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Mouse SNP Summary
Symbol
Name
ID 		Tssr50469
transcription start site region 50469
MGI:5978236

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Showing SNP(s) 1 - 94 of 94

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237833066
MGI SNP Detail		 Chr5:29939415 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1995 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs580856573
MGI SNP Detail		 Chr5:29939464 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1946 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G
rs584466340
MGI SNP Detail		 Chr5:29939552 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1858 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48323169
MGI SNP Detail		 Chr5:29939572 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1838 bp downstream
 SNP G G G
rs259312072
MGI SNP Detail		 Chr5:29939584 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1826 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs579071574
MGI SNP Detail		 Chr5:29939600 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1810 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32320348
MGI SNP Detail		 Chr5:29939668 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1742 bp downstream
 SNP C/G G G G G G G C G G G G G G G C
rs224083981
MGI SNP Detail		 Chr5:29939708 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1702 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241513073
MGI SNP Detail		 Chr5:29939767 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1643 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs581388266
MGI SNP Detail		 Chr5:29939773 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1637 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585350438
MGI SNP Detail		 Chr5:29939778 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1632 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs252596827
MGI SNP Detail		 Chr5:29939812 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1598 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32320345
MGI SNP Detail		 Chr5:29939834 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1576 bp downstream
 SNP A/G A A A A A A G A A G A A G
rs236727310
MGI SNP Detail		 Chr5:29939838 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1572 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253966278
MGI SNP Detail		 Chr5:29939848 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1562 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223638336
MGI SNP Detail		 Chr5:29939861 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1549 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246214571
MGI SNP Detail		 Chr5:29939863 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1547 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263762915
MGI SNP Detail		 Chr5:29939929 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1481 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32319612
MGI SNP Detail		 Chr5:29939971 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1439 bp downstream
 SNP C/G G G G G G G G G G G C G G C G
rs32319609
MGI SNP Detail		 Chr5:29939987 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1423 bp downstream
 SNP A/C A A A A A A A A A A C A A C A
rs260909208
MGI SNP Detail		 Chr5:29940012 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1398 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32319606
MGI SNP Detail		 Chr5:29940022 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1388 bp downstream
 SNP A/G G G G G G G G G G G A G G G G
rs225344437
MGI SNP Detail		 Chr5:29940122 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1288 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32318763
MGI SNP Detail		 Chr5:29940159 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1251 bp downstream
 SNP C/G C C C C C C C C C C G C C G
rs32318760
MGI SNP Detail		 Chr5:29940165 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1245 bp downstream
 SNP A/G A A A A A A G A A A G A A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235944210
MGI SNP Detail		 Chr5:29940189 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Tssr50469 1221 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29633428
MGI SNP Detail		 Chr5:29940215 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr608877 within coordinates of
Tssr50469 1195 bp downstream
 SNP C/T C C T T T C T T C T T T C T T C C
rs215433894
MGI SNP Detail		 Chr5:29940229 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr608877 within coordinates of
Tssr50469 1181 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235025568
MGI SNP Detail		 Chr5:29940239 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr608877 within coordinates of
Tssr50469 1171 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252552709
MGI SNP Detail		 Chr5:29940240 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr608877 within coordinates of
Tssr50469 1170 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218596598
MGI SNP Detail		 Chr5:29940246 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1164 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230011268
MGI SNP Detail		 Chr5:29940249 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1161 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32318755
MGI SNP Detail		 Chr5:29940284 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1126 bp downstream
 SNP A/C A A A A A A C A A A C A A C C
rs223268321
MGI SNP Detail		 Chr5:29940288 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1122 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579156345
MGI SNP Detail		 Chr5:29940324 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1086 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs243321746
MGI SNP Detail		 Chr5:29940338 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1072 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265752493
MGI SNP Detail		 Chr5:29940387 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1023 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224387878
MGI SNP Detail		 Chr5:29940389 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 1021 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242993015
MGI SNP Detail		 Chr5:29940467 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 943 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs260858873
MGI SNP Detail		 Chr5:29940478 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 932 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32317902
MGI SNP Detail		 Chr5:29940549 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 861 bp downstream
 SNP A/C C C C C C C A C C C A C C A A
rs581949589
MGI SNP Detail		 Chr5:29940561 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 849 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32317899
MGI SNP Detail		 Chr5:29940579 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 831 bp downstream
 SNP C/T C C C C C C C C C C C T
rs32317896
MGI SNP Detail		 Chr5:29940586 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 824 bp downstream
 SNP C/G C C C C C C G C C C C C C C G
rs32317033
MGI SNP Detail		 Chr5:29940642 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 768 bp downstream
 SNP C/G C C C C C C G C C C G C C G G
rs585077519
MGI SNP Detail		 Chr5:29940700 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 710 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229765666
MGI SNP Detail		 Chr5:29940726 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr45546 within coordinates of
Tssr50469 684 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252821802
MGI SNP Detail		 Chr5:29940761 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 649 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215838865
MGI SNP Detail		 Chr5:29940802 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 608 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578358760
MGI SNP Detail		 Chr5:29940810 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 600 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234957179
MGI SNP Detail		 Chr5:29940872 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 538 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246580725
MGI SNP Detail		 Chr5:29940881 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50466 within coordinates of
Tssr50469 529 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212808133
MGI SNP Detail		 Chr5:29940913 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50467 within coordinates of
Tssr50469 497 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229960097
MGI SNP Detail		 Chr5:29940924 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Gm5129 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 486 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262451761
MGI SNP Detail		 Chr5:29940947 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 463 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs32317030
MGI SNP Detail		 Chr5:29941248 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 162 bp downstream
 SNP A/G A A A A A A G A A A G A A G A
rs238126403
MGI SNP Detail		 Chr5:29941357 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 53 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259553363
MGI SNP Detail		 Chr5:29941382 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 28 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32317027
MGI SNP Detail		 Chr5:29941401 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608877 within coordinates of
Tssr50469 9 bp downstream
 SNP A/C C C C C C C A C C C C C C C C
rs29683760
MGI SNP Detail		 Chr5:29941433 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Gm72214 within coordinates of
Rr377760 within coordinates of
Rr608879 within coordinates of
Tssr50469 7 bp upstream
 SNP C/T C C T T T C T C T T T C T T C T
rs242981368
MGI SNP Detail		 Chr5:29941592 Cpgi15670 within coordinates of
Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Gm72214 within coordinates of
Rr377760 within coordinates of
Rr608879 within coordinates of
Tssr50469 166 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254691487
MGI SNP Detail		 Chr5:29941796 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Gm72214 within coordinates of
Rr377760 within coordinates of
Tssr50469 370 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219131147
MGI SNP Detail		 Chr5:29942066 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608881 within coordinates of
Tssr50469 640 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241572671
MGI SNP Detail		 Chr5:29942069 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608881 within coordinates of
Tssr50469 643 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32316132
MGI SNP Detail		 Chr5:29942165 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608881 within coordinates of
Tssr50469 739 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs230494590
MGI SNP Detail		 Chr5:29942166 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608881 within coordinates of
Tssr50469 740 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs263037169
MGI SNP Detail		 Chr5:29942328 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 902 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs229017706
MGI SNP Detail		 Chr5:29942342 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 916 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246526200
MGI SNP Detail		 Chr5:29942351 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 925 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212745706
MGI SNP Detail		 Chr5:29942373 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 947 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs223358458
MGI SNP Detail		 Chr5:29942394 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 968 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251409764
MGI SNP Detail		 Chr5:29942397 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 971 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582165356
MGI SNP Detail		 Chr5:29942406 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 980 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs585714189
MGI SNP Detail		 Chr5:29942467 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1041 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G G T G G G G G G G T G G G G
rs580322849
MGI SNP Detail		 Chr5:29942471 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1045 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs586478431
MGI SNP Detail		 Chr5:29942510 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1084 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs580370843
MGI SNP Detail		 Chr5:29942515 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1089 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583144931
MGI SNP Detail		 Chr5:29942552 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1126 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586332145
MGI SNP Detail		 Chr5:29942603 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1177 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs214122589
MGI SNP Detail		 Chr5:29942714 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1288 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs238665288
MGI SNP Detail		 Chr5:29942776 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1350 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263397780
MGI SNP Detail		 Chr5:29942777 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1351 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32316129
MGI SNP Detail		 Chr5:29942795 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1369 bp upstream
 SNP G/T G G G G G G G G G G T G G G G
rs32316126
MGI SNP Detail		 Chr5:29942829 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1403 bp upstream
 SNP A/G A A A A A A A A A A A A A G A
rs236543929
MGI SNP Detail		 Chr5:29942840 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1414 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32321813
MGI SNP Detail		 Chr5:29942867 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1441 bp upstream
 SNP C/T T T T T T T C T T T C T T C T
rs32321810
MGI SNP Detail		 Chr5:29942903 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1477 bp upstream
 SNP C/T C C C C C C T C C C C C C T C
rs244312647
MGI SNP Detail		 Chr5:29942904 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1478 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32321807
MGI SNP Detail		 Chr5:29942960 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1534 bp upstream
 SNP G/T G G G G G G G G G G T G G G G
rs32321804
MGI SNP Detail		 Chr5:29943106 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Tssr50469 1680 bp upstream
 SNP A/G G G G G G G A G G G A G G A G
rs222617410
MGI SNP Detail		 Chr5:29943181 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608882 within coordinates of
Tssr50469 1755 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs246924010
MGI SNP Detail		 Chr5:29943216 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608882 within coordinates of
Tssr50469 1790 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256844138
MGI SNP Detail		 Chr5:29943239 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608882 within coordinates of
Tssr50469 1813 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32321011
MGI SNP Detail		 Chr5:29943299 Del(5D5Mit348-D5Mit389)6Jcs within coordinates of
Dnajb6 within coordinates of
Rr377760 within coordinates of
Rr608882 within coordinates of
Tssr50469 1873 bp upstream
 SNP A/G G G A G G A G A A A G A A G G
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Showing SNP(s) 1 - 94 of 94
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory