About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr49065
transcription start site region 49065
MGI:5976832

<< first < prev1 next > last >>
Showing SNP(s) 1 - 90 of 90

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29547767
MGI SNP Detail		 Chr5:130411629 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1930 bp upstream
 SNP C/T T T T C
rs252201584
MGI SNP Detail		 Chr5:130411634 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1925 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs33690622
MGI SNP Detail		 Chr5:130411730 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1829 bp upstream
 SNP G/T G G G T
rs241812562
MGI SNP Detail		 Chr5:130411748 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1811 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259470651
MGI SNP Detail		 Chr5:130411758 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1801 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218987130
MGI SNP Detail		 Chr5:130411762 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1797 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs36454916
MGI SNP Detail		 Chr5:130411782 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1777 bp upstream
 SNP C/T C T C C C
rs37499449
MGI SNP Detail		 Chr5:130411790 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1769 bp upstream
 SNP C/T T T C T C T
rs581113553
MGI SNP Detail		 Chr5:130411791 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1768 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36390599
MGI SNP Detail		 Chr5:130411824 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1735 bp upstream
 SNP C/T T T T C T C
rs36439325
MGI SNP Detail		 Chr5:130411900 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1659 bp upstream
 SNP C/T T T T C T C T
rs259296505
MGI SNP Detail		 Chr5:130411902 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1657 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229151731
MGI SNP Detail		 Chr5:130411909 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1650 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247865140
MGI SNP Detail		 Chr5:130412004 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1555 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38771984
MGI SNP Detail		 Chr5:130412023 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1536 bp upstream
 SNP C/T C C T C T
rs234623334
MGI SNP Detail		 Chr5:130412107 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1452 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255892787
MGI SNP Detail		 Chr5:130412111 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1448 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs36503894
MGI SNP Detail		 Chr5:130412128 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1431 bp upstream
 SNP G/T G G T G T
rs240720912
MGI SNP Detail		 Chr5:130412204 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1355 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251063586
MGI SNP Detail		 Chr5:130412206 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1353 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222453845
MGI SNP Detail		 Chr5:130412261 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1298 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235454468
MGI SNP Detail		 Chr5:130412294 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1265 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252801053
MGI SNP Detail		 Chr5:130412300 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1259 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221578412
MGI SNP Detail		 Chr5:130412322 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1237 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A A A G G G G G G G G G G G G G G
rs241615823
MGI SNP Detail		 Chr5:130412350 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1209 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265307866
MGI SNP Detail		 Chr5:130412386 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1173 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222693426
MGI SNP Detail		 Chr5:130412419 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1140 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs241324542
MGI SNP Detail		 Chr5:130412452 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1107 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs259329288
MGI SNP Detail		 Chr5:130412453 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1106 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229365460
MGI SNP Detail		 Chr5:130412464 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1095 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241902467
MGI SNP Detail		 Chr5:130412468 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1091 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs256625383
MGI SNP Detail		 Chr5:130412485 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1074 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs584526894
MGI SNP Detail		 Chr5:130412525 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1034 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs228150654
MGI SNP Detail		 Chr5:130412556 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 1003 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251441290
MGI SNP Detail		 Chr5:130412597 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 962 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36803529
MGI SNP Detail		 Chr5:130412603 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 956 bp upstream
 SNP G/T G G T G T G
rs36854780
MGI SNP Detail		 Chr5:130412685 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 874 bp upstream
 SNP G/T G G T G T
rs33231930
MGI SNP Detail		 Chr5:130412724 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 835 bp upstream
 SNP A/C A A A C
rs217179698
MGI SNP Detail		 Chr5:130412743 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 816 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs234055413
MGI SNP Detail		 Chr5:130412755 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 804 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252826451
MGI SNP Detail		 Chr5:130412954 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 605 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213067249
MGI SNP Detail		 Chr5:130412973 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 586 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236586819
MGI SNP Detail		 Chr5:130412977 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 582 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs258263780
MGI SNP Detail		 Chr5:130413028 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 531 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs222606569
MGI SNP Detail		 Chr5:130413031 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 528 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs241362798
MGI SNP Detail		 Chr5:130413039 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 520 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs252883188
MGI SNP Detail		 Chr5:130413142 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 417 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs223637835
MGI SNP Detail		 Chr5:130413189 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 370 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs242129143
MGI SNP Detail		 Chr5:130413261 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 298 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264829647
MGI SNP Detail		 Chr5:130413283 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 276 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs227550879
MGI SNP Detail		 Chr5:130413323 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 236 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36932413
MGI SNP Detail		 Chr5:130413381 A330070K13Rik within coordinates of
Caln1 within coordinates of
Tssr49065 178 bp upstream
 SNP C/G G G G G C
rs37039654
MGI SNP Detail		 Chr5:130413519 Caln1 within coordinates of
Tssr49065 40 bp upstream
 SNP A/C A A A A C A A
rs246715730
MGI SNP Detail		 Chr5:130413637 Caln1 within coordinates of
Tssr49065 36 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T C C C C T T C C C T T T C C T C C C C C T C C T T C T C C T C C
rs262371394
MGI SNP Detail		 Chr5:130413757 Caln1 within coordinates of
Tssr49065 156 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233030102
MGI SNP Detail		 Chr5:130413940 Caln1 within coordinates of
Tssr49065 339 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244993363
MGI SNP Detail		 Chr5:130414227 Caln1 within coordinates of
Tssr49065 626 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs217062558
MGI SNP Detail		 Chr5:130414228 Caln1 within coordinates of
Tssr49065 627 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs228118820
MGI SNP Detail		 Chr5:130414256 Caln1 within coordinates of
Tssr49065 655 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29547450
MGI SNP Detail		 Chr5:130414437 Caln1 within coordinates of
Tssr49065 836 bp downstream
 SNP A/G A A A G A G A G
rs211906021
MGI SNP Detail		 Chr5:130414442 Caln1 within coordinates of
Tssr49065 841 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38108709
MGI SNP Detail		 Chr5:130414717 Caln1 within coordinates of
Tssr49065 1116 bp downstream
 SNP C/T C T C T C T
rs262592888
MGI SNP Detail		 Chr5:130414737 Caln1 within coordinates of
Tssr49065 1136 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C C C T C C C C C C C T C C T T
rs36844569
MGI SNP Detail		 Chr5:130414774 Caln1 within coordinates of
Tssr49065 1173 bp downstream
 SNP A/G A G A G A G
rs235136842
MGI SNP Detail		 Chr5:130414805 Caln1 within coordinates of
Tssr49065 1204 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252926214
MGI SNP Detail		 Chr5:130414808 Caln1 within coordinates of
Tssr49065 1207 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs223488912
MGI SNP Detail		 Chr5:130414939 Caln1 within coordinates of
Tssr49065 1338 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235595979
MGI SNP Detail		 Chr5:130414968 Caln1 within coordinates of
Tssr49065 1367 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs37343611
MGI SNP Detail		 Chr5:130415008 Caln1 within coordinates of
Tssr49065 1407 bp downstream
 SNP A/G G G A G A
rs220299023
MGI SNP Detail		 Chr5:130415081 Caln1 within coordinates of
Tssr49065 1480 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244004135
MGI SNP Detail		 Chr5:130415095 Caln1 within coordinates of
Tssr49065 1494 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T C T C C T T T T C T T T T C T T T T C T T C C T T C T C C T C C
rs37386497
MGI SNP Detail		 Chr5:130415110 Caln1 within coordinates of
Tssr49065 1509 bp downstream
 SNP C/T C C T C T
rs47783338
MGI SNP Detail		 Chr5:130415154 Caln1 within coordinates of
Tssr49065 1553 bp downstream
 SNP A/G A A G
rs239159058
MGI SNP Detail		 Chr5:130415155 Caln1 within coordinates of
Tssr49065 1554 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259841985
MGI SNP Detail		 Chr5:130415174 Caln1 within coordinates of
Tssr49065 1573 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228037261
MGI SNP Detail		 Chr5:130415180 Caln1 within coordinates of
Tssr49065 1579 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs578428128
MGI SNP Detail		 Chr5:130415239 Caln1 within coordinates of
Tssr49065 1638 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs253561394
MGI SNP Detail		 Chr5:130415240 Caln1 within coordinates of
Tssr49065 1639 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A C A A A A
rs261350228
MGI SNP Detail		 Chr5:130415333 Caln1 within coordinates of
Tssr49065 1732 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs230875567
MGI SNP Detail		 Chr5:130415334 Caln1 within coordinates of
Tssr49065 1733 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs251790510
MGI SNP Detail		 Chr5:130415382 Caln1 within coordinates of
Tssr49065 1781 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A G G
rs38448806
MGI SNP Detail		 Chr5:130415408 Caln1 within coordinates of
Tssr49065 1807 bp downstream
 SNP A/T T T A T A
rs235176752
MGI SNP Detail		 Chr5:130415436 Caln1 within coordinates of
Tssr49065 1835 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs246903588
MGI SNP Detail		 Chr5:130415445 Caln1 within coordinates of
Tssr49065 1844 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs36285255
MGI SNP Detail		 Chr5:130415470 Caln1 within coordinates of
Tssr49065 1869 bp downstream
 SNP C/T T T C T C
rs36908493
MGI SNP Detail		 Chr5:130415501 Caln1 within coordinates of
Tssr49065 1900 bp downstream
 SNP A/G G G A G A
rs261594153
MGI SNP Detail		 Chr5:130415504 Caln1 within coordinates of
Tssr49065 1903 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220676992
MGI SNP Detail		 Chr5:130415575 Caln1 within coordinates of
Tssr49065 1974 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239138550
MGI SNP Detail		 Chr5:130415587 Caln1 within coordinates of
Tssr49065 1986 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256966799
MGI SNP Detail		 Chr5:130415588 Caln1 within coordinates of
Tssr49065 1987 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 90 of 90
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory