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Mouse SNP Summary
Symbol
Name
ID 		Tssr54579
transcription start site region 54579
MGI:5982346

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs13467205
MGI SNP Detail		 Chr5:148488847 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625194 within coordinates of
Tssr54579 1956 bp downstream
Ubl3 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs244320518
MGI SNP Detail		 Chr5:148488918 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625194 within coordinates of
Tssr54571 within coordinates of
Tssr54579 1885 bp downstream
Ubl3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C T
rs261069635
MGI SNP Detail		 Chr5:148489025 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625194 within coordinates of
Tssr54572 within coordinates of
Tssr54579 1778 bp downstream
Ubl3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G
rs221820015
MGI SNP Detail		 Chr5:148489221 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625194 within coordinates of
Tssr54574 within coordinates of
Tssr54579 1582 bp downstream
Ubl3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250446998
MGI SNP Detail		 Chr5:148489473 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54576 within coordinates of
Tssr54579 1330 bp downstream
Ubl3 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs261495398
MGI SNP Detail		 Chr5:148489608 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Rr625196 within coordinates of
Tssr54577 within coordinates of
Tssr54579 1195 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G
rs230706671
MGI SNP Detail		 Chr5:148489615 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Rr625196 within coordinates of
Tssr54577 within coordinates of
Tssr54579 1188 bp downstream
 SNP C/G C G
rs241643104
MGI SNP Detail		 Chr5:148489624 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Rr625196 within coordinates of
Tssr54577 within coordinates of
Tssr54579 1179 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G
rs260904114
MGI SNP Detail		 Chr5:148489684 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54579 1119 bp downstream
 SNP C/T C T
rs229876711
MGI SNP Detail		 Chr5:148489770 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54579 1033 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs251192916
MGI SNP Detail		 Chr5:148489822 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54579 981 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs211855322
MGI SNP Detail		 Chr5:148489853 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54579 950 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G
rs228474569
MGI SNP Detail		 Chr5:148489855 Cpgi17076 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54579 948 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs246559218
MGI SNP Detail		 Chr5:148490006 Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54579 797 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs223343325
MGI SNP Detail		 Chr5:148490011 Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625195 within coordinates of
Tssr54579 792 bp downstream
 SNP C/T T C
rs49124545
MGI SNP Detail		 Chr5:148490120 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Tssr54579 683 bp downstream
 SNP A/G A A G G A
rs251955472
MGI SNP Detail		 Chr5:148490164 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 639 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213857041
MGI SNP Detail		 Chr5:148490206 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 597 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs239015355
MGI SNP Detail		 Chr5:148490304 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 499 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255571863
MGI SNP Detail		 Chr5:148490343 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 460 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221258487
MGI SNP Detail		 Chr5:148490345 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 458 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242199141
MGI SNP Detail		 Chr5:148490346 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 457 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs255510234
MGI SNP Detail		 Chr5:148490347 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 456 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs33616702
MGI SNP Detail		 Chr5:148490413 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 390 bp downstream
 SNP A/G G G G A A A G
rs241604595
MGI SNP Detail		 Chr5:148490466 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 337 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257871530
MGI SNP Detail		 Chr5:148490545 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 258 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231271544
MGI SNP Detail		 Chr5:148490632 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 171 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246470902
MGI SNP Detail		 Chr5:148490638 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 165 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261268370
MGI SNP Detail		 Chr5:148490649 1700013A02Rik within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625197 within coordinates of
Tssr54579 154 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs228942210
MGI SNP Detail		 Chr5:148490662 1700013A02Rik within coordinates of
Gm72666 within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Tssr54579 141 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs246525063
MGI SNP Detail		 Chr5:148490690 Gm72666 within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Tssr54578 within coordinates of
Tssr54579 113 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs580583606
MGI SNP Detail		 Chr5:148490725 Gm72666 within coordinates of
Gm72684 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 78 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259725451
MGI SNP Detail		 Chr5:148490772 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 31 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226772327
MGI SNP Detail		 Chr5:148490773 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 30 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs245866536
MGI SNP Detail		 Chr5:148490833 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs29579999
MGI SNP Detail		 Chr5:148490850 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 15 bp upstream
 SNP A/G G A A A G
rs236984670
MGI SNP Detail		 Chr5:148490859 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 24 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252681942
MGI SNP Detail		 Chr5:148490868 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 33 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs33037831
MGI SNP Detail		 Chr5:148490880 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 45 bp upstream
 SNP A/G G A A A G
rs235683156
MGI SNP Detail		 Chr5:148490888 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 53 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255475391
MGI SNP Detail		 Chr5:148490891 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 56 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221167989
MGI SNP Detail		 Chr5:148490907 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 72 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs235023236
MGI SNP Detail		 Chr5:148490963 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625198 within coordinates of
Tssr54579 128 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs257366854
MGI SNP Detail		 Chr5:148491024 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 189 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs223574064
MGI SNP Detail		 Chr5:148491042 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 207 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs47008037
MGI SNP Detail		 Chr5:148491082 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 247 bp upstream
 SNP A/G A G
rs50845699
MGI SNP Detail		 Chr5:148491092 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 257 bp upstream
 SNP C/G G G C G
rs218415472
MGI SNP Detail		 Chr5:148491094 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 259 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51713445
MGI SNP Detail		 Chr5:148491130 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 295 bp upstream
 SNP C C C
rs33243250
MGI SNP Detail		 Chr5:148491131 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 296 bp upstream
 SNP G/T T G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50914776
MGI SNP Detail		 Chr5:148491166 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 331 bp upstream
 SNP A/G A G A
rs259585993
MGI SNP Detail		 Chr5:148491181 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 346 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs264760211
MGI SNP Detail		 Chr5:148491183 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 348 bp upstream
 SNP C/T T C
rs245835805
MGI SNP Detail		 Chr5:148491187 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 352 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47523514
MGI SNP Detail		 Chr5:148491211 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 376 bp upstream
 SNP A A
rs231123617
MGI SNP Detail		 Chr5:148491234 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 399 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs249148671
MGI SNP Detail		 Chr5:148491250 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 415 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs33468663
MGI SNP Detail		 Chr5:148491278 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 443 bp upstream
 SNP A/C A C C A
rs33249150
MGI SNP Detail		 Chr5:148491326 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 491 bp upstream
 SNP A/T T T A A T
rs248895896
MGI SNP Detail		 Chr5:148491332 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 497 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs215319465
MGI SNP Detail		 Chr5:148491435 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 600 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs234982925
MGI SNP Detail		 Chr5:148491540 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 705 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs29674101
MGI SNP Detail		 Chr5:148491553 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 718 bp upstream
 SNP C/G C G C
rs33548608
MGI SNP Detail		 Chr5:148491594 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 759 bp upstream
 SNP G/T T T G G T
rs6336242
MGI SNP Detail		 Chr5:148491645 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 810 bp upstream
 SNP A/G A G
rs29728015
MGI SNP Detail		 Chr5:148491646 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 811 bp upstream
 SNP C/T C T T T C
rs222286384
MGI SNP Detail		 Chr5:148491720 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 885 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs240467547
MGI SNP Detail		 Chr5:148491723 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 888 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6239438
MGI SNP Detail		 Chr5:148491790 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 955 bp upstream
 SNP A/C C A
rs220525504
MGI SNP Detail		 Chr5:148491810 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 975 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246129167
MGI SNP Detail		 Chr5:148491826 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 991 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265036611
MGI SNP Detail		 Chr5:148491839 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1004 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29628544
MGI SNP Detail		 Chr5:148491841 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1006 bp upstream
 SNP C/G G G C C C G
rs29526200
MGI SNP Detail		 Chr5:148491842 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1007 bp upstream
 SNP C/G G G C C C G
rs261912861
MGI SNP Detail		 Chr5:148491860 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1025 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228540431
MGI SNP Detail		 Chr5:148491867 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1032 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs48667048
MGI SNP Detail		 Chr5:148491901 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1066 bp upstream
 SNP A/G A G G G A
rs215283998
MGI SNP Detail		 Chr5:148491940 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1105 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs228183663
MGI SNP Detail		 Chr5:148492020 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1185 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs52571631
MGI SNP Detail		 Chr5:148492171 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1336 bp upstream
 SNP C/T T C
rs215490373
MGI SNP Detail		 Chr5:148492185 Gm72666 within coordinates of
Rr378792 within coordinates of
Rr625199 within coordinates of
Tssr54579 1350 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs234905599
MGI SNP Detail		 Chr5:148492209 Gm72666 within coordinates of
Rr378792 within coordinates of
Tssr54579 1374 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215207466
MGI SNP Detail		 Chr5:148492227 Gm72666 within coordinates of
Rr378792 within coordinates of
Tssr54579 1392 bp upstream
 SNP A/G G A
rs236207373
MGI SNP Detail		 Chr5:148492234 Gm72666 within coordinates of
Rr378792 within coordinates of
Tssr54579 1399 bp upstream
 SNP C/T C T
rs235525464
MGI SNP Detail		 Chr5:148492235 Gm72666 within coordinates of
Rr378792 within coordinates of
Tssr54579 1400 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252933958
MGI SNP Detail		 Chr5:148492241 Gm72666 within coordinates of
Rr378792 within coordinates of
Tssr54579 1406 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220497799
MGI SNP Detail		 Chr5:148492346 Gm72666 within coordinates of
Rr378792 within coordinates of
Tssr54579 1511 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248656587
MGI SNP Detail		 Chr5:148492417 Gm72666 within coordinates of
Tssr54579 1582 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256822981
MGI SNP Detail		 Chr5:148492437 Gm72666 within coordinates of
Tssr54579 1602 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222892111
MGI SNP Detail		 Chr5:148492439 Gm72666 within coordinates of
Tssr54579 1604 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33125229
MGI SNP Detail		 Chr5:148492501 Gm72666 within coordinates of
Tssr54579 1666 bp upstream
 SNP G/T G G T G G
rs33218534
MGI SNP Detail		 Chr5:148492531 Gm72666 within coordinates of
Tssr54579 1696 bp upstream
 SNP G/T G G T G G
rs583313672
MGI SNP Detail		 Chr5:148492533 Gm72666 within coordinates of
Tssr54579 1698 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586631328
MGI SNP Detail		 Chr5:148492535 Gm72666 within coordinates of
Tssr54579 1700 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33644517
MGI SNP Detail		 Chr5:148492644 Gm72666 within coordinates of
Tssr54579 1809 bp upstream
 SNP A/C A A A C C C A
rs228520930
MGI SNP Detail		 Chr5:148492730 Gm72666 within coordinates of
Tssr54579 1895 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242772489
MGI SNP Detail		 Chr5:148492734 Gm72666 within coordinates of
Tssr54579 1899 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259151184
MGI SNP Detail		 Chr5:148492745 Gm72666 within coordinates of
Tssr54579 1910 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232498515
MGI SNP Detail		 Chr5:148492788 Gm72666 within coordinates of
Tssr54579 1953 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T T
rs33176782
MGI SNP Detail		 Chr5:148492824 Gm72666 within coordinates of
Tssr54579 1989 bp upstream
 SNP A/G A A A G
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Showing SNP(s) 1 - 100 of 101
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory