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Mouse SNP Summary
Symbol
Name
ID 		Tssr48661
transcription start site region 48661
MGI:5976428

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579315038
MGI SNP Detail		 Chr5:122368469 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1960 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262107841
MGI SNP Detail		 Chr5:122368491 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1938 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs223682431
MGI SNP Detail		 Chr5:122368504 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1925 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582729482
MGI SNP Detail		 Chr5:122368526 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1903 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237053639
MGI SNP Detail		 Chr5:122368533 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1896 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs256675948
MGI SNP Detail		 Chr5:122368541 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1888 bp upstream
 SNP C/G/T C C C C C C C C C G C C C C C C C C C T C C C C C C G C G G C C C C G G C C C G C G G C C C C C C C C G G
rs228516316
MGI SNP Detail		 Chr5:122368542 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1887 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs242736750
MGI SNP Detail		 Chr5:122368551 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1878 bp upstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T T C C C C T T T C C C T T T C C C C T T T T T C T T C C
rs32207433
MGI SNP Detail		 Chr5:122368592 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1837 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs232696040
MGI SNP Detail		 Chr5:122368672 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1757 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs578517998
MGI SNP Detail		 Chr5:122368675 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1754 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs250420766
MGI SNP Detail		 Chr5:122368681 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1748 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs581853632
MGI SNP Detail		 Chr5:122368717 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1712 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214848127
MGI SNP Detail		 Chr5:122368726 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1703 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32208464
MGI SNP Detail		 Chr5:122368728 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1701 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs585500498
MGI SNP Detail		 Chr5:122368798 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1631 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242543450
MGI SNP Detail		 Chr5:122368908 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1521 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213192105
MGI SNP Detail		 Chr5:122368922 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1507 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs582385173
MGI SNP Detail		 Chr5:122369057 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1372 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs586030006
MGI SNP Detail		 Chr5:122369061 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1368 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234699968
MGI SNP Detail		 Chr5:122369079 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1350 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247796981
MGI SNP Detail		 Chr5:122369114 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1315 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216218848
MGI SNP Detail		 Chr5:122369245 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1184 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs241136002
MGI SNP Detail		 Chr5:122369338 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1091 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs32208465
MGI SNP Detail		 Chr5:122369352 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1077 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A A G A A G A A A G G G G A A A G G G A A A G G G G A A A A A G A A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223308566
MGI SNP Detail		 Chr5:122369400 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1029 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs230056547
MGI SNP Detail		 Chr5:122369445 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 984 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs580473128
MGI SNP Detail		 Chr5:122369452 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 977 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs584193501
MGI SNP Detail		 Chr5:122369459 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 970 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs587537833
MGI SNP Detail		 Chr5:122369475 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 954 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs250255347
MGI SNP Detail		 Chr5:122369591 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 838 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C
rs222547048
MGI SNP Detail		 Chr5:122369592 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 837 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs32208466
MGI SNP Detail		 Chr5:122369741 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 688 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs32208467
MGI SNP Detail		 Chr5:122369799 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 630 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G G G G A G G A G G G A A A G G G A A A G G G A A A A G G G G G G G A A
rs224981338
MGI SNP Detail		 Chr5:122369830 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 599 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245572732
MGI SNP Detail		 Chr5:122369846 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 583 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs262623921
MGI SNP Detail		 Chr5:122369879 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 550 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs583012620
MGI SNP Detail		 Chr5:122369880 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 549 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223265976
MGI SNP Detail		 Chr5:122369881 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 548 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs242864069
MGI SNP Detail		 Chr5:122369947 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 482 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs254827948
MGI SNP Detail		 Chr5:122369964 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 465 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs228742168
MGI SNP Detail		 Chr5:122369980 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 449 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs255022729
MGI SNP Detail		 Chr5:122369991 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 438 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C A C C C C C C A C C C C C C C A C C C C
rs216618649
MGI SNP Detail		 Chr5:122369992 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 437 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C T C C C C C C T C C C C C C C T C C C C
rs239077164
MGI SNP Detail		 Chr5:122369997 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 432 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs586597416
MGI SNP Detail		 Chr5:122370005 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 424 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580893987
MGI SNP Detail		 Chr5:122370043 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 386 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs32208468
MGI SNP Detail		 Chr5:122370076 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 353 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs32208469
MGI SNP Detail		 Chr5:122370093 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 336 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs229999964
MGI SNP Detail		 Chr5:122370095 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 334 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250603301
MGI SNP Detail		 Chr5:122370128 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 301 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs222906010
MGI SNP Detail		 Chr5:122370129 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 300 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236234484
MGI SNP Detail		 Chr5:122370152 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 277 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs258561796
MGI SNP Detail		 Chr5:122370178 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 251 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs225128758
MGI SNP Detail		 Chr5:122370219 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 210 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243136560
MGI SNP Detail		 Chr5:122370241 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 188 bp upstream
 SNP A/C C C C C C C C C C A C C C C C C C C C A C C A C C C A A A C C C A A A C C C A A A A C C C C C A C C A A
rs265185829
MGI SNP Detail		 Chr5:122370355 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 74 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217688440
MGI SNP Detail		 Chr5:122370359 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 70 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs236397506
MGI SNP Detail		 Chr5:122370428 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258717924
MGI SNP Detail		 Chr5:122370454 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 4 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229061180
MGI SNP Detail		 Chr5:122370511 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 61 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260433227
MGI SNP Detail		 Chr5:122370548 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 98 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263322309
MGI SNP Detail		 Chr5:122370571 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 121 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs233504981
MGI SNP Detail		 Chr5:122370592 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 142 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G G G G G G G G G A G A A G G G G A A G G G A G A A G G G G G A G G A A
rs251081343
MGI SNP Detail		 Chr5:122370607 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 157 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs214798972
MGI SNP Detail		 Chr5:122370656 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 206 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs224284482
MGI SNP Detail		 Chr5:122370673 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 223 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244378634
MGI SNP Detail		 Chr5:122370694 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 244 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216825810
MGI SNP Detail		 Chr5:122370724 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 274 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs236585472
MGI SNP Detail		 Chr5:122370744 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 294 bp downstream
 SNP A/T A A A A A A A A A T A A A A A A A A A A A A A A A A T A T T A A A A T T A A A T A T T A A A A A A A A T T
rs262815741
MGI SNP Detail		 Chr5:122370753 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 303 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216540813
MGI SNP Detail		 Chr5:122370768 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 318 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237979157
MGI SNP Detail		 Chr5:122370769 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 319 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584935531
MGI SNP Detail		 Chr5:122370853 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 403 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257829908
MGI SNP Detail		 Chr5:122370858 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 408 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs587323873
MGI SNP Detail		 Chr5:122370867 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 417 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217984271
MGI SNP Detail		 Chr5:122370872 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 422 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs236334143
MGI SNP Detail		 Chr5:122370889 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 439 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252389420
MGI SNP Detail		 Chr5:122370893 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 443 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs222435829
MGI SNP Detail		 Chr5:122370908 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 458 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs244917234
MGI SNP Detail		 Chr5:122370910 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 460 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs581402756
MGI SNP Detail		 Chr5:122370911 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 461 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585327197
MGI SNP Detail		 Chr5:122370950 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 500 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs579215299
MGI SNP Detail		 Chr5:122370951 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 501 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs265565676
MGI SNP Detail		 Chr5:122370957 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 507 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232623351
MGI SNP Detail		 Chr5:122371032 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 582 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246330339
MGI SNP Detail		 Chr5:122371072 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 622 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs258669591
MGI SNP Detail		 Chr5:122371073 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 623 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs224598163
MGI SNP Detail		 Chr5:122371093 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 643 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs244321160
MGI SNP Detail		 Chr5:122371094 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 644 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216773264
MGI SNP Detail		 Chr5:122371109 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 659 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs235104848
MGI SNP Detail		 Chr5:122371162 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 712 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs252463873
MGI SNP Detail		 Chr5:122371174 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 724 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs32208470
MGI SNP Detail		 Chr5:122371251 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 801 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs32208471
MGI SNP Detail		 Chr5:122371257 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 807 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G G G G G G G G G A G A G G G G A A G G G A G A A G G G G G G G G A A
rs32208472
MGI SNP Detail		 Chr5:122371266 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 816 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs212004568
MGI SNP Detail		 Chr5:122371354 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 904 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs230718346
MGI SNP Detail		 Chr5:122371461 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1011 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs252331581
MGI SNP Detail		 Chr5:122371462 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1012 bp downstream
 SNP C/T C C C C C C C C C T C C C C C C C C C C C C C C C T C T T C C C C T T C C C T C T T C C C C C C C C T T
rs222386293
MGI SNP Detail		 Chr5:122371551 Hvcn1 within coordinates of
Rr126731 within coordinates of
Tssr48661 1101 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
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Showing SNP(s) 1 - 100 of 125
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory