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Mouse SNP Summary
Symbol
Name
ID 		Tssr52339
transcription start site region 52339
MGI:5980106

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs4139912
MGI SNP Detail		 Chr5:106604315 Barhl2 within coordinates of
Tssr52339 1960 bp downstream
 SNP A/T T A
rs251753457
MGI SNP Detail		 Chr5:106604384 Barhl2 within coordinates of
Tssr52339 1891 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs220830297
MGI SNP Detail		 Chr5:106604425 Barhl2 within coordinates of
Tssr52339 1850 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs234587460
MGI SNP Detail		 Chr5:106604462 Barhl2 within coordinates of
Tssr52339 1813 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254022421
MGI SNP Detail		 Chr5:106604489 Barhl2 within coordinates of
Tssr52339 1786 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226825143
MGI SNP Detail		 Chr5:106604553 Barhl2 within coordinates of
Tssr52339 1722 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs248738974
MGI SNP Detail		 Chr5:106604580 Barhl2 within coordinates of
Tssr52339 1695 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264751863
MGI SNP Detail		 Chr5:106604682 Barhl2 within coordinates of
Rr123962 within coordinates of
Tssr52339 1593 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221933673
MGI SNP Detail		 Chr5:106604696 Barhl2 within coordinates of
Rr123962 within coordinates of
Tssr52339 1579 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578729015
MGI SNP Detail		 Chr5:106604834 Barhl2 within coordinates of
Rr123962 within coordinates of
Tssr52339 1441 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237873683
MGI SNP Detail		 Chr5:106604868 Barhl2 within coordinates of
Rr123962 within coordinates of
Tssr52339 1407 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256664894
MGI SNP Detail		 Chr5:106604961 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1314 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226971068
MGI SNP Detail		 Chr5:106604979 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1296 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246185593
MGI SNP Detail		 Chr5:106605012 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1263 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs264055317
MGI SNP Detail		 Chr5:106605057 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1218 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs235059525
MGI SNP Detail		 Chr5:106605116 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1159 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs249086909
MGI SNP Detail		 Chr5:106605150 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1125 bp downstream
 SNP C/T C C C C C C C C C T C T C C C C C C C C T C C C C T C C C C C C C C C T C C C T C C C C C C T C C T C C C
rs213261857
MGI SNP Detail		 Chr5:106605159 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1116 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231510265
MGI SNP Detail		 Chr5:106605186 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1089 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C
rs245600215
MGI SNP Detail		 Chr5:106605201 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1074 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215087912
MGI SNP Detail		 Chr5:106605240 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 1035 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs234549573
MGI SNP Detail		 Chr5:106605381 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 894 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C
rs263669940
MGI SNP Detail		 Chr5:106605486 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 789 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226252479
MGI SNP Detail		 Chr5:106605498 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 777 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235898226
MGI SNP Detail		 Chr5:106605630 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 645 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29525986
MGI SNP Detail		 Chr5:106605734 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 541 bp downstream
 SNP C/G C C G C
rs218991388
MGI SNP Detail		 Chr5:106605746 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 529 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs237987818
MGI SNP Detail		 Chr5:106605816 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52338 within coordinates of
Tssr52339 459 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs33151582
MGI SNP Detail		 Chr5:106605868 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 407 bp downstream
 SNP A/G G A G
rs221042103
MGI SNP Detail		 Chr5:106605892 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 383 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240170024
MGI SNP Detail		 Chr5:106605955 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 320 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs265971225
MGI SNP Detail		 Chr5:106605985 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 290 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233912638
MGI SNP Detail		 Chr5:106605997 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 278 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252763958
MGI SNP Detail		 Chr5:106606030 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 245 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs261996985
MGI SNP Detail		 Chr5:106606032 Barhl2 within coordinates of
Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 243 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs225716044
MGI SNP Detail		 Chr5:106606051 Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 224 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs582123117
MGI SNP Detail		 Chr5:106606059 Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 216 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs245751298
MGI SNP Detail		 Chr5:106606138 Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 137 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215051628
MGI SNP Detail		 Chr5:106606182 Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 93 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228005516
MGI SNP Detail		 Chr5:106606269 Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 6 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253697677
MGI SNP Detail		 Chr5:106606306 Cpgi16165 within coordinates of
Rr123962 within coordinates of
Tssr52339 22 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs218834321
MGI SNP Detail		 Chr5:106606669 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 385 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A T A A A A A A A A A A A A
rs234481294
MGI SNP Detail		 Chr5:106606709 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 425 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A A A A A A
rs261265835
MGI SNP Detail		 Chr5:106606712 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 428 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs585215004
MGI SNP Detail		 Chr5:106606752 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 468 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs3663999
MGI SNP Detail		 Chr5:106606789 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 505 bp upstream
 SNP C/T C T C T C T C
rs231748088
MGI SNP Detail		 Chr5:106606942 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 658 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs250855475
MGI SNP Detail		 Chr5:106606944 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 660 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220964934
MGI SNP Detail		 Chr5:106607009 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 725 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs249502247
MGI SNP Detail		 Chr5:106607017 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 733 bp upstream
 SNP G/T G G G G G G G G G T G T G G G G T G G G T G G T T T G G G G G G G G G T G G G T G G G G G G T G G T G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260380576
MGI SNP Detail		 Chr5:106607031 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 747 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs227353933
MGI SNP Detail		 Chr5:106607064 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 780 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241455142
MGI SNP Detail		 Chr5:106607133 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 849 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264880169
MGI SNP Detail		 Chr5:106607179 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 895 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs225889362
MGI SNP Detail		 Chr5:106607200 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 916 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239647007
MGI SNP Detail		 Chr5:106607257 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 973 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A A C A A A A A A A C A A A A
rs259089090
MGI SNP Detail		 Chr5:106607270 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 986 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs227968935
MGI SNP Detail		 Chr5:106607384 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 1100 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs259076197
MGI SNP Detail		 Chr5:106607401 Cpgi16165 within coordinates of
Gm33151 within coordinates of
Rr123962 within coordinates of
Tssr52339 1117 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219045045
MGI SNP Detail		 Chr5:106607651 Rr123962 within coordinates of
Tssr52339 1367 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs227856657
MGI SNP Detail		 Chr5:106607679 Rr123962 within coordinates of
Tssr52339 1395 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580554010
MGI SNP Detail		 Chr5:106607682 Rr123962 within coordinates of
Tssr52339 1398 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586260520
MGI SNP Detail		 Chr5:106607696 Rr123962 within coordinates of
Tssr52339 1412 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587097232
MGI SNP Detail		 Chr5:106607721 Rr123962 within coordinates of
Tssr52339 1437 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581120676
MGI SNP Detail		 Chr5:106607730 Rr123962 within coordinates of
Tssr52339 1446 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs583289566
MGI SNP Detail		 Chr5:106607736 Rr123962 within coordinates of
Tssr52339 1452 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586302480
MGI SNP Detail		 Chr5:106607741 Rr123962 within coordinates of
Tssr52339 1457 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249710714
MGI SNP Detail		 Chr5:106607814 Rr123962 within coordinates of
Tssr52339 1530 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213317980
MGI SNP Detail		 Chr5:106607837 Rr123962 within coordinates of
Tssr52339 1553 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231850023
MGI SNP Detail		 Chr5:106607892 Rr123962 within coordinates of
Tssr52339 1608 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250813410
MGI SNP Detail		 Chr5:106607921 Cpgi16166 within coordinates of
Rr123962 within coordinates of
Tssr52339 1637 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215561521
MGI SNP Detail		 Chr5:106607963 Cpgi16166 within coordinates of
Rr123962 within coordinates of
Tssr52339 1679 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C C C C C C C C T C C C C C C C T C C C C
rs248816898
MGI SNP Detail		 Chr5:106608013 Cpgi16166 within coordinates of
Rr123962 within coordinates of
Tssr52339 1729 bp upstream
 SNP C/T C T
rs263906953
MGI SNP Detail		 Chr5:106608127 Cpgi16166 within coordinates of
Rr123962 within coordinates of
Tssr52339 1843 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227089818
MGI SNP Detail		 Chr5:106608165 Cpgi16166 within coordinates of
Rr123962 within coordinates of
Tssr52339 1881 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580671254
MGI SNP Detail		 Chr5:106608203 Cpgi16166 within coordinates of
Rr123962 within coordinates of
Tssr52339 1919 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs244227445
MGI SNP Detail		 Chr5:106608272 Cpgi16166 within coordinates of
Rr123962 within coordinates of
Tssr52339 1988 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
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Showing SNP(s) 1 - 77 of 77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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