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Mouse SNP Summary
Symbol
Name
ID
Tssr56220
transcription start site region 56220
MGI:5983987

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261169961
MGI SNP Detail
Alliance Variant
Chr6:48816608 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1959 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228492518
MGI SNP Detail
Alliance Variant
Chr6:48816638 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1929 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237822333
MGI SNP Detail
Alliance Variant
Chr6:48816666 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1901 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G A G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255787609
MGI SNP Detail
Alliance Variant
Chr6:48816669 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1898 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs230928130
MGI SNP Detail
Alliance Variant
Chr6:48816722 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1845 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T A A T A T T T T A T T T T A T T T T T T T T T T T T T T T T T T T A
rs250320886
MGI SNP Detail
Alliance Variant
Chr6:48816729 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1838 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A T T A T A A A A T A A T A A T A A A A A A A A A A A A A A A T A A A T
rs216787757
MGI SNP Detail
Alliance Variant
Chr6:48816747 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1820 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C T T C T C C C C T C C T C C T C C C C C C C C C C C C C C C T C C C T
rs232723508
MGI SNP Detail
Alliance Variant
Chr6:48816761 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1806 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C T T C T C C C C T C C T C C T C C C C C C C C C C C C C C C C C C C T
rs36421514
MGI SNP Detail
Alliance Variant
Chr6:48816836 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1731 bp upstream
SNP A/G A A A A A A A A A G A A G
rs217499738
MGI SNP Detail
Alliance Variant
Chr6:48816938 Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1629 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234609433
MGI SNP Detail
Alliance Variant
Chr6:48817017 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1550 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs581107180
MGI SNP Detail
Alliance Variant
Chr6:48817030 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1537 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249192860
MGI SNP Detail
Alliance Variant
Chr6:48817050 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1517 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs36760127
MGI SNP Detail
Alliance Variant
Chr6:48817054 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1513 bp upstream
SNP C/T T T T T T T C T T T C T T C T
rs239204037
MGI SNP Detail
Alliance Variant
Chr6:48817110 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1457 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36517873
MGI SNP Detail
Alliance Variant
Chr6:48817118 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1449 bp upstream
SNP C/T T T T T T T C T T T T T T T
rs225358333
MGI SNP Detail
Alliance Variant
Chr6:48817130 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1437 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs37730473
MGI SNP Detail
Alliance Variant
Chr6:48817153 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1414 bp upstream
SNP A/G G G G G G G A G G G G G G G G
rs255280871
MGI SNP Detail
Alliance Variant
Chr6:48817277 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1290 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36439710
MGI SNP Detail
Alliance Variant
Chr6:48817324 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1243 bp upstream
SNP C/G G G G G G G G G G G C G G C G
rs36814581
MGI SNP Detail
Alliance Variant
Chr6:48817379 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1188 bp upstream
SNP A/G A A A A A A G A A A G A A G A
rs264606006
MGI SNP Detail
Alliance Variant
Chr6:48817384 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tmem176b Splice-Site
Tssr56220 1183 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T G T T T G T T T T G T G T T G G T T T T T T G T T T T T T T T T T T G
rs230669711
MGI SNP Detail
Alliance Variant
Chr6:48817437 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1130 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245755876
MGI SNP Detail
Alliance Variant
Chr6:48817495 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1072 bp upstream
Tssr60806 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263397266
MGI SNP Detail
Alliance Variant
Chr6:48817534 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 1033 bp upstream
Tssr60807 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs226566772
MGI SNP Detail
Alliance Variant
Chr6:48817590 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 977 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G
rs247147795
MGI SNP Detail
Alliance Variant
Chr6:48817603 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 964 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A G G A A A A G A A A A A A G A A A A A A A G A A A A
rs217565843
MGI SNP Detail
Alliance Variant
Chr6:48817610 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 957 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228843387
MGI SNP Detail
Alliance Variant
Chr6:48817611 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 956 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36535134
MGI SNP Detail
Alliance Variant
Chr6:48817672 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 895 bp upstream
SNP A/G G G G G G G A G G G A G G A G
rs212643102
MGI SNP Detail
Alliance Variant
Chr6:48817737 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 830 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237170831
MGI SNP Detail
Alliance Variant
Chr6:48817800 Rr629775 within coordinates of
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 767 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255519292
MGI SNP Detail
Alliance Variant
Chr6:48817887 Rr629775 within coordinates of
Tmem176a mRNA-UTR
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 680 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216759716
MGI SNP Detail
Alliance Variant
Chr6:48817911 Rr629776 within coordinates of
Tmem176a mRNA-UTR
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 656 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233967926
MGI SNP Detail
Alliance Variant
Chr6:48817918 Rr629776 within coordinates of
Tmem176a mRNA-UTR
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 649 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255363654
MGI SNP Detail
Alliance Variant
Chr6:48817937 Rr629776 within coordinates of
Tmem176a mRNA-UTR
Tmem176b Intron
Tmem176b mRNA-UTR
Tmem176b Noncoding-Transcript-Variant
Tssr56220 630 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs222590229
MGI SNP Detail
Alliance Variant
Chr6:48818130 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 437 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230577242
MGI SNP Detail
Alliance Variant
Chr6:48818131 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 436 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G T T G T T G G G T T G G G G T T G G G G G G T G G G G G G G T G G G T
rs255370809
MGI SNP Detail
Alliance Variant
Chr6:48818132 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 435 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223031700
MGI SNP Detail
Alliance Variant
Chr6:48818155 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 412 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs242840981
MGI SNP Detail
Alliance Variant
Chr6:48818175 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 392 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265647108
MGI SNP Detail
Alliance Variant
Chr6:48818194 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 373 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220574484
MGI SNP Detail
Alliance Variant
Chr6:48818232 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 335 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241214292
MGI SNP Detail
Alliance Variant
Chr6:48818258 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b Intron
Tmem176b mRNA-UTR
Tssr56220 309 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs258621941
MGI SNP Detail
Alliance Variant
Chr6:48818336 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b mRNA-UTR
Tssr56220 231 bp upstream
Tssr60816 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs228833153
MGI SNP Detail
Alliance Variant
Chr6:48818378 Rr629776 within coordinates of
Tmem176a Intron
Tmem176b mRNA-UTR
Tssr56220 189 bp upstream
Tssr60819 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254762770
MGI SNP Detail
Alliance Variant
Chr6:48818570 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T C C T C C T T T C C T C T C C T T T T T T C T T T T T T C T T T C
rs261666485
MGI SNP Detail
Alliance Variant
Chr6:48818579 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 1 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs231539549
MGI SNP Detail
Alliance Variant
Chr6:48818616 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 38 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250995308
MGI SNP Detail
Alliance Variant
Chr6:48818707 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 129 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216049982
MGI SNP Detail
Alliance Variant
Chr6:48818728 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 150 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs234155111
MGI SNP Detail
Alliance Variant
Chr6:48818773 Tmem176a Intron
Tssr56220 195 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A G A A A A G A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248839926
MGI SNP Detail
Alliance Variant
Chr6:48818816 Tmem176a Intron
Tssr56220 238 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs216787075
MGI SNP Detail
Alliance Variant
Chr6:48818871 Tmem176a Intron
Tssr56220 293 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230553641
MGI SNP Detail
Alliance Variant
Chr6:48818897 Tmem176a Intron
Tssr56220 319 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260902578
MGI SNP Detail
Alliance Variant
Chr6:48818975 Tmem176a Intron
Tssr56220 397 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs223404496
MGI SNP Detail
Alliance Variant
Chr6:48819035 Tmem176a Intron
Tssr56220 457 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs237870645
MGI SNP Detail
Alliance Variant
Chr6:48819051 Tmem176a Intron
Tssr56220 473 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259327436
MGI SNP Detail
Alliance Variant
Chr6:48819082 Tmem176a Intron
Tssr56220 504 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220515830
MGI SNP Detail
Alliance Variant
Chr6:48819125 Tmem176a Intron
Tssr56220 547 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241380789
MGI SNP Detail
Alliance Variant
Chr6:48819140 Tmem176a mRNA-UTR
Tmem176a Splice-Site
Tssr56220 562 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G G A
rs258608987
MGI SNP Detail
Alliance Variant
Chr6:48819165 Tmem176a Coding-NonSynonymous
Tssr56220 587 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218403256
MGI SNP Detail
Alliance Variant
Chr6:48819168 Tmem176a Coding-NonSynonymous
Tssr56220 590 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G A G G A G G G G G G G G G G G G G G G A G G G A
rs242595758
MGI SNP Detail
Alliance Variant
Chr6:48819288 Tmem176a Coding-NonSynonymous
Tssr56220 710 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264741544
MGI SNP Detail
Alliance Variant
Chr6:48819382 Tmem176a Intron
Tssr56220 804 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260200742
MGI SNP Detail
Alliance Variant
Chr6:48819422 Tmem176a Intron
Tssr56220 844 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T G G T T T G G T G T T T G T T T T T T G T T T T T T T G T T T T
rs227516052
MGI SNP Detail
Alliance Variant
Chr6:48819473 Tmem176a Intron
Tssr56220 895 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C G C C C G C C C C C C G C C C C C C C C C C C C
rs249015883
MGI SNP Detail
Alliance Variant
Chr6:48819552 Tmem176a Coding-Synonymous
Tssr56220 974 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs216740314
MGI SNP Detail
Alliance Variant
Chr6:48819581 Tmem176a Coding-NonSynonymous
Tssr56220 1003 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs229285783
MGI SNP Detail
Alliance Variant
Chr6:48819584 Tmem176a Coding-NonSynonymous
Tssr56220 1006 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249193562
MGI SNP Detail
Alliance Variant
Chr6:48819686 Tmem176a Intron
Tssr56220 1108 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G T G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G
rs215059153
MGI SNP Detail
Alliance Variant
Chr6:48819725 Tmem176a Intron
Tssr56220 1147 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs236199496
MGI SNP Detail
Alliance Variant
Chr6:48819726 Tmem176a Intron
Tssr56220 1148 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C T C C C T
rs263270480
MGI SNP Detail
Alliance Variant
Chr6:48819793 Tmem176a Intron
Tssr56220 1215 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215113653
MGI SNP Detail
Alliance Variant
Chr6:48819938 Tmem176a Intron
Tssr56220 1360 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234930451
MGI SNP Detail
Alliance Variant
Chr6:48819947 Tmem176a Intron
Tssr56220 1369 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252485821
MGI SNP Detail
Alliance Variant
Chr6:48819956 Tmem176a Intron
Tssr56220 1378 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T C C T C C T T T C C T C T T C C T T T T T T C T T T T T T T C T T T C
rs218475735
MGI SNP Detail
Alliance Variant
Chr6:48819957 Tmem176a Intron
Tssr56220 1379 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243581182
MGI SNP Detail
Alliance Variant
Chr6:48820045 Tmem176a Intron
Tssr56220 1467 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257542815
MGI SNP Detail
Alliance Variant
Chr6:48820046 Tmem176a Intron
Tssr56220 1468 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223553010
MGI SNP Detail
Alliance Variant
Chr6:48820256 Tmem176a Intron
Tssr56220 1678 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs243665702
MGI SNP Detail
Alliance Variant
Chr6:48820267 Tmem176a Intron
Tssr56220 1689 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C T C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs260189922
MGI SNP Detail
Alliance Variant
Chr6:48820285 Tmem176a Coding-Synonymous
Tmem176a Intron
Tmem176a Splice-Site
Tssr56220 1707 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227674567
MGI SNP Detail
Alliance Variant
Chr6:48820323 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 1745 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs243039574
MGI SNP Detail
Alliance Variant
Chr6:48820324 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 1746 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs260755728
MGI SNP Detail
Alliance Variant
Chr6:48820351 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 1773 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229021547
MGI SNP Detail
Alliance Variant
Chr6:48820486 Tmem176a Intron
Tmem176a mRNA-UTR
Tssr56220 1908 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 87 of 87

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/29/2025
MGI 6.24
The Jackson Laboratory