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Mouse SNP Summary
Symbol
Name
ID 		Tssr54686
transcription start site region 54686
MGI:5982453

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47282754
MGI SNP Detail		 Chr5:151349624 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1991 bp downstream
 SNP A/G A G G
rs244293365
MGI SNP Detail		 Chr5:151349647 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1968 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs47141858
MGI SNP Detail		 Chr5:151349663 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1952 bp downstream
 SNP A/G G A A
rs48787087
MGI SNP Detail		 Chr5:151349684 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1931 bp downstream
 SNP C/T T C C
rs247002655
MGI SNP Detail		 Chr5:151349723 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1892 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49403553
MGI SNP Detail		 Chr5:151349752 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1863 bp downstream
 SNP A/G G A A
rs49234318
MGI SNP Detail		 Chr5:151349761 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1854 bp downstream
 SNP A/G G A A
rs258579487
MGI SNP Detail		 Chr5:151349773 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1842 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214058007
MGI SNP Detail		 Chr5:151349795 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1820 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50273295
MGI SNP Detail		 Chr5:151349841 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1774 bp downstream
 SNP C/T C C T T T C T C T T T C T T C T
rs579620493
MGI SNP Detail		 Chr5:151349908 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1707 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49679061
MGI SNP Detail		 Chr5:151349964 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1651 bp downstream
 SNP C/T T C C
rs45813333
MGI SNP Detail		 Chr5:151349967 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1648 bp downstream
 SNP A/T T A A
rs51107595
MGI SNP Detail		 Chr5:151350012 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1603 bp downstream
 SNP G/T G G T T T G T G T T T G T T G T
rs260283236
MGI SNP Detail		 Chr5:151350039 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1576 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227105862
MGI SNP Detail		 Chr5:151350047 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1568 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245101908
MGI SNP Detail		 Chr5:151350161 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1454 bp downstream
 SNP C/T T T C C C C C T C C C C C C C C C C T C C T C C C C T C C C T C T C C C C C C T C C C C C C C C C C C C
rs265674605
MGI SNP Detail		 Chr5:151350162 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1453 bp downstream
 SNP C/T C C T T T T T C T T T T T T T T T T C T T C T T T T C T T T C T C T T T T T T C T T T T T T T T T T T T
rs219194760
MGI SNP Detail		 Chr5:151350163 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1452 bp downstream
 SNP G/T T T G G G G G T G G G G G G G G G G T G G T G G G G T G G G T G T G G G G G G T G G G G G G G G G G G G
rs586418131
MGI SNP Detail		 Chr5:151350180 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1435 bp downstream
 SNP G/T G G T T T T T G T T T T T T T T T T G T T G T T T T T T T G T G T T T T T T G T T T T T T T T T T T T
rs580376131
MGI SNP Detail		 Chr5:151350182 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1433 bp downstream
 SNP C/T C C T T T T T C T T T T T T T T T T C T T C T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs583858242
MGI SNP Detail		 Chr5:151350248 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1367 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253615008
MGI SNP Detail		 Chr5:151350253 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1362 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs46331876
MGI SNP Detail		 Chr5:151350297 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1318 bp downstream
 SNP A/G A G G
rs51407440
MGI SNP Detail		 Chr5:151350346 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1269 bp downstream
 SNP C/T T C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47500220
MGI SNP Detail		 Chr5:151350434 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Rr117371 within coordinates of
Tssr54686 1181 bp downstream
 SNP C/T T C
rs232551560
MGI SNP Detail		 Chr5:151350470 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Rr117371 within coordinates of
Tssr54686 1145 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs47922775
MGI SNP Detail		 Chr5:151350494 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Rr117371 within coordinates of
Tssr54686 1121 bp downstream
 SNP G/T G T G G G T G G G G G G G G
rs213880031
MGI SNP Detail		 Chr5:151350495 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Rr117371 within coordinates of
Tssr54686 1120 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233076287
MGI SNP Detail		 Chr5:151350542 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Rr117371 within coordinates of
Tssr54686 1073 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243739743
MGI SNP Detail		 Chr5:151350552 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Rr117371 within coordinates of
Tssr54686 1063 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213046350
MGI SNP Detail		 Chr5:151350602 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 1013 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs235628554
MGI SNP Detail		 Chr5:151350620 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 995 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33344640
MGI SNP Detail		 Chr5:151350661 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 954 bp downstream
 SNP A/G A G G G
rs226701534
MGI SNP Detail		 Chr5:151350685 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 930 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239899522
MGI SNP Detail		 Chr5:151350698 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 917 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259333785
MGI SNP Detail		 Chr5:151350713 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 902 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219230155
MGI SNP Detail		 Chr5:151350967 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 648 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs51521042
MGI SNP Detail		 Chr5:151350980 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 635 bp downstream
 SNP G/T G G G T G G G G T G G T G
rs51591565
MGI SNP Detail		 Chr5:151351021 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 594 bp downstream
 SNP C/T T T T C T T T T C T T C T
rs218450993
MGI SNP Detail		 Chr5:151351060 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 555 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247011894
MGI SNP Detail		 Chr5:151351063 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 552 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs266042574
MGI SNP Detail		 Chr5:151351096 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 519 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs232005960
MGI SNP Detail		 Chr5:151351136 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 479 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249551679
MGI SNP Detail		 Chr5:151351151 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 464 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257919667
MGI SNP Detail		 Chr5:151351169 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 446 bp downstream
 SNP C/T T T T C C C C C T C C C C C C C C C C C C C T C C C C T C C C T C T C C C C C C T C C C C C C C C C C C C
rs587240439
MGI SNP Detail		 Chr5:151351206 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 409 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226884435
MGI SNP Detail		 Chr5:151351213 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 402 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs243774989
MGI SNP Detail		 Chr5:151351226 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 389 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs213083305
MGI SNP Detail		 Chr5:151351258 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 357 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234255375
MGI SNP Detail		 Chr5:151351277 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 338 bp downstream
 SNP C/T C C C T T T T T C T T T T T T T T T T C T T C T T T T C T T T C T C T T T T T T C T T T T T T T T T T T T
rs254793840
MGI SNP Detail		 Chr5:151351314 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 301 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216206509
MGI SNP Detail		 Chr5:151351332 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 283 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237858527
MGI SNP Detail		 Chr5:151351380 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 235 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46293456
MGI SNP Detail		 Chr5:151351419 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 196 bp downstream
 SNP C/T C T T T C T T T T C T T C T
rs49908074
MGI SNP Detail		 Chr5:151351517 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 98 bp downstream
 SNP A/G A G G
rs51266719
MGI SNP Detail		 Chr5:151351566 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 49 bp downstream
 SNP A/T A T T
rs232050107
MGI SNP Detail		 Chr5:151351598 D730045B01Rik within coordinates of
Gm3704 within coordinates of
Gm42906 within coordinates of
Tssr54686 17 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248048860
MGI SNP Detail		 Chr5:151351680 Gm3704 within coordinates of
Tssr54686 53 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs50658131
MGI SNP Detail		 Chr5:151351696 Gm3704 within coordinates of
Tssr54686 69 bp upstream
 SNP T T T
rs249819223
MGI SNP Detail		 Chr5:151351719 Gm3704 within coordinates of
Tssr54686 92 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50470991
MGI SNP Detail		 Chr5:151351730 Gm3704 within coordinates of
Tssr54686 103 bp upstream
 SNP A/G G A A
rs48369225
MGI SNP Detail		 Chr5:151351733 Gm3704 within coordinates of
Tssr54686 106 bp upstream
 SNP A/G A G G
rs46723607
MGI SNP Detail		 Chr5:151351850 Gm3704 within coordinates of
Tssr54686 223 bp upstream
 SNP A/G G A G A G A A G A G G G A G A G
rs257961009
MGI SNP Detail		 Chr5:151352121 Gm3704 within coordinates of
Tssr54686 494 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs47975760
MGI SNP Detail		 Chr5:151352190 Gm3704 within coordinates of
Tssr54686 563 bp upstream
 SNP A/G A G
rs51064878
MGI SNP Detail		 Chr5:151352201 Gm3704 within coordinates of
Tssr54686 574 bp upstream
 SNP C C C
rs257005915
MGI SNP Detail		 Chr5:151352220 Gm3704 within coordinates of
Tssr54686 593 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs47659529
MGI SNP Detail		 Chr5:151352253 Gm3704 within coordinates of
Tssr54686 626 bp upstream
 SNP A/G A G G A G G G G A G G G
rs47972100
MGI SNP Detail		 Chr5:151352298 Gm3704 within coordinates of
Tssr54686 671 bp upstream
 SNP C/G C C C G C C C C G C C C
rs215930260
MGI SNP Detail		 Chr5:151352389 Gm3704 within coordinates of
Tssr54686 762 bp upstream
 SNP C/T C C C C C C C C C C C C C C C T C C T C C C C C C C C T C C C C C C T C C C C C C C C C C C C
rs233246019
MGI SNP Detail		 Chr5:151352391 Gm3704 within coordinates of
Tssr54686 764 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243884892
MGI SNP Detail		 Chr5:151352398 Gm3704 within coordinates of
Tssr54686 771 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46860880
MGI SNP Detail		 Chr5:151352407 Gm3704 within coordinates of
Tssr54686 780 bp upstream
 SNP C/G C C C C G C C C C G C C C C
rs47257744
MGI SNP Detail		 Chr5:151352484 Gm3704 within coordinates of
Tssr54686 857 bp upstream
 SNP A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs248075949
MGI SNP Detail		 Chr5:151352489 Gm3704 within coordinates of
Tssr54686 862 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213042497
MGI SNP Detail		 Chr5:151352493 Gm3704 within coordinates of
Tssr54686 866 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs45962408
MGI SNP Detail		 Chr5:151352555 Gm3704 within coordinates of
Tssr54686 928 bp upstream
 SNP T T
rs264114922
MGI SNP Detail		 Chr5:151352655 Gm3704 within coordinates of
Tssr54686 1028 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223976140
MGI SNP Detail		 Chr5:151352713 Gm3704 within coordinates of
Tssr54686 1086 bp upstream
 SNP A/G G G G A A A A A G A A A A A A A A A A G A A G A A A A G A G A G A G A A A A A A G A A A A A A A A A A A G
rs240620213
MGI SNP Detail		 Chr5:151352718 Gm3704 within coordinates of
Tssr54686 1091 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs250896380
MGI SNP Detail		 Chr5:151352739 Gm3704 within coordinates of
Tssr54686 1112 bp upstream
 SNP C/T T T T C C C C C T C C C C C C C C C C C C C T C C C C T C C C T C T C C C C C C T C C C C C C C C C C C C
rs220647834
MGI SNP Detail		 Chr5:151352753 Gm3704 within coordinates of
Tssr54686 1126 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237596929
MGI SNP Detail		 Chr5:151352768 Gm3704 within coordinates of
Tssr54686 1141 bp upstream
 SNP A/G G G G A A A A A G A A A A A A A A A A A A A G A A A A G A A A G A G A A A A A A G A A A A A A A A A A A A
rs257042664
MGI SNP Detail		 Chr5:151352792 Gm3704 within coordinates of
Tssr54686 1165 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33118666
MGI SNP Detail		 Chr5:151352878 Gm3704 within coordinates of
Tssr54686 1251 bp upstream
 SNP A/G A G G
rs248628410
MGI SNP Detail		 Chr5:151352948 Gm3704 within coordinates of
Tssr54686 1321 bp upstream
 SNP A/G G G G A A A A A G A A A A A A A A A A G A A G A A A A G A G A G A G A A A A A A G A A A A A A A G A A A G
rs29825780
MGI SNP Detail		 Chr5:151352959 Gm3704 within coordinates of
Tssr54686 1332 bp upstream
 SNP A/G A G G
rs232528502
MGI SNP Detail		 Chr5:151353038 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1411 bp upstream
 SNP A/T A A A T T T T T A T T T T T T T T T T A T T A T T T T A T T T A T A T T T T T T A T T T T T T T T T T T T
rs243921109
MGI SNP Detail		 Chr5:151353112 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1485 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256351572
MGI SNP Detail		 Chr5:151353165 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1538 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs33589582
MGI SNP Detail		 Chr5:151353255 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1628 bp upstream
 SNP C/T T C C C T C C C C T C C C C
rs242243858
MGI SNP Detail		 Chr5:151353258 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1631 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212798687
MGI SNP Detail		 Chr5:151353283 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1656 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29723034
MGI SNP Detail		 Chr5:151353321 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1694 bp upstream
 SNP A/G G A A A
rs33662140
MGI SNP Detail		 Chr5:151353338 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1711 bp upstream
 SNP G/T G T T T G
rs29550697
MGI SNP Detail		 Chr5:151353343 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1716 bp upstream
 SNP G/T G T T T T T T T G G T T G T
rs29534103
MGI SNP Detail		 Chr5:151353368 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1741 bp upstream
 SNP C/T T C C C T C C C C C T C C C C
rs33298782
MGI SNP Detail		 Chr5:151353595 Gm3704 within coordinates of
Rr378823 within coordinates of
Tssr54686 1968 bp upstream
 SNP C/T C T T T C T T T T T T C T T T T
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Showing SNP(s) 1 - 99 of 99
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory