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Mouse SNP Summary
Symbol
Name
ID 		Tssr58077
transcription start site region 58077
MGI:5985844

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Showing SNP(s) 1 - 63 of 63

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236459777
MGI SNP Detail		 Chr6:108635852 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Gm17055 within coordinates of
Rr636154 within coordinates of
Tssr58077 1964 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs252764107
MGI SNP Detail		 Chr6:108635943 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Gm17055 within coordinates of
Rr636154 within coordinates of
Tssr58077 1873 bp upstream
 SNP C/T T C
rs37110686
MGI SNP Detail		 Chr6:108636145 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Cpgi17812 within coordinates of
Gm17055 within coordinates of
Tssr58077 1671 bp upstream
 SNP G/T G G G G G G G G G T G G T G G G
rs236565866
MGI SNP Detail		 Chr6:108636200 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Cpgi17812 within coordinates of
Gm17055 within coordinates of
Tssr58077 1616 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A
rs258175159
MGI SNP Detail		 Chr6:108636214 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Cpgi17812 within coordinates of
Gm17055 within coordinates of
Tssr58077 1602 bp upstream
 SNP C/G G G C G G C C C G G C G C G C G G G G C G C C G
rs219865241
MGI SNP Detail		 Chr6:108636252 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Cpgi17812 within coordinates of
Gm17055 within coordinates of
Tssr58077 1564 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237245878
MGI SNP Detail		 Chr6:108636363 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Cpgi17812 within coordinates of
Gm17055 within coordinates of
Tssr58077 1453 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs30852065
MGI SNP Detail		 Chr6:108636381 0610040F04Rik within coordinates of
4833447P13Rik within coordinates of
Cpgi17812 within coordinates of
Gm17055 within coordinates of
Tssr58077 1435 bp upstream
Tssr62390 within coordinates of
 SNP C/G G C C G
rs220433741
MGI SNP Detail		 Chr6:108636503 0610040F04Rik within coordinates of
Cpgi17812 within coordinates of
Gm17055 within coordinates of
Rr636155 within coordinates of
Tssr58077 1313 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs241267419
MGI SNP Detail		 Chr6:108636774 0610040F04Rik within coordinates of
Cpgi17812 within coordinates of
Rr636155 within coordinates of
Tssr58077 1042 bp upstream
Tssr62391 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579948588
MGI SNP Detail		 Chr6:108636899 0610040F04Rik within coordinates of
Cpgi17812 within coordinates of
Tssr58077 917 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs265914189
MGI SNP Detail		 Chr6:108637219 0610040F04Rik within coordinates of
Cpgi17812 within coordinates of
Rr636156 within coordinates of
Tssr58077 597 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228755018
MGI SNP Detail		 Chr6:108637268 0610040F04Rik within coordinates of
Cpgi17812 within coordinates of
Rr636156 within coordinates of
Tssr58077 548 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G
rs252369851
MGI SNP Detail		 Chr6:108637354 0610040F04Rik within coordinates of
Cpgi17812 within coordinates of
Rr636156 within coordinates of
Tssr58077 462 bp upstream
 SNP A/G A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582555118
MGI SNP Detail		 Chr6:108637505 0610040F04Rik within coordinates of
Cpgi17812 within coordinates of
Rr636156 within coordinates of
Tssr58077 311 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs262737017
MGI SNP Detail		 Chr6:108637931 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 104 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225644960
MGI SNP Detail		 Chr6:108637964 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 137 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247354350
MGI SNP Detail		 Chr6:108638008 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 181 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs215371032
MGI SNP Detail		 Chr6:108638036 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 209 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236421526
MGI SNP Detail		 Chr6:108638046 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 219 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs36348811
MGI SNP Detail		 Chr6:108638094 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 267 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs213704006
MGI SNP Detail		 Chr6:108638110 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 283 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235111589
MGI SNP Detail		 Chr6:108638209 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 382 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262667863
MGI SNP Detail		 Chr6:108638224 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 397 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs30771616
MGI SNP Detail		 Chr6:108638231 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 404 bp downstream
 SNP C/T T T T T T T T T C C T C T T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233834707
MGI SNP Detail		 Chr6:108638266 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 439 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs251723121
MGI SNP Detail		 Chr6:108638282 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 455 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220584038
MGI SNP Detail		 Chr6:108638294 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Rr636158 within coordinates of
Tssr58077 467 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs250739935
MGI SNP Detail		 Chr6:108638395 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Tssr58077 568 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs263883352
MGI SNP Detail		 Chr6:108638404 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Tssr58077 577 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs221030996
MGI SNP Detail		 Chr6:108638430 Bhlhe40 within coordinates of
Cpgi17812 within coordinates of
Tssr58077 603 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241083436
MGI SNP Detail		 Chr6:108638734 Bhlhe40 within coordinates of
Rr399817 within coordinates of
Rr636159 within coordinates of
Tssr58077 907 bp downstream
Tssr58078 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51080898
MGI SNP Detail		 Chr6:108638741 Bhlhe40 within coordinates of
Rr399817 within coordinates of
Rr636159 within coordinates of
Tssr58077 914 bp downstream
 SNP C/T T C
rs225605965
MGI SNP Detail		 Chr6:108638795 Bhlhe40 within coordinates of
Rr399817 within coordinates of
Rr636159 within coordinates of
Tssr58077 968 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs241167683
MGI SNP Detail		 Chr6:108638885 Bhlhe40 within coordinates of
Rr636159 within coordinates of
Tssr58077 1058 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs46846376
MGI SNP Detail		 Chr6:108638900 Bhlhe40 within coordinates of
Rr636159 within coordinates of
Tssr58077 1073 bp downstream
 SNP A/C A C
rs48350083
MGI SNP Detail		 Chr6:108638985 Bhlhe40 within coordinates of
Tssr58077 1158 bp downstream
 SNP C/T T T C
rs259248377
MGI SNP Detail		 Chr6:108639067 Bhlhe40 within coordinates of
Tssr58077 1240 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49425082
MGI SNP Detail		 Chr6:108639075 Bhlhe40 within coordinates of
Tssr58077 1248 bp downstream
 SNP A/G G G A
rs48658660
MGI SNP Detail		 Chr6:108639082 Bhlhe40 within coordinates of
Tssr58077 1255 bp downstream
 SNP A/G A A G
rs251844053
MGI SNP Detail		 Chr6:108639088 Bhlhe40 within coordinates of
Tssr58077 1261 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214009892
MGI SNP Detail		 Chr6:108639155 Bhlhe40 within coordinates of
Tssr58077 1328 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G
rs233802021
MGI SNP Detail		 Chr6:108639158 Bhlhe40 within coordinates of
Tssr58077 1331 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251504337
MGI SNP Detail		 Chr6:108639160 Bhlhe40 within coordinates of
Tssr58077 1333 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T G T T T T
rs50071661
MGI SNP Detail		 Chr6:108639169 Bhlhe40 within coordinates of
Tssr58077 1342 bp downstream
 SNP C/T T T C
rs240124082
MGI SNP Detail		 Chr6:108639176 Bhlhe40 within coordinates of
Tssr58077 1349 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs38449275
MGI SNP Detail		 Chr6:108639216 Bhlhe40 within coordinates of
Tssr58077 1389 bp downstream
 SNP G/T T T T T T G T T T T T
rs220989295
MGI SNP Detail		 Chr6:108639379 Bhlhe40 within coordinates of
Tssr58077 1552 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs586275739
MGI SNP Detail		 Chr6:108639446 Bhlhe40 within coordinates of
Tssr58077 1619 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs580622523
MGI SNP Detail		 Chr6:108639457 Bhlhe40 within coordinates of
Tssr58077 1630 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37166995
MGI SNP Detail		 Chr6:108639462 Bhlhe40 within coordinates of
Tssr58077 1635 bp downstream
 SNP G/T G G G G G G T G G G G G G G G
rs251992198
MGI SNP Detail		 Chr6:108639512 Bhlhe40 within coordinates of
Tssr58077 1685 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219574380
MGI SNP Detail		 Chr6:108639616 Bhlhe40 within coordinates of
Tssr58077 1789 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241153444
MGI SNP Detail		 Chr6:108639628 Bhlhe40 within coordinates of
Tssr58077 1801 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs37147222
MGI SNP Detail		 Chr6:108639637 Bhlhe40 within coordinates of
Tssr58077 1810 bp downstream
 SNP A/G G G G G G G G G A G G G G G A G
rs583084022
MGI SNP Detail		 Chr6:108639712 Bhlhe40 within coordinates of
Tssr58077 1885 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs49421401
MGI SNP Detail		 Chr6:108639720 Bhlhe40 within coordinates of
Tssr58077 1893 bp downstream
 SNP A/G A A G
rs46221489
MGI SNP Detail		 Chr6:108639744 Bhlhe40 within coordinates of
Tssr58077 1917 bp downstream
 SNP T T
rs234852361
MGI SNP Detail		 Chr6:108639764 Bhlhe40 within coordinates of
Tssr58077 1937 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586764380
MGI SNP Detail		 Chr6:108639813 Bhlhe40 within coordinates of
Tssr58077 1986 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36364201
MGI SNP Detail		 Chr6:108639815 Bhlhe40 within coordinates of
Tssr58077 1988 bp downstream
 SNP A/C A A A A A A A A A A C A A A A
rs583066392
MGI SNP Detail		 Chr6:108639817 Bhlhe40 within coordinates of
Tssr58077 1990 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587013251
MGI SNP Detail		 Chr6:108639822 Bhlhe40 within coordinates of
Tssr58077 1995 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 63 of 63
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory