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Mouse SNP Summary
Symbol
Name
ID
Tssr50667
transcription start site region 50667
MGI:5978434

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Showing SNP(s) 1 - 67 of 67

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229784233
MGI SNP Detail
Chr5:34790219 Tssr50667 1831 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245407371
MGI SNP Detail
Chr5:34790242 Tssr50667 1808 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214882579
MGI SNP Detail
Chr5:34790324 Tssr50667 1726 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs46190554
MGI SNP Detail
Chr5:34790412 Tssr50667 1638 bp downstream
SNP C/T C C T
rs234504212
MGI SNP Detail
Chr5:34790422 Tssr50667 1628 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247794322
MGI SNP Detail
Chr5:34790426 Tssr50667 1624 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T
rs217285117
MGI SNP Detail
Chr5:34790485 Tssr50667 1565 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32557252
MGI SNP Detail
Chr5:34790529 Tssr50667 1521 bp downstream
SNP A/G A A A A A A G A A A G G A A G
rs261508571
MGI SNP Detail
Chr5:34790532 Tssr50667 1518 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581520810
MGI SNP Detail
Chr5:34790619 Tssr50667 1431 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222579493
MGI SNP Detail
Chr5:34790654 Tssr50667 1396 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238987018
MGI SNP Detail
Chr5:34790657 Tssr50667 1393 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs251250996
MGI SNP Detail
Chr5:34790689 Tssr50667 1361 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs221493843
MGI SNP Detail
Chr5:34790708 Tssr50667 1342 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs585213026
MGI SNP Detail
Chr5:34790730 Tssr50667 1320 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240992617
MGI SNP Detail
Chr5:34790750 Tssr50667 1300 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260099189
MGI SNP Detail
Chr5:34790776 Tssr50667 1274 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs220402269
MGI SNP Detail
Chr5:34790827 Tssr50667 1223 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33485727
MGI SNP Detail
Chr5:34790847 Tssr50667 1203 bp downstream
SNP A/C A C C
rs265148971
MGI SNP Detail
Chr5:34790956 Tssr50667 1094 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32557250
MGI SNP Detail
Chr5:34790981 Tssr50667 1069 bp downstream
SNP G/T G G G G G G G G G G T G G T G
rs246860076
MGI SNP Detail
Chr5:34790988 Mfsd10 within coordinates of
Tssr50667 1062 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs258748325
MGI SNP Detail
Chr5:34791092 Mfsd10 within coordinates of
Tssr50667 958 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32557248
MGI SNP Detail
Chr5:34791101 Mfsd10 within coordinates of
Tssr50667 949 bp downstream
SNP C/T C C C C C C C C C C T C C T
rs247782843
MGI SNP Detail
Chr5:34791154 Mfsd10 within coordinates of
Tssr50667 896 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs218900331
MGI SNP Detail
Chr5:34791263 Mfsd10 within coordinates of
Tssr50667 787 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C G C C C C
rs227966474
MGI SNP Detail
Chr5:34791300 Mfsd10 within coordinates of
Tssr50667 750 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G T G G G G G G T G G G G G G G G G G G G
rs249731831
MGI SNP Detail
Chr5:34791375 Mfsd10 within coordinates of
Tssr50667 675 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232073780
MGI SNP Detail
Chr5:34791414 Mfsd10 within coordinates of
Tssr50667 636 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs251242572
MGI SNP Detail
Chr5:34791426 Mfsd10 within coordinates of
Tssr50667 624 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs215998519
MGI SNP Detail
Chr5:34791427 Mfsd10 within coordinates of
Tssr50667 623 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs32557246
MGI SNP Detail
Chr5:34791595 Mfsd10 within coordinates of
Tssr50667 455 bp downstream
SNP C/T C C C C C C C C C C T C C T C
rs253330887
MGI SNP Detail
Chr5:34791730 Mfsd10 within coordinates of
Tssr50667 320 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220593157
MGI SNP Detail
Chr5:34791740 Mfsd10 within coordinates of
Tssr50667 310 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A G A A A A
rs245258300
MGI SNP Detail
Chr5:34791798 Mfsd10 within coordinates of
Tssr50667 252 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257303127
MGI SNP Detail
Chr5:34791863 Mfsd10 within coordinates of
Tssr50667 187 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223465181
MGI SNP Detail
Chr5:34791873 Mfsd10 within coordinates of
Tssr50667 177 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240878398
MGI SNP Detail
Chr5:34791900 Mfsd10 within coordinates of
Tssr50667 150 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260328541
MGI SNP Detail
Chr5:34791937 Mfsd10 within coordinates of
Tssr50667 113 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs227799760
MGI SNP Detail
Chr5:34791938 Mfsd10 within coordinates of
Tssr50667 112 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241733990
MGI SNP Detail
Chr5:34791959 Mfsd10 within coordinates of
Tssr50667 91 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs266054271
MGI SNP Detail
Chr5:34791980 Mfsd10 within coordinates of
Tssr50667 70 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs227379976
MGI SNP Detail
Chr5:34792064 Mfsd10 within coordinates of
Tssr50667 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs253817300
MGI SNP Detail
Chr5:34792113 Mfsd10 within coordinates of
Tssr50667 40 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213609517
MGI SNP Detail
Chr5:34792161 Mfsd10 within coordinates of
Tssr50667 88 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226009751
MGI SNP Detail
Chr5:34792314 Mfsd10 within coordinates of
Tssr50667 241 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T G T T T T
rs245225410
MGI SNP Detail
Chr5:34792353 Mfsd10 within coordinates of
Tssr50667 280 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G A G G G G
rs215934596
MGI SNP Detail
Chr5:34792399 Mfsd10 within coordinates of
Tssr50667 326 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234300436
MGI SNP Detail
Chr5:34792432 Mfsd10 within coordinates of
Tssr50667 359 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs32557244
MGI SNP Detail
Chr5:34792433 Mfsd10 within coordinates of
Tssr50667 360 bp upstream
SNP A/G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260921641
MGI SNP Detail
Chr5:34792450 Mfsd10 within coordinates of
Tssr50667 377 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C T C C C C
rs212337920
MGI SNP Detail
Chr5:34792483 Mfsd10 within coordinates of
Tssr50667 410 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32556512
MGI SNP Detail
Chr5:34792525 Mfsd10 within coordinates of
Tssr50667 452 bp upstream
SNP A/G G G G G G G G G A G G A
rs262125247
MGI SNP Detail
Chr5:34792541 Mfsd10 within coordinates of
Tssr50667 468 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223758812
MGI SNP Detail
Chr5:34792706 Mfsd10 within coordinates of
Tssr50667 633 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240812802
MGI SNP Detail
Chr5:34793043 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 970 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253931947
MGI SNP Detail
Chr5:34793203 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1130 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs223030585
MGI SNP Detail
Chr5:34793301 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1228 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243135816
MGI SNP Detail
Chr5:34793351 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1278 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264237222
MGI SNP Detail
Chr5:34793455 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1382 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227792910
MGI SNP Detail
Chr5:34793519 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1446 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241931121
MGI SNP Detail
Chr5:34793640 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1567 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265020282
MGI SNP Detail
Chr5:34793670 Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1597 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225945792
MGI SNP Detail
Chr5:34793767 Cpgi15757 within coordinates of
Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1694 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32556510
MGI SNP Detail
Chr5:34793871 Cpgi15757 within coordinates of
Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1798 bp upstream
Tssr50672 within coordinates of
SNP C/G C C C C C C G C C C G C C G C
rs257987140
MGI SNP Detail
Chr5:34793908 Cpgi15757 within coordinates of
Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1835 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228317289
MGI SNP Detail
Chr5:34794066 Cpgi15757 within coordinates of
Mfsd10 within coordinates of
Rr125078 within coordinates of
Tssr50667 1993 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 67 of 67

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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