within coordinates of
Tssr46226 1113 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213146246
MGI SNP Detail
Chr5:53745859 Rbpj within coordinates of
Tssr46226 912 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs234663616
MGI SNP Detail
Chr5:53745884 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 887 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs253485841
MGI SNP Detail
Chr5:53745912 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 859 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224571909
MGI SNP Detail
Chr5:53745942 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 829 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241630624
MGI SNP Detail
Chr5:53745967 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 804 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6297778
MGI SNP Detail
Chr5:53746006 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 765 bp upstream
SNP A/G G A
rs222789287
MGI SNP Detail
Chr5:53746101 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46224 within coordinates of
Tssr46226 670 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs6298998
MGI SNP Detail
Chr5:53746236 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 535 bp upstream
SNP A/C C A
rs583140104
MGI SNP Detail
Chr5:53746246 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 525 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236946980
MGI SNP Detail
Chr5:53746299 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 472 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs6300114
MGI SNP Detail
Chr5:53746468 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 303 bp upstream
SNP A/C A C
rs222506534
MGI SNP Detail
Chr5:53746526 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 245 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs6300710
MGI SNP Detail
Chr5:53746586 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 185 bp upstream
SNP C/G G G C C G C
rs265484570
MGI SNP Detail
Chr5:53746632 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 139 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs232341970
MGI SNP Detail
Chr5:53746676 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 95 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255264997
MGI SNP Detail
Chr5:53746677 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 94 bp upstream
SNP G/T G G G G G G T T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G T T
rs262398423
MGI SNP Detail
Chr5:53746681 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 90 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs226181184
MGI SNP Detail
Chr5:53746716 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 55 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242450131
MGI SNP Detail
Chr5:53746722 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 49 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs213081686
MGI SNP Detail
Chr5:53746735 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 36 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C G C C C C C C G C G C C C C C C C C C C
rs234594816
MGI SNP Detail
Chr5:53746766 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 5 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216566500
MGI SNP Detail
Chr5:53746941 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 155 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239047622
MGI SNP Detail
Chr5:53746950 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 164 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs262228354
MGI SNP Detail
Chr5:53747247 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 461 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219947344
MGI SNP Detail
Chr5:53747272 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 486 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6317028
MGI SNP Detail
Chr5:53747313 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 527 bp downstream
SNP A/T T A
rs250160145
MGI SNP Detail
Chr5:53747416 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 630 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222450867
MGI SNP Detail
Chr5:53747438 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 652 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242594664
MGI SNP Detail
Chr5:53747458 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 672 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C C C C C C C C C C C C C C C
rs263109984
MGI SNP Detail
Chr5:53747506 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 720 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225085561
MGI SNP Detail
Chr5:53747583 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 797 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243082409
MGI SNP Detail
Chr5:53747712 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 926 bp downstream
Tssr46228 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs265284036
MGI SNP Detail
Chr5:53747780 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 994 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C T C C C C C C C C C
rs226115570
MGI SNP Detail
Chr5:53747823 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1037 bp downstream
Tssr46230 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242391821
MGI SNP Detail
Chr5:53748196 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1410 bp downstream
SNP A/G A A A A A A A A A G A G A G A A A A A A G A G A A G A A
rs254730552
MGI SNP Detail
Chr5:53748199 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1413 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G T G G
rs228649438
MGI SNP Detail
Chr5:53748281 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1495 bp downstream
SNP A/G G G G G G G G G G G G G G G A G G A G G G G G G A G A G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260407059
MGI SNP Detail
Chr5:53748323 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1537 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216034014
MGI SNP Detail
Chr5:53748328 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1542 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233470970
MGI SNP Detail
Chr5:53748519 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1733 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251037981
MGI SNP Detail
Chr5:53748539 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1753 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214769338
MGI SNP Detail
Chr5:53748553 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1767 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C T C C C C C T C C C C
rs229613133
MGI SNP Detail
Chr5:53748763 Cpgi15869 within coordinates of
Rbpj within coordinates of
Tssr46226 1977 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
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Showing SNP(s) 1 - 56 of 56

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory