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Mouse SNP Summary
Symbol
Name
ID 		Tssr50842
transcription start site region 50842
MGI:5978609

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232552896
MGI SNP Detail		 Chr5:41863516 Rab28 within coordinates of
Tssr50842 1945 bp downstream
 SNP C/T T T T T T T C C T C T T T T T T C C T C T T C C C C C C C C T T T C T C T T T T C C T T C C T T C C C C T
rs251574079
MGI SNP Detail		 Chr5:41863548 Rab28 within coordinates of
Tssr50842 1913 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225597632
MGI SNP Detail		 Chr5:41863670 Rab28 within coordinates of
Tssr50842 1791 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs247839415
MGI SNP Detail		 Chr5:41863697 Rab28 within coordinates of
Tssr50842 1764 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33755112
MGI SNP Detail		 Chr5:41863793 Rab28 within coordinates of
Tssr50842 1668 bp downstream
 SNP C/T C T T
rs220756768
MGI SNP Detail		 Chr5:41863999 Rab28 within coordinates of
Tssr50842 1462 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238273275
MGI SNP Detail		 Chr5:41864315 Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 1146 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs29640945
MGI SNP Detail		 Chr5:41864387 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 1074 bp downstream
 SNP C/G G G C
rs220393377
MGI SNP Detail		 Chr5:41864571 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 890 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240550068
MGI SNP Detail		 Chr5:41864573 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 888 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263563378
MGI SNP Detail		 Chr5:41864585 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 876 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T C
rs234017173
MGI SNP Detail		 Chr5:41864591 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 870 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254670843
MGI SNP Detail		 Chr5:41864673 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 788 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33486477
MGI SNP Detail		 Chr5:41864742 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 719 bp downstream
 SNP A/G A A G
rs224211206
MGI SNP Detail		 Chr5:41864758 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 703 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs243655368
MGI SNP Detail		 Chr5:41864773 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 688 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs214138674
MGI SNP Detail		 Chr5:41864870 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 591 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs582059503
MGI SNP Detail		 Chr5:41864871 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 590 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs232573064
MGI SNP Detail		 Chr5:41864881 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 580 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257813933
MGI SNP Detail		 Chr5:41864915 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 546 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs217352198
MGI SNP Detail		 Chr5:41864942 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 519 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs242578495
MGI SNP Detail		 Chr5:41864954 Cpgi15822 within coordinates of
Gm72274 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 507 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A A A A A A A
rs261164089
MGI SNP Detail		 Chr5:41865062 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 399 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C C
rs220471834
MGI SNP Detail		 Chr5:41865063 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 398 bp downstream
 SNP A/G/T G G T T T G G G G T T T T T G G T G T T A G G G A G T G G A T G G G G G A G T T G G T T G G G G
rs578723681
MGI SNP Detail		 Chr5:41865064 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 397 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230984364
MGI SNP Detail		 Chr5:41865067 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 394 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582396142
MGI SNP Detail		 Chr5:41865072 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 389 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs251378174
MGI SNP Detail		 Chr5:41865205 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 256 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220403807
MGI SNP Detail		 Chr5:41865221 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 240 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585764029
MGI SNP Detail		 Chr5:41865222 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 239 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs580469325
MGI SNP Detail		 Chr5:41865226 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 235 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs240618391
MGI SNP Detail		 Chr5:41865231 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 230 bp downstream
 SNP C/T T T T T T C C T C T T T T T C C T C T T C C C C C C C T T T C T C T T T T C C T T C C T T C C C C T
rs265741580
MGI SNP Detail		 Chr5:41865308 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Tssr50842 153 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225811298
MGI SNP Detail		 Chr5:41865442 Cpgi15822 within coordinates of
Rab28 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 19 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs52115355
MGI SNP Detail		 Chr5:41865556 Cpgi15822 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 84 bp upstream
 SNP C C
rs261483124
MGI SNP Detail		 Chr5:41865557 Cpgi15822 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 85 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs52453475
MGI SNP Detail		 Chr5:41865560 Cpgi15822 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 88 bp upstream
 SNP G G
rs243667299
MGI SNP Detail		 Chr5:41865623 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 151 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T T T T C T T T T T T T C T T T T
rs256057555
MGI SNP Detail		 Chr5:41865631 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 159 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs582975262
MGI SNP Detail		 Chr5:41865678 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 206 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226601706
MGI SNP Detail		 Chr5:41865689 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 217 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs252887839
MGI SNP Detail		 Chr5:41865717 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Rr399068 within coordinates of
Tssr50842 245 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs585486793
MGI SNP Detail		 Chr5:41865785 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 313 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217753250
MGI SNP Detail		 Chr5:41865857 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 385 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs239970700
MGI SNP Detail		 Chr5:41865869 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 397 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs260579954
MGI SNP Detail		 Chr5:41865874 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 402 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs212393354
MGI SNP Detail		 Chr5:41865889 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 417 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs231005872
MGI SNP Detail		 Chr5:41865906 Cpgi15822 within coordinates of
Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 434 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs251433063
MGI SNP Detail		 Chr5:41865910 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 438 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs220523448
MGI SNP Detail		 Chr5:41865923 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 451 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234195479
MGI SNP Detail		 Chr5:41865941 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 469 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs259627246
MGI SNP Detail		 Chr5:41865949 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 477 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226328461
MGI SNP Detail		 Chr5:41865954 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 482 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs248364455
MGI SNP Detail		 Chr5:41865974 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 502 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs260880222
MGI SNP Detail		 Chr5:41865976 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 504 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218607699
MGI SNP Detail		 Chr5:41865979 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 507 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237446454
MGI SNP Detail		 Chr5:41865997 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 525 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256200563
MGI SNP Detail		 Chr5:41866005 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 533 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs226709599
MGI SNP Detail		 Chr5:41866013 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 541 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248719130
MGI SNP Detail		 Chr5:41866032 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 560 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs263906284
MGI SNP Detail		 Chr5:41866137 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 665 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T G T T T T T T T T T T T T T T G T T T T
rs234596180
MGI SNP Detail		 Chr5:41866142 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 670 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49455212
MGI SNP Detail		 Chr5:41866155 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 683 bp upstream
 SNP A/G G G A
rs212457840
MGI SNP Detail		 Chr5:41866186 Gm72243 within coordinates of
Rr125154 within coordinates of
Tssr50842 714 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs225362929
MGI SNP Detail		 Chr5:41866223 Gm72243 within coordinates of
Tssr50842 751 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs245336021
MGI SNP Detail		 Chr5:41866229 Gm72243 within coordinates of
Tssr50842 757 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214703979
MGI SNP Detail		 Chr5:41866271 Gm72243 within coordinates of
Tssr50842 799 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs238153783
MGI SNP Detail		 Chr5:41866348 Gm72243 within coordinates of
Tssr50842 876 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263461757
MGI SNP Detail		 Chr5:41866364 Gm72243 within coordinates of
Tssr50842 892 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218229419
MGI SNP Detail		 Chr5:41866365 Gm72243 within coordinates of
Tssr50842 893 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243162402
MGI SNP Detail		 Chr5:41866409 Gm72243 within coordinates of
Tssr50842 937 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248207021
MGI SNP Detail		 Chr5:41866425 Gm72243 within coordinates of
Tssr50842 953 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs51890778
MGI SNP Detail		 Chr5:41866502 Gm72243 within coordinates of
Tssr50842 1030 bp upstream
 SNP C/T T T T T T T C C T C T T T T T T C C T C T T C C C C C C C C T T T C T C T T T T C C T T C C T T C C C C T
rs237590223
MGI SNP Detail		 Chr5:41866509 Gm72243 within coordinates of
Tssr50842 1037 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250452434
MGI SNP Detail		 Chr5:41866531 Gm72243 within coordinates of
Tssr50842 1059 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220685466
MGI SNP Detail		 Chr5:41866552 Gm72243 within coordinates of
Tssr50842 1080 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs246171006
MGI SNP Detail		 Chr5:41866609 Gm72243 within coordinates of
Tssr50842 1137 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265866721
MGI SNP Detail		 Chr5:41866625 Gm72243 within coordinates of
Tssr50842 1153 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233619591
MGI SNP Detail		 Chr5:41866632 Gm72243 within coordinates of
Tssr50842 1160 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243638584
MGI SNP Detail		 Chr5:41866678 Gm72243 within coordinates of
Tssr50842 1206 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256502756
MGI SNP Detail		 Chr5:41866679 Gm72243 within coordinates of
Tssr50842 1207 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs225424941
MGI SNP Detail		 Chr5:41866733 Gm72243 within coordinates of
Tssr50842 1261 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs245391293
MGI SNP Detail		 Chr5:41866787 Gm72243 within coordinates of
Tssr50842 1315 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214716984
MGI SNP Detail		 Chr5:41866847 Gm72243 within coordinates of
Tssr50842 1375 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232462597
MGI SNP Detail		 Chr5:41866899 Gm72243 within coordinates of
Tssr50842 1427 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253393296
MGI SNP Detail		 Chr5:41866900 Gm72243 within coordinates of
Tssr50842 1428 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218352422
MGI SNP Detail		 Chr5:41866921 Gm72243 within coordinates of
Tssr50842 1449 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs240523879
MGI SNP Detail		 Chr5:41866928 Gm72243 within coordinates of
Tssr50842 1456 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213004588
MGI SNP Detail		 Chr5:41866972 Gm72243 within coordinates of
Tssr50842 1500 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231480151
MGI SNP Detail		 Chr5:41866996 Gm72243 within coordinates of
Tssr50842 1524 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250463171
MGI SNP Detail		 Chr5:41867009 Gm72243 within coordinates of
Tssr50842 1537 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224152867
MGI SNP Detail		 Chr5:41867048 Gm72243 within coordinates of
Tssr50842 1576 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33046865
MGI SNP Detail		 Chr5:41867050 Gm72243 within coordinates of
Tssr50842 1578 bp upstream
 SNP A/G A A G
rs260107869
MGI SNP Detail		 Chr5:41867066 Gm72243 within coordinates of
Tssr50842 1594 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226981030
MGI SNP Detail		 Chr5:41867078 Gm72243 within coordinates of
Tssr50842 1606 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237012438
MGI SNP Detail		 Chr5:41867126 Gm72243 within coordinates of
Tssr50842 1654 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs256561906
MGI SNP Detail		 Chr5:41867243 Gm72243 within coordinates of
Tssr50842 1771 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs219293531
MGI SNP Detail		 Chr5:41867245 Gm72243 within coordinates of
Tssr50842 1773 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239343444
MGI SNP Detail		 Chr5:41867275 Gm72243 within coordinates of
Tssr50842 1803 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs258709800
MGI SNP Detail		 Chr5:41867290 Gm72243 within coordinates of
Tssr50842 1818 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
<< first < prev12 next > last >>
Showing SNP(s) 1 - 100 of 107
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory