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Mouse SNP Summary
Symbol
Name
ID
Tssr57770
transcription start site region 57770
MGI:5985537

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Showing SNP(s) 1 - 58 of 58

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37490300
MGI SNP Detail
Chr6:91734339 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 1581 bp upstream
SNP A/G G G G G G G A G G G G G G G G
rs211895623
MGI SNP Detail
Chr6:91734394 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 1526 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236185221
MGI SNP Detail
Chr6:91734477 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 1443 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254162313
MGI SNP Detail
Chr6:91734680 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 1240 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A C C A A A A C A A A A C A A A A A A C A A A A C A A C A A A A
rs215757921
MGI SNP Detail
Chr6:91734681 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 1239 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs233770369
MGI SNP Detail
Chr6:91734725 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 1195 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251980590
MGI SNP Detail
Chr6:91734782 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 1138 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs583407898
MGI SNP Detail
Chr6:91734986 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 934 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222592571
MGI SNP Detail
Chr6:91735008 Rr141761 within coordinates of
Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 912 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs245107986
MGI SNP Detail
Chr6:91735010 Rr141761 within coordinates of
Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 910 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255596112
MGI SNP Detail
Chr6:91735047 Rr141761 within coordinates of
Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 873 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs227347795
MGI SNP Detail
Chr6:91735064 Rr141761 within coordinates of
Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57757 within coordinates of
Tssr57770 856 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240971638
MGI SNP Detail
Chr6:91735065 Rr141761 within coordinates of
Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57757 within coordinates of
Tssr57770 855 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258304317
MGI SNP Detail
Chr6:91735259 Rr141761 within coordinates of
Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 661 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238710702
MGI SNP Detail
Chr6:91735466 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57770 454 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs37545766
MGI SNP Detail
Chr6:91735487 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57764 within coordinates of
Tssr57770 433 bp upstream
SNP A/G A A A A A A G A A A G A A A
rs229350583
MGI SNP Detail
Chr6:91735521 Rr379752 within coordinates of
Slc6a6 within coordinates of
Tssr57765 within coordinates of
Tssr57770 399 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253551086
MGI SNP Detail
Chr6:91736066 Rr379752 within coordinates of
Tssr57770 126 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs211717789
MGI SNP Detail
Chr6:91736072 Rr379752 within coordinates of
Tssr57770 132 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228952665
MGI SNP Detail
Chr6:91736326 Tssr57770 386 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247748843
MGI SNP Detail
Chr6:91736361 Tssr57770 421 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215696331
MGI SNP Detail
Chr6:91736417 Tssr57770 477 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233755347
MGI SNP Detail
Chr6:91736427 Tssr57770 487 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257779960
MGI SNP Detail
Chr6:91736431 Tssr57770 491 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs214151634
MGI SNP Detail
Chr6:91736449 Tssr57770 509 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235454995
MGI SNP Detail
Chr6:91736543 Tssr57770 603 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38422809
MGI SNP Detail
Chr6:91736583 Tssr57770 643 bp downstream
SNP A/G G G G G G G G G G G A G G G G
rs36432218
MGI SNP Detail
Chr6:91736641 Tssr57770 701 bp downstream
SNP C/T T T T T T T T T T T C T T C T
rs222729355
MGI SNP Detail
Chr6:91736686 Tssr57770 746 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240911997
MGI SNP Detail
Chr6:91736788 Tssr57770 848 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs252100680
MGI SNP Detail
Chr6:91736855 Tssr57770 915 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs220952063
MGI SNP Detail
Chr6:91736884 Tssr57770 944 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C C T C C C C C C C
rs238642649
MGI SNP Detail
Chr6:91736894 Tssr57770 954 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587148226
MGI SNP Detail
Chr6:91736926 Tssr57770 986 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs262528341
MGI SNP Detail
Chr6:91736943 Tssr57770 1003 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229601712
MGI SNP Detail
Chr6:91736972 Tssr57770 1032 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs241619942
MGI SNP Detail
Chr6:91736983 Tssr57770 1043 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs266245950
MGI SNP Detail
Chr6:91737010 Tssr57770 1070 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36474498
MGI SNP Detail
Chr6:91737118 Tssr57770 1178 bp downstream
SNP A/C A A A A A A C A A A C A A A
rs247738553
MGI SNP Detail
Chr6:91737208 Tssr57770 1268 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T A A T T T T A T T T T T A T T T T T T A T T T T A T T T T T T T
rs583329405
MGI SNP Detail
Chr6:91737256 Tssr57770 1316 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A A A G A A A A A G A A A A A A G A A A A G A A G A A A A
rs256099792
MGI SNP Detail
Chr6:91737330 Tssr57770 1390 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213582936
MGI SNP Detail
Chr6:91737336 Tssr57770 1396 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237126693
MGI SNP Detail
Chr6:91737416 Tssr57770 1476 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A A A G A A A A A G A A A A A A G A A A A G A A A A A A A
rs249090192
MGI SNP Detail
Chr6:91737445 Tssr57770 1505 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217334158
MGI SNP Detail
Chr6:91737502 Tssr57770 1562 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T T C C C C T C C C C C T C C C C C C T C C C C T C C C C C C C
rs234391018
MGI SNP Detail
Chr6:91737513 Tssr57770 1573 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs37823454
MGI SNP Detail
Chr6:91737533 Tssr57770 1593 bp downstream
SNP C/T C C C C C C C C C C T C C C
rs220897347
MGI SNP Detail
Chr6:91737606 Tssr57770 1666 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs237146513
MGI SNP Detail
Chr6:91737647 Tssr57770 1707 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C G G C C C C G C C C C C G C C C C C C G C C C C G C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs262116389
MGI SNP Detail
Chr6:91737678 Tssr57770 1738 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221913126
MGI SNP Detail
Chr6:91737784 Tssr57770 1844 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244370511
MGI SNP Detail
Chr6:91737822 Tssr57770 1882 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261556850
MGI SNP Detail
Chr6:91737868 Tssr57770 1928 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223104490
MGI SNP Detail
Chr6:91737872 Tssr57770 1932 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241685615
MGI SNP Detail
Chr6:91737889 Tssr57770 1949 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259616445
MGI SNP Detail
Chr6:91737891 Tssr57770 1951 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227062249
MGI SNP Detail
Chr6:91737899 Tssr57770 1959 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
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Showing SNP(s) 1 - 58 of 58

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory