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Mouse SNP Summary
Symbol
Name
ID 		Tssr48195
transcription start site region 48195
MGI:5975962

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33342430
MGI SNP Detail		 Chr5:115104889 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1959 bp upstream
 SNP A/G G G A G G G G
rs258711371
MGI SNP Detail		 Chr5:115104911 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1937 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G G A G G G G
rs223393420
MGI SNP Detail		 Chr5:115104939 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1909 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243347403
MGI SNP Detail		 Chr5:115104987 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1861 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T G T T T T G T T T T T T G T T T T T T T T T T
rs250578433
MGI SNP Detail		 Chr5:115105040 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1808 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs578461650
MGI SNP Detail		 Chr5:115105120 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1728 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs218062742
MGI SNP Detail		 Chr5:115105171 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1677 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242621589
MGI SNP Detail		 Chr5:115105317 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1531 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260640273
MGI SNP Detail		 Chr5:115105322 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1526 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232336000
MGI SNP Detail		 Chr5:115105330 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1518 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs247460583
MGI SNP Detail		 Chr5:115105346 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1502 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32141302
MGI SNP Detail		 Chr5:115105349 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1499 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs229746860
MGI SNP Detail		 Chr5:115105355 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1493 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs242873851
MGI SNP Detail		 Chr5:115105364 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1484 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29729491
MGI SNP Detail		 Chr5:115105386 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1462 bp upstream
 SNP A/G G A A G G A
rs223753882
MGI SNP Detail		 Chr5:115105399 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1449 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33548050
MGI SNP Detail		 Chr5:115105439 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1409 bp upstream
 SNP A/C A C C A C
rs32141303
MGI SNP Detail		 Chr5:115105465 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1383 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239060660
MGI SNP Detail		 Chr5:115105466 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1382 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32142204
MGI SNP Detail		 Chr5:115105474 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1374 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs214857221
MGI SNP Detail		 Chr5:115105510 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1338 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231792240
MGI SNP Detail		 Chr5:115105513 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1335 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250637136
MGI SNP Detail		 Chr5:115105602 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1246 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218295292
MGI SNP Detail		 Chr5:115105603 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1245 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29810472
MGI SNP Detail		 Chr5:115105698 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1150 bp upstream
 SNP A/G A G G A A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32142205
MGI SNP Detail		 Chr5:115105701 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1147 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224981961
MGI SNP Detail		 Chr5:115105736 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1112 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245214714
MGI SNP Detail		 Chr5:115105792 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1056 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs265269217
MGI SNP Detail		 Chr5:115105814 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1034 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229473899
MGI SNP Detail		 Chr5:115105840 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 1008 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236333805
MGI SNP Detail		 Chr5:115105883 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 965 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253731800
MGI SNP Detail		 Chr5:115105907 Gm71622 within coordinates of
Hnf1a within coordinates of
Tssr48195 941 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs582797021
MGI SNP Detail		 Chr5:115106032 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 816 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32142206
MGI SNP Detail		 Chr5:115106110 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 738 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33312283
MGI SNP Detail		 Chr5:115106140 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 708 bp upstream
 SNP A/G G A G G A
rs586457646
MGI SNP Detail		 Chr5:115106153 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 695 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs218429916
MGI SNP Detail		 Chr5:115106166 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 682 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49654616
MGI SNP Detail		 Chr5:115106170 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 678 bp upstream
 SNP C C C C
rs252717065
MGI SNP Detail		 Chr5:115106185 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 663 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215606013
MGI SNP Detail		 Chr5:115106202 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 646 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs32142207
MGI SNP Detail		 Chr5:115106211 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 637 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244339396
MGI SNP Detail		 Chr5:115106215 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 633 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212286972
MGI SNP Detail		 Chr5:115106268 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 580 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs236569390
MGI SNP Detail		 Chr5:115106349 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 499 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263826825
MGI SNP Detail		 Chr5:115106384 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 464 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224866178
MGI SNP Detail		 Chr5:115106414 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 434 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32142208
MGI SNP Detail		 Chr5:115106437 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 411 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs257865587
MGI SNP Detail		 Chr5:115106449 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 399 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219341524
MGI SNP Detail		 Chr5:115106478 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 370 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32142209
MGI SNP Detail		 Chr5:115106521 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 327 bp upstream
 SNP A/G A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32142210
MGI SNP Detail		 Chr5:115106532 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 316 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222335225
MGI SNP Detail		 Chr5:115106628 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 220 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs240625054
MGI SNP Detail		 Chr5:115106639 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 209 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs265646516
MGI SNP Detail		 Chr5:115106666 Gm71622 within coordinates of
Hnf1a within coordinates of
Rr124128 within coordinates of
Tssr48195 182 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A A G G G A G G A G A G
rs232655510
MGI SNP Detail		 Chr5:115106970 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 103 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs257575437
MGI SNP Detail		 Chr5:115106988 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 121 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262981147
MGI SNP Detail		 Chr5:115106989 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 122 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226142139
MGI SNP Detail		 Chr5:115107022 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 155 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32142211
MGI SNP Detail		 Chr5:115107128 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 261 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212155007
MGI SNP Detail		 Chr5:115107154 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 287 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236421332
MGI SNP Detail		 Chr5:115107197 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 330 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs254112465
MGI SNP Detail		 Chr5:115107206 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 339 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217354712
MGI SNP Detail		 Chr5:115107267 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 400 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237786856
MGI SNP Detail		 Chr5:115107291 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 424 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262377461
MGI SNP Detail		 Chr5:115107296 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 429 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32142212
MGI SNP Detail		 Chr5:115107453 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 586 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs32142213
MGI SNP Detail		 Chr5:115107463 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 596 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32143094
MGI SNP Detail		 Chr5:115107476 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 609 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222391386
MGI SNP Detail		 Chr5:115107521 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 654 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249714554
MGI SNP Detail		 Chr5:115107532 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 665 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs263470616
MGI SNP Detail		 Chr5:115107593 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 726 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223895134
MGI SNP Detail		 Chr5:115107634 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 767 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32143095
MGI SNP Detail		 Chr5:115107654 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 787 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265362559
MGI SNP Detail		 Chr5:115107690 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 823 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226007928
MGI SNP Detail		 Chr5:115107701 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 834 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238456281
MGI SNP Detail		 Chr5:115107738 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 871 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256351985
MGI SNP Detail		 Chr5:115107909 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1042 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229318934
MGI SNP Detail		 Chr5:115107918 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1051 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259238873
MGI SNP Detail		 Chr5:115108031 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1164 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216994510
MGI SNP Detail		 Chr5:115108178 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1311 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs580215894
MGI SNP Detail		 Chr5:115108199 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1332 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32143096
MGI SNP Detail		 Chr5:115108375 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1508 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251647008
MGI SNP Detail		 Chr5:115108379 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1512 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32143097
MGI SNP Detail		 Chr5:115108539 Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1672 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs32143098
MGI SNP Detail		 Chr5:115108694 Cpgi16345 within coordinates of
Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1827 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248166221
MGI SNP Detail		 Chr5:115108706 Cpgi16345 within coordinates of
Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1839 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217289502
MGI SNP Detail		 Chr5:115108709 Cpgi16345 within coordinates of
Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1842 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239199643
MGI SNP Detail		 Chr5:115108712 Cpgi16345 within coordinates of
Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1845 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32143099
MGI SNP Detail		 Chr5:115108732 Cpgi16345 within coordinates of
Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1865 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs224032573
MGI SNP Detail		 Chr5:115108781 Cpgi16345 within coordinates of
Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1914 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32143100
MGI SNP Detail		 Chr5:115108847 Cpgi16345 within coordinates of
Gm71622 within coordinates of
Hnf1a within coordinates of
Hnf1aos1 within coordinates of
Hnf1aos2 within coordinates of
Rr124128 within coordinates of
Tssr48195 1980 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
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Showing SNP(s) 1 - 91 of 91
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory