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Mouse SNP Summary
Symbol
Name
ID 		Tssr57078
transcription start site region 57078
MGI:5984845

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Showing SNP(s) 1 - 30 of 30

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
SM/J
WSB/EiJ
rs30267771
MGI SNP Detail		 Chr6:72279486 Rr632125 within coordinates of
Tssr57078 1801 bp upstream
 SNP A/G G G A
rs30220273
MGI SNP Detail		 Chr6:72279549 Rr632125 within coordinates of
Tssr57078 1738 bp upstream
 SNP A/G G G A A A
rs30738416
MGI SNP Detail		 Chr6:72279685 Rr632125 within coordinates of
Tssr57078 1602 bp upstream
 SNP C/T C C C C C C C C C C T C C C
rs30738418
MGI SNP Detail		 Chr6:72279858 Rr632125 within coordinates of
Tssr57078 1429 bp upstream
 SNP C/T C C T C C C C C C T C C C
rs29830317
MGI SNP Detail		 Chr6:72280125 Tssr57078 1162 bp upstream
 SNP C/T C C T T T
rs30738420
MGI SNP Detail		 Chr6:72280128 Tssr57078 1159 bp upstream
 SNP A/C C C C C C C C C C C A
rs30738422
MGI SNP Detail		 Chr6:72280130 Tssr57078 1157 bp upstream
 SNP C/G G G G G G C G G G G G
rs30369490
MGI SNP Detail		 Chr6:72280228 Tssr57078 1059 bp upstream
 SNP C/T T T T C C C
rs30409600
MGI SNP Detail		 Chr6:72280231 Tssr57078 1056 bp upstream
 SNP A/G G G G A A A
rs30031739
MGI SNP Detail		 Chr6:72280305 Tssr57078 982 bp upstream
 SNP C/T C T T C
rs213897807
MGI SNP Detail		 Chr6:72280493 Tssr57078 794 bp upstream
 SNP A A A
rs30739294
MGI SNP Detail		 Chr6:72280641 Tssr57078 646 bp upstream
 SNP C/T C C C C C T C C T T C C
rs30739296
MGI SNP Detail		 Chr6:72280642 Tssr57078 645 bp upstream
 SNP G/T G G G G G G G G G T G
rs30739298
MGI SNP Detail		 Chr6:72280898 Tssr57078 389 bp upstream
 SNP C/G C C C C C C G C C C C C
rs30739300
MGI SNP Detail		 Chr6:72280904 Tssr57078 383 bp upstream
 SNP A/T T T T T T T T T T A T
rs30739302
MGI SNP Detail		 Chr6:72281030 Tssr57078 257 bp upstream
 SNP C/T T T C T T T C T T C T T
rs30740324
MGI SNP Detail		 Chr6:72281048 Tssr57078 239 bp upstream
 SNP A/G A A A A A G A A G A
rs30740326
MGI SNP Detail		 Chr6:72281065 Tssr57078 222 bp upstream
 SNP A/C C C A C C C C C C A C A C
rs30733084
MGI SNP Detail		 Chr6:72281236 Rr632126 within coordinates of
Tssr57078 51 bp upstream
 SNP C/T C C C C C C T C C C C C C
rs30733086
MGI SNP Detail		 Chr6:72281433 Rr632126 within coordinates of
Tssr57078 135 bp downstream
 SNP A/G G G G G G G G G G G A G G G
rs30733088
MGI SNP Detail		 Chr6:72281484 Rr632126 within coordinates of
Tssr57078 186 bp downstream
 SNP C/T C C C C T C C T C C
rs48460366
MGI SNP Detail
Alliance Variant		 Chr6:72281771 Sftpb Intron
Tssr57078 473 bp downstream
 SNP C C C C
rs30733090
MGI SNP Detail
Alliance Variant		 Chr6:72281931 Sftpb Intron
Tssr57078 633 bp downstream
 SNP A/G G G A G G G G G G A A A G
rs30733092
MGI SNP Detail
Alliance Variant		 Chr6:72282049 Sftpb Coding-Synonymous
Tssr57078 751 bp downstream
 SNP A/G G G G G G G G G A G
rs30426665
MGI SNP Detail
Alliance Variant		 Chr6:72282115 Sftpb Intron
Tssr57078 817 bp downstream
 SNP C/T T T T C T T C C T C C C C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
PWD/PhJ
SM/J
WSB/EiJ
rs30734055
MGI SNP Detail
Alliance Variant		 Chr6:72282178 Sftpb Intron
Tssr57078 880 bp downstream
 SNP A/T T T T T T T A T T T A T T T
rs30734057
MGI SNP Detail
Alliance Variant		 Chr6:72282707 Sftpb Intron
Tssr57078 1409 bp downstream
 SNP A/C A A C A A A C A A C A
rs30734059
MGI SNP Detail
Alliance Variant		 Chr6:72282772 Sftpb Intron
Tssr57078 1474 bp downstream
 SNP C/T C C C C C C T C C C C C C C
rs52137143
MGI SNP Detail
Alliance Variant		 Chr6:72282965 Sftpb Intron
Tssr57078 1667 bp downstream
Tssr57088 within coordinates of
 SNP C C C
rs52258687
MGI SNP Detail
Alliance Variant		 Chr6:72283051 Sftpb Intron
Tssr57078 1753 bp downstream
 SNP C/T C T
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Showing SNP(s) 1 - 30 of 30
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/29/2025
MGI 6.24 		The Jackson Laboratory