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Mouse SNP Summary
Symbol
Name
ID 		Tssr55475
transcription start site region 55475
MGI:5983242

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243109803
MGI SNP Detail		 Chr6:32486276 Plxna4 within coordinates of
Tssr55475 1838 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs36933822
MGI SNP Detail		 Chr6:32486335 Plxna4 within coordinates of
Tssr55475 1779 bp upstream
 SNP C/T C C C C C C C C T C C C C C C
rs387631659
MGI SNP Detail		 Chr6:32486358 Plxna4 within coordinates of
Tssr55475 1756 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A G G A A A G A A A G G A A A A A G A A A G A A A A G G A G A A A A G G A A
rs253233044
MGI SNP Detail		 Chr6:32486384 Plxna4 within coordinates of
Tssr55475 1730 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223863476
MGI SNP Detail		 Chr6:32486426 Plxna4 within coordinates of
Tssr55475 1688 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs248550403
MGI SNP Detail		 Chr6:32486630 Plxna4 within coordinates of
Tssr55475 1484 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs262238432
MGI SNP Detail		 Chr6:32486682 Plxna4 within coordinates of
Tssr55475 1432 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36564784
MGI SNP Detail		 Chr6:32486697 Plxna4 within coordinates of
Tssr55475 1417 bp upstream
 SNP A/T T T T T T T A T T T T T T T T
rs235727807
MGI SNP Detail		 Chr6:32486729 Plxna4 within coordinates of
Tssr55475 1385 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs254503649
MGI SNP Detail		 Chr6:32486822 Plxna4 within coordinates of
Tssr55475 1292 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228254186
MGI SNP Detail		 Chr6:32486867 Plxna4 within coordinates of
Tssr55475 1247 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247363225
MGI SNP Detail		 Chr6:32486883 Plxna4 within coordinates of
Tssr55475 1231 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216168969
MGI SNP Detail		 Chr6:32486986 Plxna4 within coordinates of
Tssr55475 1128 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232417526
MGI SNP Detail		 Chr6:32487026 Plxna4 within coordinates of
Tssr55475 1088 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36380156
MGI SNP Detail		 Chr6:32487036 Plxna4 within coordinates of
Tssr55475 1078 bp upstream
 SNP C/T T T T T T T T T C T T C T T C C T
rs255316616
MGI SNP Detail		 Chr6:32487083 Plxna4 within coordinates of
Tssr55475 1031 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214874190
MGI SNP Detail		 Chr6:32487193 Plxna4 within coordinates of
Tssr55475 921 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230035862
MGI SNP Detail		 Chr6:32487212 Plxna4 within coordinates of
Tssr55475 902 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250654224
MGI SNP Detail		 Chr6:32487213 Plxna4 within coordinates of
Tssr55475 901 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37206746
MGI SNP Detail		 Chr6:32487215 Plxna4 within coordinates of
Tssr55475 899 bp upstream
 SNP A/G G G G G G G G G A G G A G G A A G
rs236674886
MGI SNP Detail		 Chr6:32487220 Plxna4 within coordinates of
Tssr55475 894 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs258984827
MGI SNP Detail		 Chr6:32487313 Plxna4 within coordinates of
Tssr55475 801 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225674832
MGI SNP Detail		 Chr6:32487372 Plxna4 within coordinates of
Tssr55475 742 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs243663743
MGI SNP Detail		 Chr6:32487422 Plxna4 within coordinates of
Tssr55475 692 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261819502
MGI SNP Detail		 Chr6:32487433 Plxna4 within coordinates of
Tssr55475 681 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs578755108
MGI SNP Detail		 Chr6:32487490 Plxna4 within coordinates of
Tssr55475 624 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs223064058
MGI SNP Detail		 Chr6:32487547 Plxna4 within coordinates of
Tssr55475 567 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C G G C C C G G C C G G C C C C G G C C G C C C G G G C G C C G C G G C
rs235645404
MGI SNP Detail		 Chr6:32487565 Plxna4 within coordinates of
Tssr55475 549 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254434975
MGI SNP Detail		 Chr6:32487586 Plxna4 within coordinates of
Tssr55475 528 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221857269
MGI SNP Detail		 Chr6:32487594 Plxna4 within coordinates of
Tssr55475 520 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241458007
MGI SNP Detail		 Chr6:32487657 Plxna4 within coordinates of
Tssr55475 457 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253654806
MGI SNP Detail		 Chr6:32487729 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 385 bp upstream
 SNP A/G G A
rs263131399
MGI SNP Detail		 Chr6:32487737 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 377 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs233039178
MGI SNP Detail		 Chr6:32487745 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 369 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581869261
MGI SNP Detail		 Chr6:32487750 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 364 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250728593
MGI SNP Detail		 Chr6:32487751 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 363 bp upstream
 SNP A/G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T A T
rs265304282
MGI SNP Detail		 Chr6:32487757 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 357 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T G G T T T G G T T G G G T T T T G G T T G T T T G G G T G T T G G G G T G
rs585647431
MGI SNP Detail		 Chr6:32487759 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 355 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224298170
MGI SNP Detail		 Chr6:32487782 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 332 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36579130
MGI SNP Detail		 Chr6:32487830 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 284 bp upstream
 SNP A/T A A A A A A A A A A A A A T A
rs244405106
MGI SNP Detail		 Chr6:32487979 Plxna4 within coordinates of
Rr628119 within coordinates of
Tssr55475 135 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216859972
MGI SNP Detail		 Chr6:32488088 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55474 within coordinates of
Tssr55475 26 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236637569
MGI SNP Detail		 Chr6:32488140 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 15 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257583717
MGI SNP Detail		 Chr6:32488173 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 48 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217156164
MGI SNP Detail		 Chr6:32488176 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 51 bp downstream
 SNP C/T T C
rs36366985
MGI SNP Detail		 Chr6:32488267 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 142 bp downstream
 SNP A/T T T T T T T T T A T T A T T A A T
rs242862166
MGI SNP Detail		 Chr6:32488293 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 168 bp downstream
 SNP A/G A G
rs258231960
MGI SNP Detail		 Chr6:32488308 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 183 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36527021
MGI SNP Detail		 Chr6:32488311 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 186 bp downstream
 SNP C/T C C C C C C C C T C C T C C T T C
rs229671990
MGI SNP Detail		 Chr6:32488312 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 187 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37948101
MGI SNP Detail		 Chr6:32488326 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628120 within coordinates of
Tssr55475 201 bp downstream
 SNP A/G G G G G G G G G A G G A G G A A G
rs221802857
MGI SNP Detail		 Chr6:32488400 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 275 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241375049
MGI SNP Detail		 Chr6:32488509 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 384 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37156234
MGI SNP Detail		 Chr6:32488566 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 441 bp downstream
 SNP A/T A A A A A A A A T A A T A A T T A
rs224902283
MGI SNP Detail		 Chr6:32488647 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 522 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245877191
MGI SNP Detail		 Chr6:32488671 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 546 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262769527
MGI SNP Detail		 Chr6:32488740 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 615 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37918098
MGI SNP Detail		 Chr6:32488753 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 628 bp downstream
 SNP C/T C C C C C C C C T C C T C C T T C
rs244371904
MGI SNP Detail		 Chr6:32488760 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 635 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242157209
MGI SNP Detail		 Chr6:32488807 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 682 bp downstream
 SNP G/T G T
rs229369098
MGI SNP Detail		 Chr6:32488837 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 712 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580322186
MGI SNP Detail		 Chr6:32488845 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 720 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs37414379
MGI SNP Detail		 Chr6:32488872 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 747 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs37130735
MGI SNP Detail		 Chr6:32488878 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 753 bp downstream
 SNP A/T T T T T T T T T A T T T T T A A T
rs387871358
MGI SNP Detail		 Chr6:32488933 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 808 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G A A G G G A G G G A A G G G G G A G G G A G G G G A A G A G G G G A A G G
rs585686880
MGI SNP Detail		 Chr6:32488939 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 814 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579996843
MGI SNP Detail		 Chr6:32488944 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 819 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583762770
MGI SNP Detail		 Chr6:32488949 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 824 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs586832999
MGI SNP Detail		 Chr6:32488954 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 829 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581196706
MGI SNP Detail		 Chr6:32488959 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 834 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs587015455
MGI SNP Detail		 Chr6:32488977 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 852 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G T T G G G T G G G T T G G G G G T G G G T G G G G T T G T G G G G T T G G
rs218243459
MGI SNP Detail		 Chr6:32489070 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628121 within coordinates of
Tssr55475 945 bp downstream
 SNP C/T T C
rs236475319
MGI SNP Detail		 Chr6:32489100 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628121 within coordinates of
Tssr55475 975 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256684085
MGI SNP Detail		 Chr6:32489180 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628121 within coordinates of
Tssr55475 1055 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212482645
MGI SNP Detail		 Chr6:32489229 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628121 within coordinates of
Tssr55475 1104 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37256408
MGI SNP Detail		 Chr6:32489236 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628121 within coordinates of
Tssr55475 1111 bp downstream
 SNP C/T C C C C C C C C C C C C C T C
rs231071224
MGI SNP Detail		 Chr6:32489241 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Rr628121 within coordinates of
Tssr55475 1116 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs36809263
MGI SNP Detail		 Chr6:32489334 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1209 bp downstream
 SNP A/C C C C C C C C C A C C C C C C
rs248612320
MGI SNP Detail		 Chr6:32489340 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1215 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221777352
MGI SNP Detail		 Chr6:32489385 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1260 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238196417
MGI SNP Detail		 Chr6:32489397 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1272 bp downstream
 SNP C/T C T
rs242782281
MGI SNP Detail		 Chr6:32489457 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1332 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258429183
MGI SNP Detail		 Chr6:32489532 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1407 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs224990160
MGI SNP Detail		 Chr6:32489534 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1409 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs243006597
MGI SNP Detail		 Chr6:32489539 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1414 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs37589894
MGI SNP Detail		 Chr6:32489541 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1416 bp downstream
 SNP C/T T T T T T T T T C T T T T C T
rs38228730
MGI SNP Detail		 Chr6:32489586 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1461 bp downstream
 SNP G/T T T T T T T T T T T G T T G T
rs37587203
MGI SNP Detail		 Chr6:32489743 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1618 bp downstream
 SNP C/T C C C C C C C C C C T C C T C
rs36766007
MGI SNP Detail		 Chr6:32489813 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1688 bp downstream
 SNP C/T T T T T T T T T T T C C T T C T
rs229335022
MGI SNP Detail		 Chr6:32489902 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1777 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs45991285
MGI SNP Detail		 Chr6:32489911 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1786 bp downstream
 SNP G/T G T
rs263725884
MGI SNP Detail		 Chr6:32490051 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1926 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37586547
MGI SNP Detail		 Chr6:32490069 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1944 bp downstream
 SNP C/T T T T T T T T T T T T C C T T T T
rs251753131
MGI SNP Detail		 Chr6:32490108 Plxna4 within coordinates of
Plxna4os1 within coordinates of
Tssr55475 1983 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 94 of 94
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory