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Mouse SNP Summary
Symbol
Name
ID 		Tssr55046
transcription start site region 55046
MGI:5982813

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs230570060
MGI SNP Detail		 Chr6:17337505 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1972 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C
rs256876700
MGI SNP Detail		 Chr6:17337546 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1931 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A C A A A A
rs216612590
MGI SNP Detail		 Chr6:17337560 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1917 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs234269531
MGI SNP Detail		 Chr6:17337572 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1905 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs247445634
MGI SNP Detail		 Chr6:17337573 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1904 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211940199
MGI SNP Detail		 Chr6:17337636 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1841 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs230630888
MGI SNP Detail		 Chr6:17337737 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1740 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257209600
MGI SNP Detail		 Chr6:17337902 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1575 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223349020
MGI SNP Detail		 Chr6:17337915 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1562 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs237926578
MGI SNP Detail		 Chr6:17337968 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1509 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs263406571
MGI SNP Detail		 Chr6:17338048 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1429 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C T C
rs225861290
MGI SNP Detail		 Chr6:17338100 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1377 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs243095484
MGI SNP Detail		 Chr6:17338110 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1367 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs256414632
MGI SNP Detail		 Chr6:17338127 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1350 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219077108
MGI SNP Detail		 Chr6:17338166 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1311 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs239184614
MGI SNP Detail		 Chr6:17338182 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1295 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs262241482
MGI SNP Detail		 Chr6:17338184 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1293 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs580031907
MGI SNP Detail		 Chr6:17338192 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1285 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs230926079
MGI SNP Detail		 Chr6:17338253 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1224 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs252088955
MGI SNP Detail		 Chr6:17338340 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1137 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs265624269
MGI SNP Detail		 Chr6:17338381 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1096 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T
rs228044661
MGI SNP Detail		 Chr6:17338382 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1095 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G A G G G A G G G G G G A G G G G G G G G G G G A
rs247400422
MGI SNP Detail		 Chr6:17338409 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1068 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212050663
MGI SNP Detail		 Chr6:17338434 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1043 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230557013
MGI SNP Detail		 Chr6:17338539 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 938 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255114440
MGI SNP Detail		 Chr6:17338552 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 925 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs214910828
MGI SNP Detail		 Chr6:17338556 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 921 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs240163371
MGI SNP Detail		 Chr6:17338741 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 736 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259659382
MGI SNP Detail		 Chr6:17338761 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 716 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs222746584
MGI SNP Detail		 Chr6:17338864 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 613 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs236470458
MGI SNP Detail		 Chr6:17338896 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 581 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs249956130
MGI SNP Detail		 Chr6:17338907 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 570 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs219218429
MGI SNP Detail		 Chr6:17338908 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 569 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs239146769
MGI SNP Detail		 Chr6:17338909 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 568 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262596874
MGI SNP Detail		 Chr6:17338984 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 493 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs224494154
MGI SNP Detail		 Chr6:17339050 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 427 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs247528248
MGI SNP Detail		 Chr6:17339059 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 418 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263476616
MGI SNP Detail		 Chr6:17339072 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 405 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227956040
MGI SNP Detail		 Chr6:17339088 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 389 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241256515
MGI SNP Detail		 Chr6:17339252 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 225 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A G
rs253849375
MGI SNP Detail		 Chr6:17339586 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 94 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224353735
MGI SNP Detail		 Chr6:17339656 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 164 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T
rs250715782
MGI SNP Detail		 Chr6:17339681 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 189 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs584711593
MGI SNP Detail		 Chr6:17339795 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 303 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214963769
MGI SNP Detail		 Chr6:17339798 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 306 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587330943
MGI SNP Detail		 Chr6:17339807 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 315 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs231578683
MGI SNP Detail		 Chr6:17339836 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 344 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258425909
MGI SNP Detail		 Chr6:17339838 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 346 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs216843479
MGI SNP Detail		 Chr6:17339857 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 365 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C G C
rs236431581
MGI SNP Detail		 Chr6:17339905 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 413 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T G T T T T T T G T T T T T T T T T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs249702525
MGI SNP Detail		 Chr6:17339958 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 466 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs212983872
MGI SNP Detail		 Chr6:17339991 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 499 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T C C
rs238547082
MGI SNP Detail		 Chr6:17340008 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 516 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258273204
MGI SNP Detail		 Chr6:17340020 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 528 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs224524642
MGI SNP Detail		 Chr6:17340034 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 542 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246745698
MGI SNP Detail		 Chr6:17340089 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 597 bp downstream
Tssr55047 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs251710016
MGI SNP Detail		 Chr6:17340155 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 663 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs221830654
MGI SNP Detail		 Chr6:17340227 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 735 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs241225676
MGI SNP Detail		 Chr6:17340228 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 736 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs253596770
MGI SNP Detail		 Chr6:17340249 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 757 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs224010809
MGI SNP Detail		 Chr6:17340305 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 813 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G G G G G C G G G G
rs245930529
MGI SNP Detail		 Chr6:17340347 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 855 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs262785080
MGI SNP Detail		 Chr6:17340365 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 873 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs231921476
MGI SNP Detail		 Chr6:17340376 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 884 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs253061740
MGI SNP Detail		 Chr6:17340434 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 942 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs216808160
MGI SNP Detail		 Chr6:17340449 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 957 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs229369351
MGI SNP Detail		 Chr6:17340493 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1001 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs243716226
MGI SNP Detail		 Chr6:17340494 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1002 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212941629
MGI SNP Detail		 Chr6:17340565 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1073 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236314742
MGI SNP Detail		 Chr6:17340582 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1090 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262636620
MGI SNP Detail		 Chr6:17340617 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1125 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216174090
MGI SNP Detail		 Chr6:17340639 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1147 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241403615
MGI SNP Detail		 Chr6:17340653 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1161 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252829377
MGI SNP Detail		 Chr6:17340705 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1213 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs223021452
MGI SNP Detail		 Chr6:17340718 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1226 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30507040
MGI SNP Detail		 Chr6:17340736 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1244 bp downstream
 SNP G/T G G G G G G T G G G G T G G
rs248013379
MGI SNP Detail		 Chr6:17340742 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr143503 within coordinates of
Tssr55046 1250 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs220661463
MGI SNP Detail		 Chr6:17340841 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr148589 within coordinates of
Tssr55046 1349 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242751249
MGI SNP Detail		 Chr6:17340853 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr148589 within coordinates of
Tssr55046 1361 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265271534
MGI SNP Detail		 Chr6:17340891 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr148589 within coordinates of
Tssr55046 1399 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs29834111
MGI SNP Detail		 Chr6:17340895 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr148589 within coordinates of
Tssr55046 1403 bp downstream
 SNP C/T T T T T T T C T T T T C T T
rs241266278
MGI SNP Detail		 Chr6:17340957 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr148589 within coordinates of
Tssr55046 1465 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs30812676
MGI SNP Detail		 Chr6:17340990 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Rr148589 within coordinates of
Tssr55046 1498 bp downstream
 SNP A/T A A A A A A T A A A A T A A
rs229154824
MGI SNP Detail		 Chr6:17341206 Cav1 within coordinates of
Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1714 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243677144
MGI SNP Detail		 Chr6:17341351 Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1859 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs256949805
MGI SNP Detail		 Chr6:17341391 Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1899 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs230248040
MGI SNP Detail		 Chr6:17341395 Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1903 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251610019
MGI SNP Detail		 Chr6:17341450 Gm15581 within coordinates of
Gm68216 within coordinates of
Tssr55046 1958 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 88 of 88
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory