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Mouse SNP Summary
Symbol
Name
ID
Tssr51430
transcription start site region 51430
MGI:5979197

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212154145
MGI SNP Detail
Alliance Variant
Chr5:76804197 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1987 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs243151801
MGI SNP Detail
Alliance Variant
Chr5:76804220 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1964 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs260322037
MGI SNP Detail
Alliance Variant
Chr5:76804271 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1913 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs216677672
MGI SNP Detail
Alliance Variant
Chr5:76804273 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1911 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs233548563
MGI SNP Detail
Alliance Variant
Chr5:76804275 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1909 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251152637
MGI SNP Detail
Alliance Variant
Chr5:76804381 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1803 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs219959827
MGI SNP Detail
Alliance Variant
Chr5:76804440 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1744 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242919171
MGI SNP Detail
Alliance Variant
Chr5:76804449 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1735 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261384399
MGI SNP Detail
Alliance Variant
Chr5:76804468 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1716 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T G T T T T T T T G T T T T
rs220061568
MGI SNP Detail
Alliance Variant
Chr5:76804543 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1641 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs582447123
MGI SNP Detail
Alliance Variant
Chr5:76804567 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1617 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs585301250
MGI SNP Detail
Alliance Variant
Chr5:76804582 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1602 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579378431
MGI SNP Detail
Alliance Variant
Chr5:76804593 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1591 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250802893
MGI SNP Detail
Alliance Variant
Chr5:76804657 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1527 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260371001
MGI SNP Detail
Alliance Variant
Chr5:76804669 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1515 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228335280
MGI SNP Detail
Alliance Variant
Chr5:76804678 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1506 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C A C C C C
rs240899437
MGI SNP Detail
Alliance Variant
Chr5:76804705 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1479 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs258647565
MGI SNP Detail
Alliance Variant
Chr5:76804720 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1464 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs226072907
MGI SNP Detail
Alliance Variant
Chr5:76804810 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1374 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs250134233
MGI SNP Detail
Alliance Variant
Chr5:76804819 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1365 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs212511140
MGI SNP Detail
Alliance Variant
Chr5:76804857 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1327 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs234015150
MGI SNP Detail
Alliance Variant
Chr5:76804868 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1316 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs259305596
MGI SNP Detail
Alliance Variant
Chr5:76804871 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1313 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215989871
MGI SNP Detail
Alliance Variant
Chr5:76804884 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1300 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs232883255
MGI SNP Detail
Alliance Variant
Chr5:76804947 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1237 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251203982
MGI SNP Detail
Alliance Variant
Chr5:76804969 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1215 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs214346395
MGI SNP Detail
Alliance Variant
Chr5:76804975 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1209 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs237920740
MGI SNP Detail
Alliance Variant
Chr5:76805085 A730089K16Rik within coordinates of
Cracd mRNA-UTR
Tssr51430 1099 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs256128549
MGI SNP Detail
Alliance Variant
Chr5:76805162 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 1022 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs219882225
MGI SNP Detail
Alliance Variant
Chr5:76805191 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 993 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240074118
MGI SNP Detail
Alliance Variant
Chr5:76805268 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 916 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs254104497
MGI SNP Detail
Alliance Variant
Chr5:76805292 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 892 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs221491779
MGI SNP Detail
Alliance Variant
Chr5:76805307 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 877 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs240171150
MGI SNP Detail
Alliance Variant
Chr5:76805310 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 874 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258709826
MGI SNP Detail
Alliance Variant
Chr5:76805412 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 772 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T T
rs222912877
MGI SNP Detail
Alliance Variant
Chr5:76805421 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 763 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33195721
MGI SNP Detail
Alliance Variant
Chr5:76805464 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 720 bp downstream
SNP A/T A A A T
rs261676829
MGI SNP Detail
Alliance Variant
Chr5:76805479 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd mRNA-UTR
Tssr51430 705 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs235220827
MGI SNP Detail
Alliance Variant
Chr5:76805545 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Tssr46729 within coordinates of
Tssr51430 639 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T C T T T T
rs246862114
MGI SNP Detail
Alliance Variant
Chr5:76805645 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Tssr51430 539 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582802416
MGI SNP Detail
Alliance Variant
Chr5:76805684 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Tssr51430 500 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs258239276
MGI SNP Detail
Alliance Variant
Chr5:76805714 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 470 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs585553722
MGI SNP Detail
Alliance Variant
Chr5:76805716 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 468 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs226915351
MGI SNP Detail
Alliance Variant
Chr5:76805761 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 423 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs244594121
MGI SNP Detail
Alliance Variant
Chr5:76805806 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 378 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs214407754
MGI SNP Detail
Alliance Variant
Chr5:76805814 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-Synonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 370 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236166271
MGI SNP Detail
Alliance Variant
Chr5:76805898 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-Synonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 286 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254085397
MGI SNP Detail
Alliance Variant
Chr5:76805949 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-Synonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 235 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T G T T T T T T T G T T T T
rs211944466
MGI SNP Detail
Alliance Variant
Chr5:76805959 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 225 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs46424295
MGI SNP Detail
Alliance Variant
Chr5:76805989 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Coding-NonSynonymous
Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 195 bp downstream
SNP C/T C T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254163472
MGI SNP Detail
Alliance Variant
Chr5:76806040 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 144 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221551669
MGI SNP Detail
Alliance Variant
Chr5:76806057 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 127 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs233517183
MGI SNP Detail
Alliance Variant
Chr5:76806107 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613608 within coordinates of
Tssr51430 77 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G G G G G G G G G G G G G G A G G
rs251638851
MGI SNP Detail
Alliance Variant
Chr5:76806192 A730089K16Rik within coordinates of
Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs222678922
MGI SNP Detail
Alliance Variant
Chr5:76806239 Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 31 bp upstream
Tssr51431 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242602191
MGI SNP Detail
Alliance Variant
Chr5:76806251 Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 43 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264739856
MGI SNP Detail
Alliance Variant
Chr5:76806284 Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 76 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G
rs227037271
MGI SNP Detail
Alliance Variant
Chr5:76806313 Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 105 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A
rs241057527
MGI SNP Detail
Alliance Variant
Chr5:76806318 Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 110 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258306290
MGI SNP Detail
Alliance Variant
Chr5:76806325 Cpgi15996 within coordinates of
Cracd Intron
Cracd mRNA-UTR
Cracd Noncoding-Transcript-Variant
Cracd Splice-Site
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 117 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs226972897
MGI SNP Detail
Alliance Variant
Chr5:76806350 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 142 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs578386381
MGI SNP Detail
Alliance Variant
Chr5:76806432 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 224 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs582206248
MGI SNP Detail
Alliance Variant
Chr5:76806611 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 403 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244647775
MGI SNP Detail
Alliance Variant
Chr5:76806647 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 439 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs262402984
MGI SNP Detail
Alliance Variant
Chr5:76806669 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 461 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229276991
MGI SNP Detail
Alliance Variant
Chr5:76806683 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 475 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs249877485
MGI SNP Detail
Alliance Variant
Chr5:76806835 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 627 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs212167150
MGI SNP Detail
Alliance Variant
Chr5:76806838 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Rr613609 within coordinates of
Tssr51430 630 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240202870
MGI SNP Detail
Alliance Variant
Chr5:76806934 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Tssr51430 726 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247865193
MGI SNP Detail
Alliance Variant
Chr5:76806939 Cracd Intron
Cracd Noncoding-Transcript-Variant
Gm10430 within coordinates of
Tssr51430 731 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215722080
MGI SNP Detail
Alliance Variant
Chr5:76806971 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 763 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233605680
MGI SNP Detail
Alliance Variant
Chr5:76806979 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 771 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs251717683
MGI SNP Detail
Alliance Variant
Chr5:76807028 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 820 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs213367701
MGI SNP Detail
Alliance Variant
Chr5:76807061 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 853 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs236784028
MGI SNP Detail
Alliance Variant
Chr5:76807084 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 876 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255873402
MGI SNP Detail
Alliance Variant
Chr5:76807093 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 885 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227579399
MGI SNP Detail
Alliance Variant
Chr5:76807106 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 898 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs241107004
MGI SNP Detail
Alliance Variant
Chr5:76807125 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 917 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs252168527
MGI SNP Detail
Alliance Variant
Chr5:76807195 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 987 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220955773
MGI SNP Detail
Alliance Variant
Chr5:76807204 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 996 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs585312196
MGI SNP Detail
Alliance Variant
Chr5:76807235 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1027 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs238568667
MGI SNP Detail
Alliance Variant
Chr5:76807251 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1043 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs265106546
MGI SNP Detail
Alliance Variant
Chr5:76807257 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1049 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs228897519
MGI SNP Detail
Alliance Variant
Chr5:76807318 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1110 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244071842
MGI SNP Detail
Alliance Variant
Chr5:76807321 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1113 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T T T T T T T T A T T T T T T T T T T T T
rs261512540
MGI SNP Detail
Alliance Variant
Chr5:76807334 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1126 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs229184415
MGI SNP Detail
Alliance Variant
Chr5:76807430 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1222 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247927721
MGI SNP Detail
Alliance Variant
Chr5:76807439 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1231 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs215781178
MGI SNP Detail
Alliance Variant
Chr5:76807443 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1235 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T C T T T T C T T T T
rs227187114
MGI SNP Detail
Alliance Variant
Chr5:76807451 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1243 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251296947
MGI SNP Detail
Alliance Variant
Chr5:76807460 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1252 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs213899127
MGI SNP Detail
Alliance Variant
Chr5:76807497 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1289 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs235180323
MGI SNP Detail
Alliance Variant
Chr5:76807511 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1303 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260609410
MGI SNP Detail
Alliance Variant
Chr5:76807520 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1312 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs219794768
MGI SNP Detail
Alliance Variant
Chr5:76807582 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1374 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234742007
MGI SNP Detail
Alliance Variant
Chr5:76807617 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1409 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs252249332
MGI SNP Detail
Alliance Variant
Chr5:76807635 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1427 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs221009322
MGI SNP Detail
Alliance Variant
Chr5:76807651 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1443 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs583649500
MGI SNP Detail
Alliance Variant
Chr5:76807692 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1484 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238631296
MGI SNP Detail
Alliance Variant
Chr5:76807773 Cracd Intron
Cracd Noncoding-Transcript-Variant
Tssr51430 1565 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 100 of 110

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory

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