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Mouse SNP Summary
Symbol
Name
ID 		Tssr51695
transcription start site region 51695
MGI:5979462

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260128485
MGI SNP Detail
Alliance Variant		 Chr5:88822051 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 2000 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs226914610
MGI SNP Detail
Alliance Variant		 Chr5:88822106 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1945 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs237627424
MGI SNP Detail
Alliance Variant		 Chr5:88822178 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1873 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs263177846
MGI SNP Detail
Alliance Variant		 Chr5:88822198 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1853 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs583320031
MGI SNP Detail
Alliance Variant		 Chr5:88822212 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1839 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs52224902
MGI SNP Detail
Alliance Variant		 Chr5:88822233 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1818 bp downstream
 SNP A/T T T A
rs239291395
MGI SNP Detail
Alliance Variant		 Chr5:88822307 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1744 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258738329
MGI SNP Detail
Alliance Variant		 Chr5:88822315 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1736 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs218479203
MGI SNP Detail
Alliance Variant		 Chr5:88822402 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1649 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238382907
MGI SNP Detail
Alliance Variant		 Chr5:88822480 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1571 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51226613
MGI SNP Detail
Alliance Variant		 Chr5:88822505 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1546 bp downstream
 SNP A/C A A C
rs50513337
MGI SNP Detail
Alliance Variant		 Chr5:88822511 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1540 bp downstream
 SNP A/G G G A
rs50991898
MGI SNP Detail
Alliance Variant		 Chr5:88822567 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1484 bp downstream
 SNP A/G A A G
rs586450755
MGI SNP Detail
Alliance Variant		 Chr5:88822587 Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Tssr51695 1464 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265736822
MGI SNP Detail
Alliance Variant		 Chr5:88822753 Cpgi16030 within coordinates of
Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Rr614150 within coordinates of
Tssr51695 1298 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581065683
MGI SNP Detail
Alliance Variant		 Chr5:88822779 Cpgi16030 within coordinates of
Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Rr614150 within coordinates of
Tssr51695 1272 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225325209
MGI SNP Detail
Alliance Variant		 Chr5:88822902 Cpgi16030 within coordinates of
Grsf1 Intron
Grsf1 Noncoding-Transcript-Variant
Rr614150 within coordinates of
Tssr51695 1149 bp downstream
 SNP A/G A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A G A A A A
rs244621048
MGI SNP Detail
Alliance Variant		 Chr5:88823099 Cpgi16030 within coordinates of
Grsf1 Intron
Grsf1 mRNA-UTR
Rr614150 within coordinates of
Tssr51695 952 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A
rs212085116
MGI SNP Detail
Alliance Variant		 Chr5:88823116 Cpgi16030 within coordinates of
Grsf1 Intron
Rr614150 within coordinates of
Tssr51695 935 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230683166
MGI SNP Detail
Alliance Variant		 Chr5:88823181 Cpgi16030 within coordinates of
Grsf1 Intron
Rr614150 within coordinates of
Tssr51695 870 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259138970
MGI SNP Detail
Alliance Variant		 Chr5:88823453 Cpgi16030 within coordinates of
Grsf1 Intron
Grsf1 mRNA-UTR
Rr614150 within coordinates of
Tssr51695 598 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs218962448
MGI SNP Detail
Alliance Variant		 Chr5:88823636 Cpgi16030 within coordinates of
Grsf1 Coding-NonSynonymous
Rr614151 within coordinates of
Tssr51695 415 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G
rs239711294
MGI SNP Detail
Alliance Variant		 Chr5:88823650 Cpgi16030 within coordinates of
Grsf1 Coding-Synonymous
Rr614151 within coordinates of
Tssr51695 401 bp downstream
 SNP C/T T T T T T T C T T T T C T T C T T C T T T T T T T T C T T T T T C T T
rs259151652
MGI SNP Detail
Alliance Variant		 Chr5:88823746 Cpgi16030 within coordinates of
Grsf1 Coding-Synonymous
Rr614151 within coordinates of
Tssr51695 305 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs219365601
MGI SNP Detail
Alliance Variant		 Chr5:88823878 Cpgi16030 within coordinates of
Grsf1 Coding-Synonymous
Rr614151 within coordinates of
Rr614153 within coordinates of
Tssr51695 173 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232455011
MGI SNP Detail
Alliance Variant		 Chr5:88823929 Cpgi16030 within coordinates of
Grsf1 Coding-Synonymous
Rr614151 within coordinates of
Tssr51695 122 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249270561
MGI SNP Detail
Alliance Variant		 Chr5:88823944 Cpgi16030 within coordinates of
Grsf1 Coding-Synonymous
Rr614151 within coordinates of
Tssr51695 107 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs230815300
MGI SNP Detail		 Chr5:88824065 Cpgi16030 within coordinates of
Rr614154 within coordinates of
Tssr51695 within coordinates of
 SNP A/T T A
rs218515420
MGI SNP Detail		 Chr5:88824099 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 31 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238418136
MGI SNP Detail		 Chr5:88824132 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 64 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs266002174
MGI SNP Detail		 Chr5:88824157 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 89 bp upstream
 SNP A/C/T C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C T C C C
rs226992947
MGI SNP Detail		 Chr5:88824195 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 127 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248016094
MGI SNP Detail		 Chr5:88824204 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 136 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263740693
MGI SNP Detail		 Chr5:88824206 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 138 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225476463
MGI SNP Detail		 Chr5:88824247 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 179 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs244652322
MGI SNP Detail		 Chr5:88824253 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 185 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253945185
MGI SNP Detail		 Chr5:88824258 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 190 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs224364654
MGI SNP Detail		 Chr5:88824286 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 218 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253858496
MGI SNP Detail		 Chr5:88824314 Cpgi16030 within coordinates of
Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 246 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218954738
MGI SNP Detail		 Chr5:88824378 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 310 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231494609
MGI SNP Detail		 Chr5:88824475 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 407 bp upstream
 SNP A/G A A A A A A A G A A A A A A A A A A G A A G A A A A G A A A A A A A A G A A A G A A A A A A A G A A A G
rs582807171
MGI SNP Detail		 Chr5:88824517 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 449 bp upstream
 SNP A/G G G G G G G G A G G G G G G G G G G A G G G G G G G A G G G G G G G G A G G G A G G G G G G G G G G G A
rs258077996
MGI SNP Detail		 Chr5:88824602 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 534 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs586768595
MGI SNP Detail		 Chr5:88824636 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 568 bp upstream
 SNP T T T T T T T T T T T T T T T T
rs581702354
MGI SNP Detail		 Chr5:88824641 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 573 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs213469188
MGI SNP Detail		 Chr5:88824677 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 609 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232493259
MGI SNP Detail		 Chr5:88824680 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 612 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249305703
MGI SNP Detail		 Chr5:88824821 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 753 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs212512309
MGI SNP Detail		 Chr5:88824840 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 772 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237545174
MGI SNP Detail		 Chr5:88824895 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 827 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260525677
MGI SNP Detail		 Chr5:88824916 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 848 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227617000
MGI SNP Detail		 Chr5:88824948 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 880 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245712799
MGI SNP Detail		 Chr5:88825043 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 975 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs252178163
MGI SNP Detail		 Chr5:88825063 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 995 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs219540710
MGI SNP Detail		 Chr5:88825115 Gm71600 within coordinates of
Rr614155 within coordinates of
Tssr51695 1047 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238526148
MGI SNP Detail		 Chr5:88825143 Gm71600 within coordinates of
Tssr51695 1075 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253977447
MGI SNP Detail		 Chr5:88825291 Gm71600 within coordinates of
Tssr51695 1223 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224424213
MGI SNP Detail		 Chr5:88825328 Gm71600 within coordinates of
Tssr51695 1260 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250104323
MGI SNP Detail		 Chr5:88825346 Gm71600 within coordinates of
Tssr51695 1278 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264436818
MGI SNP Detail		 Chr5:88825347 Gm71600 within coordinates of
Tssr51695 1279 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232074598
MGI SNP Detail		 Chr5:88825360 Gm71600 within coordinates of
Tssr51695 1292 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253066878
MGI SNP Detail		 Chr5:88825387 Gm71600 within coordinates of
Tssr51695 1319 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs213506782
MGI SNP Detail		 Chr5:88825399 Gm71600 within coordinates of
Tssr51695 1331 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs226364588
MGI SNP Detail		 Chr5:88825456 Gm71600 within coordinates of
Tssr51695 1388 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs243271617
MGI SNP Detail		 Chr5:88825468 Gm71600 within coordinates of
Tssr51695 1400 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs212545120
MGI SNP Detail		 Chr5:88825474 Gm71600 within coordinates of
Tssr51695 1406 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs239205489
MGI SNP Detail		 Chr5:88825550 Gm71600 within coordinates of
Tssr51695 1482 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264029568
MGI SNP Detail		 Chr5:88825556 Gm71600 within coordinates of
Tssr51695 1488 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219813401
MGI SNP Detail		 Chr5:88825629 Gm71600 within coordinates of
Tssr51695 1561 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs240417710
MGI SNP Detail		 Chr5:88825679 Gm71600 within coordinates of
Tssr51695 1611 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252216631
MGI SNP Detail		 Chr5:88825717 Gm71600 within coordinates of
Tssr51695 1649 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs578936740
MGI SNP Detail		 Chr5:88825739 Gm71600 within coordinates of
Tssr51695 1671 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219573964
MGI SNP Detail		 Chr5:88825824 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1756 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238566569
MGI SNP Detail		 Chr5:88825859 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1791 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248283391
MGI SNP Detail		 Chr5:88825860 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1792 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221288744
MGI SNP Detail		 Chr5:88825865 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1797 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T T T A T T T T T T T A T T T A
rs247560720
MGI SNP Detail		 Chr5:88825968 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1900 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266153478
MGI SNP Detail		 Chr5:88825970 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1902 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T C
rs231648504
MGI SNP Detail		 Chr5:88825971 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1903 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G A
rs248863590
MGI SNP Detail		 Chr5:88825980 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1912 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257432604
MGI SNP Detail		 Chr5:88825981 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1913 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226396984
MGI SNP Detail		 Chr5:88826010 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1942 bp upstream
 SNP A/C/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A C A A A
rs243406829
MGI SNP Detail		 Chr5:88826022 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1954 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs256597814
MGI SNP Detail		 Chr5:88826040 Gm71600 within coordinates of
Rr378262 within coordinates of
Tssr51695 1972 bp upstream
 SNP A/G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 84 of 84
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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