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Mouse SNP Summary
Symbol
Name
ID 		Tssr56957
transcription start site region 56957
MGI:5984724

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Showing SNP(s) 1 - 77 of 77

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36292176
MGI SNP Detail		 Chr6:70701433 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1981 bp upstream
 SNP A/G G G G G G G G G G G G G G A
rs230814695
MGI SNP Detail		 Chr6:70701455 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1959 bp upstream
 SNP A/G A G
rs36938782
MGI SNP Detail		 Chr6:70701529 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1885 bp upstream
 SNP C/T T T T T T T T T T T T T C T
rs251946240
MGI SNP Detail		 Chr6:70701533 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1881 bp upstream
 SNP A/G A G
rs37190283
MGI SNP Detail		 Chr6:70701658 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1756 bp upstream
 SNP C/T C C T C C C T C T T T C T C
rs38472216
MGI SNP Detail		 Chr6:70701682 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1732 bp upstream
 SNP A/T T T A T T T A T A A A T A T
rs36417716
MGI SNP Detail		 Chr6:70701741 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1673 bp upstream
 SNP G/T G G G G G G G T T T G T G G
rs247047290
MGI SNP Detail		 Chr6:70701785 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1629 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs254005226
MGI SNP Detail		 Chr6:70701786 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1628 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs37153725
MGI SNP Detail		 Chr6:70701805 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1609 bp upstream
 SNP C/T T T C T T T C T C C C C T C T T
rs36666673
MGI SNP Detail		 Chr6:70701831 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1583 bp upstream
 SNP A/C A A A A A A A A A C C A A C A A
rs38163115
MGI SNP Detail		 Chr6:70701866 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1548 bp upstream
 SNP A/G G G G G G G A G G G G G G G
rs216624760
MGI SNP Detail		 Chr6:70701930 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1484 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C T C C T C C C C C T C C C C T C T C C C C
rs212369444
MGI SNP Detail		 Chr6:70701945 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1469 bp upstream
 SNP A/G G A
rs230968444
MGI SNP Detail		 Chr6:70701958 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1456 bp upstream
 SNP A/C A C
rs251410504
MGI SNP Detail		 Chr6:70702062 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1352 bp upstream
 SNP G/T T G
rs236008603
MGI SNP Detail		 Chr6:70702095 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 1319 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251776557
MGI SNP Detail		 Chr6:70702149 Igk within coordinates of
Rr150202 within coordinates of
Rr399684 within coordinates of
Tssr56957 1265 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs36840215
MGI SNP Detail		 Chr6:70702238 Igk within coordinates of
Rr150202 within coordinates of
Rr399684 within coordinates of
Tssr56957 1176 bp upstream
 SNP C/T C C T C C C C C T C T C C C
rs214938708
MGI SNP Detail		 Chr6:70702315 Igk within coordinates of
Rr150202 within coordinates of
Rr399684 within coordinates of
Tssr56957 1099 bp upstream
 SNP A/T A T
rs36553274
MGI SNP Detail		 Chr6:70702319 Igk within coordinates of
Rr150202 within coordinates of
Rr399684 within coordinates of
Tssr56957 1095 bp upstream
 SNP G/T T T T T T T T T T G G T T T T
rs259544497
MGI SNP Detail		 Chr6:70702352 Igk within coordinates of
Rr150202 within coordinates of
Rr399684 within coordinates of
Tssr56957 1062 bp upstream
 SNP A/T A T
rs248384251
MGI SNP Detail		 Chr6:70702425 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 989 bp upstream
 SNP C/T C C C C T C C C C C C C C C C C C T C C C T C C C C T T C C C C C C C C C T C C T C C C C C C C
rs259766884
MGI SNP Detail		 Chr6:70702472 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 942 bp upstream
 SNP A/G G G G A G G G G G G G G G G G G G A G G G G G G G G A A G G G A G G G G A G G A G G G G G G G G
rs226237360
MGI SNP Detail		 Chr6:70702572 Igk within coordinates of
Rr150202 within coordinates of
Rr399685 within coordinates of
Tssr56957 842 bp upstream
 SNP A/T A T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36300833
MGI SNP Detail		 Chr6:70702609 Igk within coordinates of
Rr150202 within coordinates of
Rr399685 within coordinates of
Tssr56957 805 bp upstream
 SNP C/T T T C T T T C T C C C C T C T T
rs36842487
MGI SNP Detail		 Chr6:70702854 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 560 bp upstream
 SNP A/G G G G G G G G G G G G G A G
rs37064876
MGI SNP Detail		 Chr6:70702870 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 544 bp upstream
 SNP A/G A A A A A A A A G G A A A A A
rs40248943
MGI SNP Detail		 Chr6:70702889 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 525 bp upstream
 SNP C/G G G G G G G G G G C G G G G
rs36682271
MGI SNP Detail		 Chr6:70702906 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 508 bp upstream
 SNP A/G A A G A A A G A G G G G A G A A
rs236551322
MGI SNP Detail		 Chr6:70702942 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 472 bp upstream
 SNP A/C A C
rs37108627
MGI SNP Detail		 Chr6:70702969 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 445 bp upstream
 SNP A/G G G G G G G G G G A G G G G
rs255177902
MGI SNP Detail		 Chr6:70702990 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 424 bp upstream
 SNP C/G G C
rs223122056
MGI SNP Detail		 Chr6:70703003 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 411 bp upstream
 SNP C/T T C
rs36284899
MGI SNP Detail		 Chr6:70703112 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 302 bp upstream
 SNP A/G A A G A A A G A G G G G A G A A
rs263411262
MGI SNP Detail		 Chr6:70703185 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 229 bp upstream
 SNP A/T T A
rs233649273
MGI SNP Detail		 Chr6:70703264 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 150 bp upstream
 SNP C/T C T
rs38238172
MGI SNP Detail		 Chr6:70703294 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 120 bp upstream
 SNP C/T C C C C C C C C C T C C C C
rs39292263
MGI SNP Detail		 Chr6:70703334 Igk within coordinates of
Rr150202 within coordinates of
Tssr56957 80 bp upstream
 SNP A/C A A C A A A C A C C C C A C A A
rs256367903
MGI SNP Detail		 Chr6:70703521 Gm68839 within coordinates of
Igk within coordinates of
Igkc within coordinates of
Rr150202 within coordinates of
Rr399686 within coordinates of
Tssr56957 65 bp downstream
Tssr56961 within coordinates of
 SNP A/G G A
rs225277833
MGI SNP Detail		 Chr6:70703570 Gm68839 within coordinates of
Igk within coordinates of
Igkc within coordinates of
Rr150202 within coordinates of
Rr399686 within coordinates of
Tssr56957 114 bp downstream
 SNP C/T T C
rs218663769
MGI SNP Detail		 Chr6:70703616 Gm68839 within coordinates of
Igk within coordinates of
Igkc within coordinates of
Rr150202 within coordinates of
Rr399686 within coordinates of
Tssr56957 160 bp downstream
 SNP A/G A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs245256150
MGI SNP Detail		 Chr6:70703636 Gm68839 within coordinates of
Igk within coordinates of
Igkc within coordinates of
Rr150202 within coordinates of
Rr399686 within coordinates of
Tssr56957 180 bp downstream
Tssr61322 within coordinates of
 SNP A/G A G
rs36649590
MGI SNP Detail		 Chr6:70703711 Gm68839 within coordinates of
Igk within coordinates of
Igkc within coordinates of
Rr150202 within coordinates of
Rr399686 within coordinates of
Tssr56957 255 bp downstream
Tssr61323 within coordinates of
 SNP C/T T T C T T T C T C C C C T C T T
rs238065712
MGI SNP Detail		 Chr6:70703744 Gm68839 within coordinates of
Rr150202 within coordinates of
Rr399686 within coordinates of
Tssr56957 288 bp downstream
Tssr56972 within coordinates of
Tssr61324 within coordinates of
 SNP A/C C A
rs38100853
MGI SNP Detail		 Chr6:70703759 Gm68839 within coordinates of
Rr150202 within coordinates of
Rr399686 within coordinates of
Tssr56957 303 bp downstream
Tssr56972 within coordinates of
Tssr61324 within coordinates of
 SNP C/T C C T C C C C C T C T C T C
rs248343231
MGI SNP Detail		 Chr6:70703873 Gm68839 within coordinates of
Rr150202 within coordinates of
Tssr56957 417 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C
rs258435579
MGI SNP Detail		 Chr6:70703888 Gm68839 within coordinates of
Rr150202 within coordinates of
Tssr56957 432 bp downstream
 SNP A/C A C
rs39108090
MGI SNP Detail		 Chr6:70704051 Rr150202 within coordinates of
Tssr56957 595 bp downstream
 SNP C/T C C C C C C T C C C C C C C
rs218169767
MGI SNP Detail		 Chr6:70704103 Rr150202 within coordinates of
Tssr56957 647 bp downstream
 SNP G/T G T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37431328
MGI SNP Detail		 Chr6:70704284 Rr150202 within coordinates of
Tssr56957 828 bp downstream
 SNP A/G G G G G G A G A A A A G A G G
rs36824023
MGI SNP Detail		 Chr6:70704293 Rr150202 within coordinates of
Tssr56957 837 bp downstream
 SNP G/T T T G T T T G T G G T T T
rs265695981
MGI SNP Detail		 Chr6:70704306 Rr150202 within coordinates of
Tssr56957 850 bp downstream
 SNP A/C A A A A C A A A A A A A A A A A A A C A A A A A A A A C C A A A A A C A A A A C A A C C A A A A A A A A A
rs36320280
MGI SNP Detail		 Chr6:70704315 Rr150202 within coordinates of
Tssr56957 859 bp downstream
 SNP A/G A A G A A A G A G G A G A A
rs37805778
MGI SNP Detail		 Chr6:70704382 Rr150202 within coordinates of
Tssr56957 926 bp downstream
 SNP A/G G G G G G G A G G G G G G G
rs36514806
MGI SNP Detail		 Chr6:70704432 Rr150202 within coordinates of
Tssr56957 976 bp downstream
 SNP A/C A A C A A A A A C A C A A A
rs36355833
MGI SNP Detail		 Chr6:70704482 Rr150202 within coordinates of
Tssr56957 1026 bp downstream
 SNP A/G G G G G G G G G G A A G G G G G
rs247783049
MGI SNP Detail		 Chr6:70704545 Rr150202 within coordinates of
Tssr56957 1089 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36419429
MGI SNP Detail		 Chr6:70704566 Rr150202 within coordinates of
Tssr56957 1110 bp downstream
 SNP A/G/T G G A G G G G G A T G A G G G G
rs222942466
MGI SNP Detail		 Chr6:70704746 Rr150202 within coordinates of
Tssr56957 1290 bp downstream
 SNP G/T T G
rs253538524
MGI SNP Detail		 Chr6:70704805 Rr150202 within coordinates of
Tssr56957 1349 bp downstream
 SNP A/T A A A A T A A A A A A A A A A A A A T A A A A A A A A T T A A A A A T A A A A T A A T T A A A A A A A A A
rs36609330
MGI SNP Detail		 Chr6:70704846 Rr150202 within coordinates of
Tssr56957 1390 bp downstream
 SNP A/G A A G A A A A G G G A G A
rs244941127
MGI SNP Detail		 Chr6:70704853 Rr150202 within coordinates of
Tssr56957 1397 bp downstream
 SNP A/G A G
rs265650225
MGI SNP Detail		 Chr6:70704855 Rr150202 within coordinates of
Tssr56957 1399 bp downstream
 SNP C/T T C
rs225480649
MGI SNP Detail		 Chr6:70704872 Rr150202 within coordinates of
Tssr56957 1416 bp downstream
 SNP C/T T C
rs36627278
MGI SNP Detail		 Chr6:70704908 Rr150202 within coordinates of
Tssr56957 1452 bp downstream
 SNP C/T T T T T T T T T T C T T T T
rs36802899
MGI SNP Detail		 Chr6:70704930 Rr150202 within coordinates of
Tssr56957 1474 bp downstream
 SNP A/G A A G A A A A A G A G A G A
rs36346429
MGI SNP Detail		 Chr6:70704941 Rr150202 within coordinates of
Tssr56957 1485 bp downstream
 SNP A/T A A A A A A T T T A T A
rs37148985
MGI SNP Detail		 Chr6:70705033 Rr150202 within coordinates of
Tssr56957 1577 bp downstream
 SNP C/G G G G G G G C G G G G G G G
rs38762489
MGI SNP Detail		 Chr6:70705068 Rr150202 within coordinates of
Tssr56957 1612 bp downstream
 SNP A/G A A A A A A G A A G A A A A
rs37072556
MGI SNP Detail		 Chr6:70705081 Rr150202 within coordinates of
Tssr56957 1625 bp downstream
 SNP C/T T T C T T T T T C C T C T C T T
rs222131319
MGI SNP Detail		 Chr6:70705149 Rr150202 within coordinates of
Tssr56957 1693 bp downstream
 SNP A/G G G G G A G G G G G G G G G G G G G A G G G A G G G G A A G G G G G A G G G G A A G A A G G G G G G G G G
rs256419837
MGI SNP Detail		 Chr6:70705277 Rr150202 within coordinates of
Tssr56957 1821 bp downstream
 SNP C/T T C
rs38257267
MGI SNP Detail		 Chr6:70705342 Rr150202 within coordinates of
Tssr56957 1886 bp downstream
 SNP A/G A A G A A A G A G G G G A G A A
rs38110272
MGI SNP Detail		 Chr6:70705371 Rr150202 within coordinates of
Tssr56957 1915 bp downstream
 SNP A/G G G A G G G A G A A A A G A G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241800817
MGI SNP Detail		 Chr6:70705445 Rr150202 within coordinates of
Tssr56957 1989 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs266065416
MGI SNP Detail		 Chr6:70705449 Rr150202 within coordinates of
Tssr56957 1993 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
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Showing SNP(s) 1 - 77 of 77
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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