About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID 		Tssr53780
transcription start site region 53780
MGI:5981547

<< first < prev1 next > last >>
Showing SNP(s) 1 - 87 of 87

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32253467
MGI SNP Detail		 Chr5:135961423 Gm40346 within coordinates of
Rr622478 within coordinates of
Tssr53780 1988 bp downstream
Ywhag within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250719907
MGI SNP Detail		 Chr5:135961541 Gm40346 within coordinates of
Rr622478 within coordinates of
Tssr53780 1870 bp downstream
Ywhag within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219838823
MGI SNP Detail		 Chr5:135961587 Gm40346 within coordinates of
Tssr53780 1824 bp downstream
Ywhag within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32253468
MGI SNP Detail		 Chr5:135961595 Gm40346 within coordinates of
Tssr53780 1816 bp downstream
Ywhag within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T G T T T T T T T T T T T T T T T T T T T T T G
rs263372197
MGI SNP Detail		 Chr5:135961598 Gm40346 within coordinates of
Tssr53780 1813 bp downstream
Ywhag within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs225680663
MGI SNP Detail		 Chr5:135961605 Gm40346 within coordinates of
Tssr53780 1806 bp downstream
Ywhag within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246949795
MGI SNP Detail		 Chr5:135961606 Gm40346 within coordinates of
Tssr53780 1805 bp downstream
Ywhag within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs266051409
MGI SNP Detail		 Chr5:135961650 Gm40346 within coordinates of
Tssr53780 1761 bp downstream
Ywhag within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs227407887
MGI SNP Detail		 Chr5:135961651 Gm40346 within coordinates of
Tssr53780 1760 bp downstream
Ywhag within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G A G G G G
rs241073560
MGI SNP Detail		 Chr5:135961770 Gm40346 within coordinates of
Tssr53780 1641 bp downstream
Ywhag within coordinates of
 SNP C C C
rs225984757
MGI SNP Detail		 Chr5:135961837 Gm40346 within coordinates of
Tssr53780 1574 bp downstream
Ywhag within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32253469
MGI SNP Detail		 Chr5:135961856 Gm40346 within coordinates of
Tssr53780 1555 bp downstream
Ywhag within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs216608359
MGI SNP Detail		 Chr5:135961896 Gm40346 within coordinates of
Tssr53780 1515 bp downstream
Ywhag within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs580688859
MGI SNP Detail		 Chr5:135961938 Gm40346 within coordinates of
Tssr53780 1473 bp downstream
Ywhag within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234054855
MGI SNP Detail		 Chr5:135961969 Gm40346 within coordinates of
Tssr53780 1442 bp downstream
Ywhag within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253943738
MGI SNP Detail		 Chr5:135962032 Gm40346 within coordinates of
Tssr53780 1379 bp downstream
Ywhag within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584195848
MGI SNP Detail		 Chr5:135962057 Gm40346 within coordinates of
Tssr53780 1354 bp downstream
Ywhag within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219247260
MGI SNP Detail		 Chr5:135962360 Gm40346 within coordinates of
Rr622480 within coordinates of
Tssr53780 1051 bp downstream
Ywhag within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230032199
MGI SNP Detail		 Chr5:135962361 Gm40346 within coordinates of
Rr622480 within coordinates of
Tssr53780 1050 bp downstream
Ywhag within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250648296
MGI SNP Detail		 Chr5:135962382 Gm40346 within coordinates of
Rr622480 within coordinates of
Tssr53780 1029 bp downstream
Ywhag within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs213895755
MGI SNP Detail		 Chr5:135962405 Gm40346 within coordinates of
Rr622480 within coordinates of
Tssr53780 1006 bp downstream
Ywhag within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32253470
MGI SNP Detail		 Chr5:135962414 Gm40346 within coordinates of
Rr622480 within coordinates of
Tssr53780 997 bp downstream
Ywhag within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs32253471
MGI SNP Detail		 Chr5:135962447 Gm40346 within coordinates of
Rr622480 within coordinates of
Tssr53780 964 bp downstream
Ywhag within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs225295026
MGI SNP Detail		 Chr5:135962572 Gm40346 within coordinates of
Rr622480 within coordinates of
Tssr53780 839 bp downstream
Ywhag within coordinates of
 SNP A/C C C C C C C C C C A A C A C A C C A
rs52406363
MGI SNP Detail		 Chr5:135962641 Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 770 bp downstream
Ywhag within coordinates of
 SNP A/C C A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584582725
MGI SNP Detail		 Chr5:135962696 Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 715 bp downstream
Ywhag within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579052123
MGI SNP Detail		 Chr5:135962724 Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 687 bp downstream
Ywhag within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32253472
MGI SNP Detail		 Chr5:135962791 Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 620 bp downstream
Ywhag within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs255120620
MGI SNP Detail		 Chr5:135962944 Cpgi16773 within coordinates of
Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 467 bp downstream
Ywhag within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225891229
MGI SNP Detail		 Chr5:135963028 Cpgi16773 within coordinates of
Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 383 bp downstream
Ywhag within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs244997322
MGI SNP Detail		 Chr5:135963038 Cpgi16773 within coordinates of
Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 373 bp downstream
Ywhag within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T C C C C C C T C C C C C C C T C C C C
rs265683262
MGI SNP Detail		 Chr5:135963048 Cpgi16773 within coordinates of
Gm40346 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 363 bp downstream
Ywhag within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233094069
MGI SNP Detail		 Chr5:135963368 Cpgi16773 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 43 bp downstream
Ywhag within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A T A A A A A A T A A A A A A A A A A A
rs260216902
MGI SNP Detail		 Chr5:135963394 Cpgi16773 within coordinates of
Rr378682 within coordinates of
Rr622480 within coordinates of
Tssr53780 17 bp downstream
Ywhag within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219267126
MGI SNP Detail		 Chr5:135963399 Cpgi16773 within coordinates of
Rr378682 within coordinates of
Rr622481 within coordinates of
Tssr53780 12 bp downstream
Ywhag within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32246504
MGI SNP Detail		 Chr5:135963419 Cpgi16773 within coordinates of
Rr378682 within coordinates of
Rr622481 within coordinates of
Tssr53780 within coordinates of
Ywhag within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs244375247
MGI SNP Detail		 Chr5:135963469 Cpgi16773 within coordinates of
Rr378682 within coordinates of
Rr622481 within coordinates of
Tssr53780 47 bp upstream
Ywhag within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C A C C C C C C A C C C C C C C C C C C
rs213790744
MGI SNP Detail		 Chr5:135963512 Cpgi16773 within coordinates of
Rr378682 within coordinates of
Rr622481 within coordinates of
Tssr53780 90 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233080175
MGI SNP Detail		 Chr5:135963587 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 165 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258911331
MGI SNP Detail		 Chr5:135963628 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 206 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32246505
MGI SNP Detail		 Chr5:135963689 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 267 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C G
rs239857628
MGI SNP Detail		 Chr5:135963696 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 274 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264442637
MGI SNP Detail		 Chr5:135963774 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 352 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32246506
MGI SNP Detail		 Chr5:135963819 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 397 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G A A G A G G G A G G G G G G A G G G G G G G A G G A A
rs236317680
MGI SNP Detail		 Chr5:135963897 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 475 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs249380644
MGI SNP Detail		 Chr5:135963931 Cpgi16773 within coordinates of
Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 509 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C
rs219827848
MGI SNP Detail		 Chr5:135963963 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr49205 within coordinates of
Tssr53780 541 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A
rs247592386
MGI SNP Detail		 Chr5:135964082 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 660 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs263501803
MGI SNP Detail		 Chr5:135964095 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 673 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs226089362
MGI SNP Detail		 Chr5:135964175 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 753 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248289481
MGI SNP Detail		 Chr5:135964209 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 787 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32246507
MGI SNP Detail		 Chr5:135964212 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 790 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224968231
MGI SNP Detail		 Chr5:135964251 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 829 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs244313461
MGI SNP Detail		 Chr5:135964263 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 841 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257619401
MGI SNP Detail		 Chr5:135964264 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 842 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231065884
MGI SNP Detail		 Chr5:135964266 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 844 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs32246508
MGI SNP Detail		 Chr5:135964284 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 862 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs32246509
MGI SNP Detail		 Chr5:135964365 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 943 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs242378108
MGI SNP Detail		 Chr5:135964411 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 989 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C C C C C T
rs29728175
MGI SNP Detail		 Chr5:135964428 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1006 bp upstream
 SNP G/T G T T T
rs212416971
MGI SNP Detail		 Chr5:135964480 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1058 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs231046675
MGI SNP Detail		 Chr5:135964521 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1099 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A
rs249375715
MGI SNP Detail		 Chr5:135964525 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1103 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs219823416
MGI SNP Detail		 Chr5:135964625 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1203 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32246510
MGI SNP Detail		 Chr5:135964626 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1204 bp upstream
 SNP C/T T C T C T C
rs263235502
MGI SNP Detail		 Chr5:135964636 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1214 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225556755
MGI SNP Detail		 Chr5:135964656 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1234 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32246511
MGI SNP Detail		 Chr5:135964661 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1239 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs586085358
MGI SNP Detail		 Chr5:135964675 Gm57297 within coordinates of
Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1253 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G
rs255923403
MGI SNP Detail		 Chr5:135964755 Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1333 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218804333
MGI SNP Detail		 Chr5:135964778 Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1356 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238878256
MGI SNP Detail		 Chr5:135964866 Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1444 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257598792
MGI SNP Detail		 Chr5:135964966 Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1544 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs231295063
MGI SNP Detail		 Chr5:135964967 Rr378682 within coordinates of
Rr622482 within coordinates of
Tssr53780 1545 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs252359152
MGI SNP Detail		 Chr5:135965000 Rr378682 within coordinates of
Tssr53780 1578 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265750246
MGI SNP Detail		 Chr5:135965001 Rr378682 within coordinates of
Tssr53780 1579 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T
rs582026815
MGI SNP Detail		 Chr5:135965005 Rr378682 within coordinates of
Tssr53780 1583 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585460728
MGI SNP Detail		 Chr5:135965020 Rr378682 within coordinates of
Tssr53780 1598 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233285171
MGI SNP Detail		 Chr5:135965030 Rr378682 within coordinates of
Tssr53780 1608 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs247664498
MGI SNP Detail		 Chr5:135965033 Rr378682 within coordinates of
Tssr53780 1611 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212403265
MGI SNP Detail		 Chr5:135965041 Rr378682 within coordinates of
Tssr53780 1619 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231041931
MGI SNP Detail		 Chr5:135965065 Rr378682 within coordinates of
Tssr53780 1643 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244214998
MGI SNP Detail		 Chr5:135965127 Rr378682 within coordinates of
Tssr53780 1705 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs214068433
MGI SNP Detail		 Chr5:135965128 Rr378682 within coordinates of
Tssr53780 1706 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239534003
MGI SNP Detail		 Chr5:135965134 Rr378682 within coordinates of
Tssr53780 1712 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259112173
MGI SNP Detail		 Chr5:135965290 Rr378682 within coordinates of
Tssr53780 1868 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225869137
MGI SNP Detail		 Chr5:135965342 Rr378682 within coordinates of
Tssr53780 1920 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 87 of 87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory