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Mouse SNP Summary
Symbol
Name
ID 		Tssr53090
transcription start site region 53090
MGI:5980857

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257499794
MGI SNP Detail		 Chr5:122384192 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1955 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220290043
MGI SNP Detail		 Chr5:122384209 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1938 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243577590
MGI SNP Detail		 Chr5:122384225 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1922 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261780808
MGI SNP Detail		 Chr5:122384262 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1885 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233747431
MGI SNP Detail		 Chr5:122384345 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1802 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32212340
MGI SNP Detail		 Chr5:122384400 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1747 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs265455534
MGI SNP Detail		 Chr5:122384414 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1733 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227066772
MGI SNP Detail		 Chr5:122384445 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1702 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246257421
MGI SNP Detail		 Chr5:122384451 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1696 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213964492
MGI SNP Detail		 Chr5:122384488 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1659 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226461241
MGI SNP Detail		 Chr5:122384499 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1648 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252650692
MGI SNP Detail		 Chr5:122384521 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1626 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32212341
MGI SNP Detail		 Chr5:122384577 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1570 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242231521
MGI SNP Detail		 Chr5:122384598 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1549 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32212342
MGI SNP Detail		 Chr5:122384616 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1531 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G A A G G G A G A A G G G G G G G G A A
rs32212343
MGI SNP Detail		 Chr5:122384632 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1515 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234638592
MGI SNP Detail		 Chr5:122384638 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1509 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251127052
MGI SNP Detail		 Chr5:122384761 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1386 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220213692
MGI SNP Detail		 Chr5:122384786 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1361 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32212854
MGI SNP Detail		 Chr5:122384799 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1348 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261562120
MGI SNP Detail		 Chr5:122384855 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1292 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225432432
MGI SNP Detail		 Chr5:122384879 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1268 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs250797745
MGI SNP Detail		 Chr5:122384928 Rr126732 within coordinates of
Tctn1 within coordinates of
Tssr53090 1219 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256955081
MGI SNP Detail		 Chr5:122385021 Tctn1 within coordinates of
Tssr53090 1126 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227372088
MGI SNP Detail		 Chr5:122385025 Tctn1 within coordinates of
Tssr53090 1122 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240278567
MGI SNP Detail		 Chr5:122385097 Tctn1 within coordinates of
Tssr53090 1050 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255709405
MGI SNP Detail		 Chr5:122385109 Tctn1 within coordinates of
Tssr53090 1038 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231571578
MGI SNP Detail		 Chr5:122385113 Tctn1 within coordinates of
Tssr53090 1034 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249459999
MGI SNP Detail		 Chr5:122385187 Tctn1 within coordinates of
Tssr53090 960 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213761632
MGI SNP Detail		 Chr5:122385258 Tctn1 within coordinates of
Tssr53090 889 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233166884
MGI SNP Detail		 Chr5:122385289 Tctn1 within coordinates of
Tssr53090 858 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs260326153
MGI SNP Detail		 Chr5:122385330 Tctn1 within coordinates of
Tssr53090 817 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs578729107
MGI SNP Detail		 Chr5:122385336 Tctn1 within coordinates of
Tssr53090 811 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215319747
MGI SNP Detail		 Chr5:122385436 Tctn1 within coordinates of
Tssr53090 711 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234984773
MGI SNP Detail		 Chr5:122385464 Tctn1 within coordinates of
Tssr53090 683 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs251066923
MGI SNP Detail		 Chr5:122385508 Tctn1 within coordinates of
Tssr53090 639 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214267127
MGI SNP Detail		 Chr5:122385575 Tctn1 within coordinates of
Tssr53090 572 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32212855
MGI SNP Detail		 Chr5:122385666 Tctn1 within coordinates of
Tssr53090 481 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs256229755
MGI SNP Detail		 Chr5:122385699 Tctn1 within coordinates of
Tssr53090 448 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32212856
MGI SNP Detail		 Chr5:122385702 Tctn1 within coordinates of
Tssr53090 445 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs248014869
MGI SNP Detail		 Chr5:122385703 Tctn1 within coordinates of
Tssr53090 444 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250951638
MGI SNP Detail		 Chr5:122385737 Tctn1 within coordinates of
Tssr53090 410 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221226205
MGI SNP Detail		 Chr5:122385749 Tctn1 within coordinates of
Tssr53090 398 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237291668
MGI SNP Detail		 Chr5:122385751 Tctn1 within coordinates of
Tssr53090 396 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32212857
MGI SNP Detail		 Chr5:122385763 Tctn1 within coordinates of
Tssr53090 384 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs223761261
MGI SNP Detail		 Chr5:122385792 Tctn1 within coordinates of
Tssr53090 355 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs32212858
MGI SNP Detail		 Chr5:122385799 Tctn1 within coordinates of
Tssr53090 348 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs262144354
MGI SNP Detail		 Chr5:122385844 Rr116077 within coordinates of
Tctn1 within coordinates of
Tssr53090 303 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs234501378
MGI SNP Detail		 Chr5:122385884 Rr116077 within coordinates of
Tctn1 within coordinates of
Tssr53090 263 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248854705
MGI SNP Detail		 Chr5:122385920 Rr116077 within coordinates of
Tctn1 within coordinates of
Tssr53090 227 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259169823
MGI SNP Detail		 Chr5:122386155 Tctn1 within coordinates of
Tssr53090 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs584316878
MGI SNP Detail		 Chr5:122386170 Tctn1 within coordinates of
Tssr53090 14 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32212859
MGI SNP Detail		 Chr5:122386201 Tctn1 within coordinates of
Tssr53090 45 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs245158431
MGI SNP Detail		 Chr5:122386202 Tctn1 within coordinates of
Tssr53090 46 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32212860
MGI SNP Detail		 Chr5:122386235 Tctn1 within coordinates of
Tssr53090 79 bp upstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T T T C T T T T T C C C T T T C C C C T T T T T C T T C C
rs234532753
MGI SNP Detail		 Chr5:122386270 Tctn1 within coordinates of
Tssr53090 114 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32212861
MGI SNP Detail		 Chr5:122386295 Tctn1 within coordinates of
Tssr53090 139 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579131925
MGI SNP Detail		 Chr5:122386338 Tctn1 within coordinates of
Tssr53090 182 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217934513
MGI SNP Detail		 Chr5:122386387 Tctn1 within coordinates of
Tssr53090 231 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243020845
MGI SNP Detail		 Chr5:122386388 Tctn1 within coordinates of
Tssr53090 232 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs250897112
MGI SNP Detail		 Chr5:122386393 Tctn1 within coordinates of
Tssr53090 237 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs221164905
MGI SNP Detail		 Chr5:122386413 Tctn1 within coordinates of
Tssr53090 257 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231173313
MGI SNP Detail		 Chr5:122386422 Tctn1 within coordinates of
Tssr53090 266 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250248485
MGI SNP Detail		 Chr5:122386433 Tctn1 within coordinates of
Tssr53090 277 bp upstream
 SNP C/T T T T T T T T T T C T T T T T T T T T C T T T T T T T T T T T T T T C C T T T C T C C T T T T T T T T C C
rs219864336
MGI SNP Detail		 Chr5:122386470 Tctn1 within coordinates of
Tssr53090 314 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs241503639
MGI SNP Detail		 Chr5:122386549 Tctn1 within coordinates of
Tssr53090 393 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264939385
MGI SNP Detail		 Chr5:122386580 Tctn1 within coordinates of
Tssr53090 424 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs226135036
MGI SNP Detail		 Chr5:122386581 Tctn1 within coordinates of
Tssr53090 425 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32212863
MGI SNP Detail		 Chr5:122386718 Tctn1 within coordinates of
Tssr53090 562 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs259534518
MGI SNP Detail		 Chr5:122386754 Tctn1 within coordinates of
Tssr53090 598 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228122010
MGI SNP Detail		 Chr5:122386807 Tctn1 within coordinates of
Tssr53090 651 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs245094240
MGI SNP Detail		 Chr5:122386879 Tctn1 within coordinates of
Tssr53090 723 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262844473
MGI SNP Detail		 Chr5:122386885 Tctn1 within coordinates of
Tssr53090 729 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228493463
MGI SNP Detail		 Chr5:122386903 Tctn1 within coordinates of
Tssr53090 747 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249719765
MGI SNP Detail		 Chr5:122386924 Tctn1 within coordinates of
Tssr53090 768 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217976177
MGI SNP Detail		 Chr5:122386975 Tctn1 within coordinates of
Tssr53090 819 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235108177
MGI SNP Detail		 Chr5:122387055 Tctn1 within coordinates of
Tssr53090 899 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245240792
MGI SNP Detail		 Chr5:122387431 Tctn1 within coordinates of
Tssr53090 1275 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215930637
MGI SNP Detail		 Chr5:122387547 Tctn1 within coordinates of
Tssr53090 1391 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231119734
MGI SNP Detail		 Chr5:122387562 Tctn1 within coordinates of
Tssr53090 1406 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250189205
MGI SNP Detail		 Chr5:122387565 Tctn1 within coordinates of
Tssr53090 1409 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220073406
MGI SNP Detail		 Chr5:122387585 Tctn1 within coordinates of
Tssr53090 1429 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236983729
MGI SNP Detail		 Chr5:122387765 Tctn1 within coordinates of
Tssr53090 1609 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260076179
MGI SNP Detail		 Chr5:122387809 Tctn1 within coordinates of
Tssr53090 1653 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226512652
MGI SNP Detail		 Chr5:122387810 Tctn1 within coordinates of
Tssr53090 1654 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243048511
MGI SNP Detail		 Chr5:122387931 Tctn1 within coordinates of
Tssr53090 1775 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582309470
MGI SNP Detail		 Chr5:122387950 Tctn1 within coordinates of
Tssr53090 1794 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253207628
MGI SNP Detail		 Chr5:122387969 Tctn1 within coordinates of
Tssr53090 1813 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs586425571
MGI SNP Detail		 Chr5:122388010 Tctn1 within coordinates of
Tssr53090 1854 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579197420
MGI SNP Detail		 Chr5:122388012 Tctn1 within coordinates of
Tssr53090 1856 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C T C C C C C C C T C C C C
rs222237465
MGI SNP Detail		 Chr5:122388090 Tctn1 within coordinates of
Tssr53090 1934 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 91 of 91
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory