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Mouse SNP Summary
Symbol
Name
ID
Tssr47120
transcription start site region 47120
MGI:5974887

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223275533
MGI SNP Detail
Chr5:90620427 Alb within coordinates of
Rr123614 within coordinates of
Tssr47118 within coordinates of
Tssr47120 1990 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31705763
MGI SNP Detail
Chr5:90620691 Alb within coordinates of
Tssr47120 1726 bp upstream
SNP G/T G G G G G G T G G G G G T G
rs579532368
MGI SNP Detail
Chr5:90620702 Alb within coordinates of
Tssr47120 1715 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31706334
MGI SNP Detail
Chr5:90620764 Alb within coordinates of
Tssr47120 1653 bp upstream
SNP C/T T T T T T T C T T T T T C T
rs233286153
MGI SNP Detail
Chr5:90620806 Alb within coordinates of
Tssr47120 1611 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs257177763
MGI SNP Detail
Chr5:90620824 Alb within coordinates of
Tssr47120 1593 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs219189496
MGI SNP Detail
Chr5:90620898 Alb within coordinates of
Tssr47120 1519 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs31706335
MGI SNP Detail
Chr5:90621816 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 601 bp upstream
SNP C/T C C C C C C T C C C C C C C C
rs241900931
MGI SNP Detail
Chr5:90621858 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 559 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs31706336
MGI SNP Detail
Chr5:90621877 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 540 bp upstream
SNP C/T C C C C C C T C C C C C T C
rs218082966
MGI SNP Detail
Chr5:90621901 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 516 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233062538
MGI SNP Detail
Chr5:90621905 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 512 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31706337
MGI SNP Detail
Chr5:90621912 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 505 bp upstream
SNP A/G A A A A A A G A A A A A A G A
rs31706338
MGI SNP Detail
Chr5:90621924 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 493 bp upstream
SNP A/G A A A A A A G A A A A A A G A
rs31706339
MGI SNP Detail
Chr5:90622104 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 313 bp upstream
SNP A/G A A A A A A A A A A A A G A
rs264412496
MGI SNP Detail
Chr5:90622244 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 173 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226158611
MGI SNP Detail
Chr5:90622283 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 134 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245506784
MGI SNP Detail
Chr5:90622346 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 71 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31706340
MGI SNP Detail
Chr5:90622417 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 within coordinates of
SNP C/T C C C C C C T C C C C C C C C
rs31706341
MGI SNP Detail
Chr5:90622466 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 within coordinates of
SNP G/T G G G G G G T G G G G G G T G
rs226401529
MGI SNP Detail
Chr5:90622467 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238110995
MGI SNP Detail
Chr5:90622491 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 within coordinates of
Tssr51773 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31706342
MGI SNP Detail
Chr5:90622552 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 11 bp downstream
Tssr51774 within coordinates of
SNP G/T G G G G G G T G G G G G G T G
rs227242856
MGI SNP Detail
Chr5:90622632 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 91 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251980999
MGI SNP Detail
Chr5:90622641 Alb within coordinates of
Rr123615 within coordinates of
Tssr47120 100 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31706343
MGI SNP Detail
Chr5:90622833 Alb within coordinates of
Tssr47120 292 bp downstream
SNP C/T T T T T T T C T T T T T T C T
rs233082401
MGI SNP Detail
Chr5:90622994 Alb within coordinates of
Tssr47120 453 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs31707054
MGI SNP Detail
Chr5:90623025 Alb within coordinates of
Tssr47120 484 bp downstream
SNP A/G G G G G G G G G G G G G G A G
rs31707055
MGI SNP Detail
Chr5:90623038 Alb within coordinates of
Tssr47120 497 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs31707056
MGI SNP Detail
Chr5:90623081 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 540 bp downstream
SNP C/T C C C C C C C C C C C C C T C
rs251342513
MGI SNP Detail
Chr5:90623110 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 569 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31707057
MGI SNP Detail
Chr5:90623157 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 616 bp downstream
Tssr47121 within coordinates of
SNP A/C C C C C C C A C C C C C C A C
rs583853366
MGI SNP Detail
Chr5:90623209 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 668 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31707058
MGI SNP Detail
Chr5:90623212 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 671 bp downstream
SNP C/T C C C C C C C C C C C C T C
rs260929311
MGI SNP Detail
Chr5:90623219 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 678 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226317396
MGI SNP Detail
Chr5:90623226 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 685 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242616848
MGI SNP Detail
Chr5:90623395 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 854 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248533994
MGI SNP Detail
Chr5:90623423 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 882 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220240581
MGI SNP Detail
Chr5:90623459 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 918 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237873667
MGI SNP Detail
Chr5:90623464 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 923 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255123352
MGI SNP Detail
Chr5:90623471 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 930 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232156836
MGI SNP Detail
Chr5:90623502 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 961 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31707059
MGI SNP Detail
Chr5:90623518 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 977 bp downstream
SNP C/T T T T T T T C T T T T T T C T
rs264259279
MGI SNP Detail
Chr5:90623523 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 982 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233679243
MGI SNP Detail
Chr5:90623524 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 983 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249825529
MGI SNP Detail
Chr5:90623679 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1138 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31707060
MGI SNP Detail
Chr5:90623710 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1169 bp downstream
SNP A/G G G G G G G G G G G G G G A
rs226411549
MGI SNP Detail
Chr5:90623720 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1179 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31707061
MGI SNP Detail
Chr5:90623822 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1281 bp downstream
SNP A/T T T T T T T A T T T T T A T
rs587482968
MGI SNP Detail
Chr5:90623836 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1295 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231946399
MGI SNP Detail
Chr5:90624002 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1461 bp downstream
SNP C/T C T
rs215822052
MGI SNP Detail
Chr5:90624039 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1498 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs31707062
MGI SNP Detail
Chr5:90624081 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1540 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs238045433
MGI SNP Detail
Chr5:90624105 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1564 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264342226
MGI SNP Detail
Chr5:90624124 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1583 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31707063
MGI SNP Detail
Chr5:90624130 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1589 bp downstream
SNP A/G A A A A A A A A A A G A A A G
rs31707794
MGI SNP Detail
Chr5:90624191 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1650 bp downstream
SNP C/T T T T T T T T T T T T T T C T
rs248493062
MGI SNP Detail
Chr5:90624213 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1672 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220391726
MGI SNP Detail
Chr5:90624220 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1679 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231779650
MGI SNP Detail
Chr5:90624252 Alb within coordinates of
Rr123616 within coordinates of
Tssr47120 1711 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252177970
MGI SNP Detail
Chr5:90624517 Rr123616 within coordinates of
Tssr47120 1976 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 61 of 61

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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