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Mouse SNP Summary
Symbol
Name
ID 		Tssr53840
transcription start site region 53840
MGI:5981607

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251557472
MGI SNP Detail		 Chr5:136485453 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1908 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs32258777
MGI SNP Detail		 Chr5:136485478 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1883 bp downstream
 SNP A/G G G A G A G A
rs241637551
MGI SNP Detail		 Chr5:136485486 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1875 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32258778
MGI SNP Detail		 Chr5:136485560 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1801 bp downstream
 SNP A/G A G
rs32258779
MGI SNP Detail		 Chr5:136485589 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1772 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G C G C G G G G G G G G G G G G G G G G G G G G G G C G
rs237959649
MGI SNP Detail		 Chr5:136485622 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1739 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251133221
MGI SNP Detail		 Chr5:136485771 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1590 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220147033
MGI SNP Detail		 Chr5:136485915 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1446 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216729004
MGI SNP Detail		 Chr5:136485955 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1406 bp downstream
 SNP C/T T C
rs265707615
MGI SNP Detail		 Chr5:136485973 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1388 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232456553
MGI SNP Detail		 Chr5:136485994 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1367 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250208094
MGI SNP Detail		 Chr5:136485999 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1362 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs32258780
MGI SNP Detail		 Chr5:136486008 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1353 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs228414042
MGI SNP Detail		 Chr5:136486037 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1324 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G A G A G G G G G G G G G G G G G G G G G G G G G G A A
rs231463722
MGI SNP Detail		 Chr5:136486078 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1283 bp downstream
 SNP A/G A G
rs579900995
MGI SNP Detail		 Chr5:136486086 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1275 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213941232
MGI SNP Detail		 Chr5:136486090 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1271 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G A G A G G G G G G G G G G G G G G G G G G G G G G A
rs245606544
MGI SNP Detail		 Chr5:136486139 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1222 bp downstream
 SNP A/G A A A G A A G G G G G A A A A G A A A G G A G G G A A A G G A G A G G A A G A G G G G G A A G A
rs217552278
MGI SNP Detail		 Chr5:136486146 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1215 bp downstream
 SNP C/T T T T C T T C C C C T T T T C C T T C C T C C C C C T T C T C T T C C C C T T C
rs239177783
MGI SNP Detail		 Chr5:136486151 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1210 bp downstream
 SNP A/G A A A G A A G G G G A A A A A A A G G A G G G A A A A G A G A A G A G G G G A A
rs583096948
MGI SNP Detail		 Chr5:136486200 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1161 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs387006965
MGI SNP Detail		 Chr5:136486244 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1117 bp downstream
 SNP A/G A A A A A G G G A A A A A A A A G G A A A A G A G G G A A G A G G G A A A
rs584788890
MGI SNP Detail		 Chr5:136486256 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1105 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587529691
MGI SNP Detail		 Chr5:136486282 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1079 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G A G G G G G G G G G G G
rs581575141
MGI SNP Detail		 Chr5:136486284 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1077 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G G G G G G A G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs49743023
MGI SNP Detail		 Chr5:136486304 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1057 bp downstream
 SNP A/G A A A G A A G G G G G G A A A A G A A A G G A G G G A A A A G G A G A G G G A A G A G G G G G G A G A A
rs50214986
MGI SNP Detail		 Chr5:136486316 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1045 bp downstream
 SNP A/G G G G A G G A A A A A A G G G G A G G G A A G A A A G G G G A A G A G A A A G G A G A A A A A G G A G G
rs230425248
MGI SNP Detail		 Chr5:136486389 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 972 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251005390
MGI SNP Detail		 Chr5:136486505 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 856 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs32258781
MGI SNP Detail		 Chr5:136486571 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 790 bp downstream
 SNP A/C C A A C A
rs578313567
MGI SNP Detail		 Chr5:136486606 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 755 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240355073
MGI SNP Detail		 Chr5:136486620 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 741 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs259452414
MGI SNP Detail		 Chr5:136486624 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 737 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C
rs226126996
MGI SNP Detail		 Chr5:136486784 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 577 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247551326
MGI SNP Detail		 Chr5:136486818 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 543 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33670376
MGI SNP Detail		 Chr5:136486862 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 499 bp downstream
 SNP A/T A T A T A T
rs33676320
MGI SNP Detail		 Chr5:136486874 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 487 bp downstream
 SNP C/T C T C T C T
rs236919319
MGI SNP Detail		 Chr5:136486886 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 475 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255545298
MGI SNP Detail		 Chr5:136486889 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 472 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32258782
MGI SNP Detail		 Chr5:136487048 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 313 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T
rs257556851
MGI SNP Detail		 Chr5:136487067 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 294 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs263829614
MGI SNP Detail		 Chr5:136487104 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 257 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C C C C C C C C G C C C C C C C C C C C C
rs32258783
MGI SNP Detail		 Chr5:136487108 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 253 bp downstream
 SNP C/T T C T C T C
rs255055101
MGI SNP Detail		 Chr5:136487132 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 229 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32259624
MGI SNP Detail		 Chr5:136487195 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 166 bp downstream
 SNP A/G A A G A G G G
rs230301344
MGI SNP Detail		 Chr5:136487242 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 119 bp downstream
 SNP C/G/T C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C T
rs244793551
MGI SNP Detail		 Chr5:136487268 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 93 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214146792
MGI SNP Detail		 Chr5:136487322 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53839 within coordinates of
Tssr53840 39 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32259625
MGI SNP Detail		 Chr5:136487355 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 6 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs239380262
MGI SNP Detail		 Chr5:136487368 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 within coordinates of
 SNP C/G G C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225611522
MGI SNP Detail		 Chr5:136487759 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 385 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32259626
MGI SNP Detail		 Chr5:136487775 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 401 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs32259627
MGI SNP Detail		 Chr5:136487833 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 459 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C T
rs218031436
MGI SNP Detail		 Chr5:136487867 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 493 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs236727538
MGI SNP Detail		 Chr5:136487931 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 557 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582266174
MGI SNP Detail		 Chr5:136488009 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 635 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs220161615
MGI SNP Detail		 Chr5:136488016 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 642 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs245454394
MGI SNP Detail		 Chr5:136488023 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 649 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs265794323
MGI SNP Detail		 Chr5:136488035 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 661 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs233358696
MGI SNP Detail		 Chr5:136488040 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 666 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260583173
MGI SNP Detail		 Chr5:136488109 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 735 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32259629
MGI SNP Detail		 Chr5:136488127 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 753 bp upstream
 SNP C/T C T C T C T
rs32259630
MGI SNP Detail		 Chr5:136488153 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 779 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C T C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs244674108
MGI SNP Detail		 Chr5:136488177 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 803 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C T C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs214202508
MGI SNP Detail		 Chr5:136488184 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 810 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G C G C G G C G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs233656215
MGI SNP Detail		 Chr5:136488228 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 854 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32259631
MGI SNP Detail		 Chr5:136488246 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 872 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs32259632
MGI SNP Detail		 Chr5:136488265 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 891 bp upstream
 SNP A/G G A G A G A
rs240136655
MGI SNP Detail		 Chr5:136488319 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 945 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260879887
MGI SNP Detail		 Chr5:136488324 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 950 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs32259633
MGI SNP Detail		 Chr5:136488376 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1002 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C G C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs32260494
MGI SNP Detail		 Chr5:136488468 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1094 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G A G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs249801224
MGI SNP Detail		 Chr5:136488535 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1161 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220076202
MGI SNP Detail		 Chr5:136488581 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1207 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248060802
MGI SNP Detail		 Chr5:136488831 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1457 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T C T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32260495
MGI SNP Detail		 Chr5:136488951 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1577 bp upstream
 SNP A/G G G A A G A
rs32260496
MGI SNP Detail		 Chr5:136488964 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1590 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G A G A A A A A A A A A A A A A A A A A A A A A A G A
rs248593353
MGI SNP Detail		 Chr5:136489002 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1628 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G A G G G G G G G G G G G G G G G G G G G G G G A G
rs256393045
MGI SNP Detail		 Chr5:136489097 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1723 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225305391
MGI SNP Detail		 Chr5:136489130 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1756 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C A C A C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs239261402
MGI SNP Detail		 Chr5:136489192 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1818 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258059298
MGI SNP Detail		 Chr5:136489300 Cux1 within coordinates of
Rr127452 within coordinates of
Tssr53840 1926 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A G A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
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Showing SNP(s) 1 - 82 of 82
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory