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Mouse SNP Summary
Symbol
Name
ID
Tssr52812
transcription start site region 52812
MGI:5980579

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Showing SNP(s) 1 - 100 of 169

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578514615
MGI SNP Detail
Chr5:115626014 Rr108333 within coordinates of
Tssr52812 1988 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212911847
MGI SNP Detail
Chr5:115626037 Rr108333 within coordinates of
Tssr52812 1965 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223490627
MGI SNP Detail
Chr5:115626038 Rr108333 within coordinates of
Tssr52812 1964 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs580584342
MGI SNP Detail
Chr5:115626047 Rr108333 within coordinates of
Tssr52812 1955 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs247281834
MGI SNP Detail
Chr5:115626088 Rr108333 within coordinates of
Tssr52812 1914 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs216575745
MGI SNP Detail
Chr5:115626122 Rr108333 within coordinates of
Tssr52812 1880 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs240675023
MGI SNP Detail
Chr5:115626134 Rr108333 within coordinates of
Tssr52812 1868 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs252077532
MGI SNP Detail
Chr5:115626138 Rr108333 within coordinates of
Tssr52812 1864 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs46516222
MGI SNP Detail
Chr5:115626140 Rr108333 within coordinates of
Tssr52812 1862 bp downstream
SNP A/T T T T T T T A A
rs214736581
MGI SNP Detail
Chr5:115626154 Rr108333 within coordinates of
Tssr52812 1848 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29509040
MGI SNP Detail
Chr5:115626195 Rr108333 within coordinates of
Tssr52812 1807 bp downstream
SNP C/T T C C
rs585191217
MGI SNP Detail
Chr5:115626219 Rr108333 within coordinates of
Tssr52812 1783 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262209141
MGI SNP Detail
Chr5:115626262 Rr108333 within coordinates of
Tssr52812 1740 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219155164
MGI SNP Detail
Chr5:115626272 Rr108333 within coordinates of
Tssr52812 1730 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33341210
MGI SNP Detail
Chr5:115626283 Rr108333 within coordinates of
Tssr52812 1719 bp downstream
SNP C/T C C T T C
rs255488620
MGI SNP Detail
Chr5:115626305 Rr108333 within coordinates of
Tssr52812 1697 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T T T T T T T T T T T T T
rs222983683
MGI SNP Detail
Chr5:115626347 Rr108333 within coordinates of
Tssr52812 1655 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs47389586
MGI SNP Detail
Chr5:115626376 Rr108333 within coordinates of
Tssr52812 1626 bp downstream
SNP A/G A A A G A A A A
rs45661556
MGI SNP Detail
Chr5:115626388 Rr108333 within coordinates of
Tssr52812 1614 bp downstream
SNP A/G A A A A A A A A G A
rs263286795
MGI SNP Detail
Chr5:115626489 Rr1425 within coordinates of
Tssr52812 1513 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223218277
MGI SNP Detail
Chr5:115626534 Rr1425 within coordinates of
Tssr52812 1468 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243178991
MGI SNP Detail
Chr5:115626535 Rr1425 within coordinates of
Tssr52812 1467 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254703027
MGI SNP Detail
Chr5:115626571 Rr1425 within coordinates of
Tssr52812 1431 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223460268
MGI SNP Detail
Chr5:115626592 Rr1425 within coordinates of
Tssr52812 1410 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247437115
MGI SNP Detail
Chr5:115626669 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1333 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258822518
MGI SNP Detail
Chr5:115626766 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1236 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232287368
MGI SNP Detail
Chr5:115626823 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1179 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs256956522
MGI SNP Detail
Chr5:115626824 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1178 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214555937
MGI SNP Detail
Chr5:115626873 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1129 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237774249
MGI SNP Detail
Chr5:115626874 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1128 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs33651983
MGI SNP Detail
Chr5:115626887 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1115 bp downstream
SNP C/T C C T C C T
rs579148424
MGI SNP Detail
Chr5:115626911 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1091 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs47945759
MGI SNP Detail
Chr5:115626943 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1059 bp downstream
SNP G G G
rs48868151
MGI SNP Detail
Chr5:115627024 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 978 bp downstream
SNP A/G G G G G G G A G G G G G G G
rs48472051
MGI SNP Detail
Chr5:115627047 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 955 bp downstream
SNP C/G G G G G G G G G G C G G
rs255651766
MGI SNP Detail
Chr5:115627070 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 932 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs226510364
MGI SNP Detail
Chr5:115627214 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 788 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239011907
MGI SNP Detail
Chr5:115627222 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 780 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582574479
MGI SNP Detail
Chr5:115627229 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 773 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586305098
MGI SNP Detail
Chr5:115627231 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 771 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263053814
MGI SNP Detail
Chr5:115627245 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 757 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs218974085
MGI SNP Detail
Chr5:115627267 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 735 bp downstream
SNP A/C C A
rs45799111
MGI SNP Detail
Chr5:115627330 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 672 bp downstream
SNP A/G A G G G A G A A G G G G G
rs51856678
MGI SNP Detail
Chr5:115627332 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 670 bp downstream
SNP C/T T T T T T T T C T C
rs259023369
MGI SNP Detail
Chr5:115627335 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 667 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs51342781
MGI SNP Detail
Chr5:115627399 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 603 bp downstream
SNP C/T C C C T C C C C C C C
rs252102316
MGI SNP Detail
Chr5:115627452 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 550 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49448028
MGI SNP Detail
Chr5:115627486 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 516 bp downstream
SNP C/G C C C C C G C C C C C
rs265254519
MGI SNP Detail
Chr5:115627498 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 504 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229536214
MGI SNP Detail
Chr5:115627507 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 495 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244081528
MGI SNP Detail
Chr5:115627508 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 494 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211718404
MGI SNP Detail
Chr5:115627512 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 490 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228974049
MGI SNP Detail
Chr5:115627664 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 338 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249173097
MGI SNP Detail
Chr5:115627669 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 333 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50905226
MGI SNP Detail
Chr5:115627670 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 332 bp downstream
SNP C/T T T T T T C T T T T
rs218507045
MGI SNP Detail
Chr5:115627681 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 321 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578975020
MGI SNP Detail
Chr5:115627685 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 317 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs241581480
MGI SNP Detail
Chr5:115627687 Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 315 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs582355087
MGI SNP Detail
Chr5:115627701 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 301 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G
rs258881824
MGI SNP Detail
Chr5:115627711 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 291 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs215525159
MGI SNP Detail
Chr5:115627713 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 289 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T T T T T T T T T T T T T T T T T T
rs231554455
MGI SNP Detail
Chr5:115627718 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 284 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249101839
MGI SNP Detail
Chr5:115627721 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 281 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218017971
MGI SNP Detail
Chr5:115627723 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 279 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C
rs241675675
MGI SNP Detail
Chr5:115627734 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 268 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A
rs51557296
MGI SNP Detail
Chr5:115627737 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 265 bp downstream
SNP A/G A A A A G A
rs584005651
MGI SNP Detail
Chr5:115627746 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 256 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs33231929
MGI SNP Detail
Chr5:115627750 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 252 bp downstream
SNP A/G A A A G G G A G A A G G
rs247789677
MGI SNP Detail
Chr5:115627756 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 246 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs581350710
MGI SNP Detail
Chr5:115627768 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 234 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C
rs583445630
MGI SNP Detail
Chr5:115627789 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 213 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs586461034
MGI SNP Detail
Chr5:115627803 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 199 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs50867089
MGI SNP Detail
Chr5:115627828 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 174 bp downstream
SNP A/G G G G G G G G G G A G A
rs230091440
MGI SNP Detail
Chr5:115627874 Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 128 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237822201
MGI SNP Detail
Chr5:115627888 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 114 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255862814
MGI SNP Detail
Chr5:115627915 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 87 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C T T T C
rs229030053
MGI SNP Detail
Chr5:115627943 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 59 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T T T G T T T T T T G T T T T
rs580752299
MGI SNP Detail
Chr5:115627967 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 35 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247665166
MGI SNP Detail
Chr5:115627968 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 34 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs216799811
MGI SNP Detail
Chr5:115627984 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 18 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs46089162
MGI SNP Detail
Chr5:115627996 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 6 bp downstream
SNP C/T C C C C C C C C C T C T
rs257777149
MGI SNP Detail
Chr5:115628001 Cpgi16375 within coordinates of
Gm57305 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 1 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs50869385
MGI SNP Detail
Chr5:115628132 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 120 bp upstream
SNP C/G G G G G G G G C G C C
rs231699409
MGI SNP Detail
Chr5:115628148 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 136 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249063182
MGI SNP Detail
Chr5:115628153 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 141 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T T T G T T T T T T G T T T T
rs212202812
MGI SNP Detail
Chr5:115628167 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 155 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T T T T T T G T T T T T T G T T T T
rs235354360
MGI SNP Detail
Chr5:115628191 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 179 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs260302043
MGI SNP Detail
Chr5:115628194 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 182 bp upstream
SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C T C C C C
rs225330906
MGI SNP Detail
Chr5:115628214 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 202 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs245171295
MGI SNP Detail
Chr5:115628216 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 204 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262454152
MGI SNP Detail
Chr5:115628217 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 205 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C T C C C C
rs219454376
MGI SNP Detail
Chr5:115628244 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 232 bp upstream
Tssr52815 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs49469733
MGI SNP Detail
Chr5:115628246 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 234 bp upstream
Tssr52815 within coordinates of
SNP C/T T T T T T C T T T C T C
rs255923305
MGI SNP Detail
Chr5:115628251 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 239 bp upstream
Tssr52815 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C
rs49755835
MGI SNP Detail
Chr5:115628259 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 247 bp upstream
Tssr52815 within coordinates of
SNP G/T G G G G G G G G T G G G T
rs241811631
MGI SNP Detail
Chr5:115628264 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 252 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs263397439
MGI SNP Detail
Chr5:115628268 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 256 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs29730394
MGI SNP Detail
Chr5:115628275 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr52812 263 bp upstream
SNP C/G G C G
rs252691893
MGI SNP Detail
Chr5:115628299 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr48295 within coordinates of
Tssr52812 287 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs265402428
MGI SNP Detail
Chr5:115628303 Cpgi16375 within coordinates of
Rr124163 within coordinates of
Rr1425 within coordinates of
Tssr48295 within coordinates of
Tssr52812 291 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C T C C T C C C C C C T C C C C C C T C C C C
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Showing SNP(s) 1 - 100 of 169

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory

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