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Mouse SNP Summary
Symbol
Name
ID 		Tssr46811
transcription start site region 46811
MGI:5974578

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Showing SNP(s) 1 - 70 of 70

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235144938
MGI SNP Detail		 Chr5:81286113 Adgrl3 within coordinates of
Tssr46811 1880 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31603195
MGI SNP Detail		 Chr5:81286213 Adgrl3 within coordinates of
Tssr46811 1780 bp upstream
 SNP C/G C C G C C G C C G C C
rs263668546
MGI SNP Detail		 Chr5:81286223 Adgrl3 within coordinates of
Tssr46811 1770 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223233326
MGI SNP Detail		 Chr5:81286266 Adgrl3 within coordinates of
Tssr46811 1727 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233788117
MGI SNP Detail		 Chr5:81286386 Adgrl3 within coordinates of
Tssr46811 1607 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253450263
MGI SNP Detail		 Chr5:81286469 Adgrl3 within coordinates of
Tssr46811 1524 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219553949
MGI SNP Detail		 Chr5:81286668 Adgrl3 within coordinates of
Tssr46811 1325 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T T T T T T T T T A T T T T
rs246892266
MGI SNP Detail		 Chr5:81286696 Adgrl3 within coordinates of
Tssr46811 1297 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261480022
MGI SNP Detail		 Chr5:81286709 Adgrl3 within coordinates of
Tssr46811 1284 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C C C C C C C C C A C C C C
rs221218266
MGI SNP Detail		 Chr5:81286766 Adgrl3 within coordinates of
Tssr46811 1227 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs48419887
MGI SNP Detail		 Chr5:81286964 Adgrl3 within coordinates of
Tssr46811 1029 bp upstream
 SNP C/T T C C
rs260061916
MGI SNP Detail		 Chr5:81286965 Adgrl3 within coordinates of
Tssr46811 1028 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226945180
MGI SNP Detail		 Chr5:81287008 Adgrl3 within coordinates of
Tssr46811 985 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31603196
MGI SNP Detail		 Chr5:81287040 Adgrl3 within coordinates of
Tssr46811 953 bp upstream
 SNP A/G A A A A A A A A G A G G
rs255750193
MGI SNP Detail		 Chr5:81287044 Adgrl3 within coordinates of
Tssr46811 949 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs45958427
MGI SNP Detail		 Chr5:81287075 Adgrl3 within coordinates of
Tssr46811 918 bp upstream
 SNP A/C A C C
rs253440789
MGI SNP Detail		 Chr5:81287094 Adgrl3 within coordinates of
Tssr46811 899 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251966778
MGI SNP Detail		 Chr5:81287155 Adgrl3 within coordinates of
Tssr46811 838 bp upstream
 SNP A/G G A
rs220831979
MGI SNP Detail		 Chr5:81287182 Adgrl3 within coordinates of
Tssr46811 811 bp upstream
 SNP A/C C A
rs586438683
MGI SNP Detail		 Chr5:81287238 Adgrl3 within coordinates of
Tssr46811 755 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213197402
MGI SNP Detail		 Chr5:81287302 Adgrl3 within coordinates of
Tssr46811 691 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251525348
MGI SNP Detail		 Chr5:81287359 Adgrl3 within coordinates of
Tssr46811 634 bp upstream
 SNP C/G G C
rs228865145
MGI SNP Detail		 Chr5:81287424 Adgrl3 within coordinates of
Tssr46811 569 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs253598413
MGI SNP Detail		 Chr5:81287425 Adgrl3 within coordinates of
Tssr46811 568 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217204433
MGI SNP Detail		 Chr5:81287582 Adgrl3 within coordinates of
Tssr46811 411 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233549303
MGI SNP Detail		 Chr5:81287610 Adgrl3 within coordinates of
Tssr46811 383 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A A A A A A A A A T A A A A
rs33742994
MGI SNP Detail		 Chr5:81287976 Adgrl3 within coordinates of
Tssr46811 17 bp upstream
 SNP A/C C A A
rs213573363
MGI SNP Detail		 Chr5:81287994 Adgrl3 within coordinates of
Tssr46811 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264097954
MGI SNP Detail		 Chr5:81288147 Adgrl3 within coordinates of
Tssr46811 150 bp downstream
 SNP C/T C T
rs260898165
MGI SNP Detail		 Chr5:81288238 Adgrl3 within coordinates of
Tssr46811 241 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G A G G G G G G G G
rs221410354
MGI SNP Detail		 Chr5:81288268 Adgrl3 within coordinates of
Tssr46811 271 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs250271455
MGI SNP Detail		 Chr5:81288292 Adgrl3 within coordinates of
Tssr46811 295 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C C T C T T T T C T T T T T T T T C T C T
rs29582866
MGI SNP Detail		 Chr5:81288372 Adgrl3 within coordinates of
Tssr46811 375 bp downstream
 SNP A/G G A A A
rs220817393
MGI SNP Detail		 Chr5:81288374 Adgrl3 within coordinates of
Tssr46811 377 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240257562
MGI SNP Detail		 Chr5:81288395 Adgrl3 within coordinates of
Tssr46811 398 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255572573
MGI SNP Detail		 Chr5:81288442 Adgrl3 within coordinates of
Tssr46811 445 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231540755
MGI SNP Detail		 Chr5:81288459 Adgrl3 within coordinates of
Tssr46811 462 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229493376
MGI SNP Detail		 Chr5:81288497 Adgrl3 within coordinates of
Tssr46811 500 bp downstream
 SNP C/T C T
rs241503590
MGI SNP Detail		 Chr5:81288556 Adgrl3 within coordinates of
Tssr46811 559 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264965064
MGI SNP Detail		 Chr5:81288575 Adgrl3 within coordinates of
Tssr46811 578 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242006890
MGI SNP Detail		 Chr5:81288616 Adgrl3 within coordinates of
Tssr46811 619 bp downstream
 SNP C/T C T
rs255933799
MGI SNP Detail		 Chr5:81288679 Adgrl3 within coordinates of
Tssr46811 682 bp downstream
 SNP C/T C T
rs233419804
MGI SNP Detail		 Chr5:81288812 Adgrl3 within coordinates of
Tssr46811 815 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580763936
MGI SNP Detail		 Chr5:81288835 Adgrl3 within coordinates of
Tssr46811 838 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs258848275
MGI SNP Detail		 Chr5:81288849 Adgrl3 within coordinates of
Tssr46811 852 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217136015
MGI SNP Detail		 Chr5:81288893 Adgrl3 within coordinates of
Tssr46811 896 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227038887
MGI SNP Detail		 Chr5:81288911 Adgrl3 within coordinates of
Tssr46811 914 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226487131
MGI SNP Detail		 Chr5:81289097 Adgrl3 within coordinates of
Tssr46811 1100 bp downstream
 SNP A/G G A
rs247079702
MGI SNP Detail		 Chr5:81289107 Adgrl3 within coordinates of
Tssr46811 1110 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213422088
MGI SNP Detail		 Chr5:81289223 Adgrl3 within coordinates of
Tssr46811 1226 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31603197
MGI SNP Detail		 Chr5:81289415 Adgrl3 within coordinates of
Tssr46811 1418 bp downstream
 SNP A/C A A A A A A A C A A A A
rs238924205
MGI SNP Detail		 Chr5:81289498 Adgrl3 within coordinates of
Tssr46811 1501 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C C C C C C C C C T C C C C
rs255353073
MGI SNP Detail		 Chr5:81289566 Adgrl3 within coordinates of
Tssr46811 1569 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T T T T T T T T T G T T T T
rs213253047
MGI SNP Detail		 Chr5:81289595 Adgrl3 within coordinates of
Tssr46811 1598 bp downstream
 SNP G/T T T G G G T T G T G G G G G G T T G G G G G G G G G G G G T G G G G T T G G G G G G G G G G G G G
rs239507814
MGI SNP Detail		 Chr5:81289596 Adgrl3 within coordinates of
Tssr46811 1599 bp downstream
 SNP A/T T A A A T T A T A A A A A A T T A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A A A
rs253161131
MGI SNP Detail		 Chr5:81289622 Adgrl3 within coordinates of
Tssr46811 1625 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs220852674
MGI SNP Detail		 Chr5:81289628 Adgrl3 within coordinates of
Tssr46811 1631 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240087718
MGI SNP Detail		 Chr5:81289765 Adgrl3 within coordinates of
Tssr46811 1768 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249891714
MGI SNP Detail		 Chr5:81289795 Adgrl3 within coordinates of
Tssr46811 1798 bp downstream
 SNP C/G G G G C C C G G C C C C C C C C G G C C C G C C C C G G C C G C C G C G G G C C C C C G G C G C C C C
rs223604648
MGI SNP Detail		 Chr5:81289864 Adgrl3 within coordinates of
Tssr46811 1867 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs244372372
MGI SNP Detail		 Chr5:81289884 Adgrl3 within coordinates of
Tssr46811 1887 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C T C C C C T C C C C C C C C T C T C
rs262063861
MGI SNP Detail		 Chr5:81289898 Adgrl3 within coordinates of
Tssr46811 1901 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T C T C C C C T C C C C C C C T T C T C
rs226506760
MGI SNP Detail		 Chr5:81289909 Adgrl3 within coordinates of
Tssr46811 1912 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243160876
MGI SNP Detail		 Chr5:81289937 Adgrl3 within coordinates of
Tssr46811 1940 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244984905
MGI SNP Detail		 Chr5:81289947 Adgrl3 within coordinates of
Tssr46811 1950 bp downstream
 SNP G/T G T
rs227070869
MGI SNP Detail		 Chr5:81289948 Adgrl3 within coordinates of
Tssr46811 1951 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246918154
MGI SNP Detail		 Chr5:81289950 Adgrl3 within coordinates of
Tssr46811 1953 bp downstream
 SNP A/G A A G G G A A G G G G G G G G A A G G G G G G G G G A G G A G G A G A A A G G G G G A A G G G G G G G
rs265017528
MGI SNP Detail		 Chr5:81289968 Adgrl3 within coordinates of
Tssr46811 1971 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A G A G G G G A G G G G G G G G A G A G
rs259937691
MGI SNP Detail		 Chr5:81289973 Adgrl3 within coordinates of
Tssr46811 1976 bp downstream
 SNP A/G G A
rs252188805
MGI SNP Detail		 Chr5:81289994 Adgrl3 within coordinates of
Cpgi16018 within coordinates of
Tssr46811 1997 bp downstream
 SNP C/G C C G G G C C G G G G G G G G C C C G G G G G G G G C G G C C C C C C C C G C G G G C C G C C G C G
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Showing SNP(s) 1 - 70 of 70
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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