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Mouse SNP Summary
Symbol
Name
ID 		Tssr57967
transcription start site region 57967
MGI:5985734

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259188060
MGI SNP Detail		 Chr6:99164058 Foxp1 within coordinates of
Tssr57967 1985 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263936867
MGI SNP Detail		 Chr6:99164381 Foxp1 within coordinates of
Tssr57967 1662 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232831643
MGI SNP Detail		 Chr6:99164445 Foxp1 within coordinates of
Tssr57967 1598 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs252030137
MGI SNP Detail		 Chr6:99164478 Foxp1 within coordinates of
Tssr57967 1565 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214160902
MGI SNP Detail		 Chr6:99164573 Foxp1 within coordinates of
Tssr57967 1470 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231167311
MGI SNP Detail		 Chr6:99164690 Foxp1 within coordinates of
Tssr57967 1353 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242760058
MGI SNP Detail		 Chr6:99164707 Foxp1 within coordinates of
Tssr57967 1336 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs213262508
MGI SNP Detail		 Chr6:99164708 Foxp1 within coordinates of
Tssr57967 1335 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs37216663
MGI SNP Detail		 Chr6:99164720 Foxp1 within coordinates of
Tssr57967 1323 bp upstream
 SNP A/T A A A A A A T A A A T A A T T
rs264381851
MGI SNP Detail		 Chr6:99164793 Foxp1 within coordinates of
Tssr57967 1250 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs226044561
MGI SNP Detail		 Chr6:99164796 Foxp1 within coordinates of
Tssr57967 1247 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A
rs241411544
MGI SNP Detail		 Chr6:99164813 Foxp1 within coordinates of
Tssr57967 1230 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs253064648
MGI SNP Detail		 Chr6:99164872 Foxp1 within coordinates of
Tssr57967 1171 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs220438775
MGI SNP Detail		 Chr6:99164875 Foxp1 within coordinates of
Tssr57967 1168 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs239018279
MGI SNP Detail		 Chr6:99164935 Foxp1 within coordinates of
Tssr57967 1108 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37275646
MGI SNP Detail		 Chr6:99164961 Foxp1 within coordinates of
Tssr57967 1082 bp upstream
 SNP C/G G G G G G C G G C G
rs585777678
MGI SNP Detail		 Chr6:99165005 Foxp1 within coordinates of
Tssr57967 1038 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220090750
MGI SNP Detail		 Chr6:99165038 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 1005 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248271800
MGI SNP Detail		 Chr6:99165039 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 1004 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265896795
MGI SNP Detail		 Chr6:99165047 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 996 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581003373
MGI SNP Detail		 Chr6:99165067 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 976 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs232283627
MGI SNP Detail		 Chr6:99165116 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 927 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239087360
MGI SNP Detail		 Chr6:99165148 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 895 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs256101035
MGI SNP Detail		 Chr6:99165241 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 802 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C T C
rs224989300
MGI SNP Detail		 Chr6:99165247 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 796 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs38120449
MGI SNP Detail		 Chr6:99165339 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 704 bp upstream
 SNP C/G G G G G C G G C G
rs211712230
MGI SNP Detail		 Chr6:99165375 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 668 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs228765441
MGI SNP Detail		 Chr6:99165392 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 651 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255107907
MGI SNP Detail		 Chr6:99165431 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 612 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs218556365
MGI SNP Detail		 Chr6:99165457 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 586 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs239008152
MGI SNP Detail		 Chr6:99165487 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 556 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs253125253
MGI SNP Detail		 Chr6:99165540 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 503 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214566262
MGI SNP Detail		 Chr6:99165556 Foxp1 within coordinates of
Rr399787 within coordinates of
Rr635365 within coordinates of
Tssr57967 487 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231916050
MGI SNP Detail		 Chr6:99165577 Foxp1 within coordinates of
Rr399787 within coordinates of
Rr635365 within coordinates of
Tssr57967 466 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250531763
MGI SNP Detail		 Chr6:99165586 Foxp1 within coordinates of
Rr399787 within coordinates of
Rr635365 within coordinates of
Tssr57967 457 bp upstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220477544
MGI SNP Detail		 Chr6:99165621 Foxp1 within coordinates of
Rr399787 within coordinates of
Rr635365 within coordinates of
Tssr57967 422 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251379154
MGI SNP Detail		 Chr6:99165813 Foxp1 within coordinates of
Rr399787 within coordinates of
Rr635365 within coordinates of
Tssr57967 230 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260274893
MGI SNP Detail		 Chr6:99165875 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 168 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36379661
MGI SNP Detail		 Chr6:99166051 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 within coordinates of
 SNP A/G G G G G A G G
rs225174550
MGI SNP Detail		 Chr6:99166107 Foxp1 within coordinates of
Rr635365 within coordinates of
Tssr57967 40 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs239106800
MGI SNP Detail		 Chr6:99166259 Foxp1 within coordinates of
Tssr57967 192 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs256115213
MGI SNP Detail		 Chr6:99166662 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 595 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225062763
MGI SNP Detail		 Chr6:99167435 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1368 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs585065762
MGI SNP Detail		 Chr6:99167617 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1550 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T
rs236430946
MGI SNP Detail		 Chr6:99167657 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1590 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs264535610
MGI SNP Detail		 Chr6:99167732 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1665 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs233594540
MGI SNP Detail		 Chr6:99167738 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1671 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258835679
MGI SNP Detail		 Chr6:99167798 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1731 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218654948
MGI SNP Detail		 Chr6:99167876 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1809 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228282514
MGI SNP Detail		 Chr6:99167938 Foxp1 within coordinates of
Rr406447 within coordinates of
Tssr57967 1871 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 50 of 50
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory