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Mouse SNP Summary
Symbol
Name
ID 		Tssr59565
transcription start site region 59565
MGI:5987332

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Showing SNP(s) 1 - 39 of 39

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NZW/LacJ
PL/J
PWD/PhJ
RF/J
RIIIS/J
SEA/GnJ
SM/J
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs37608830
MGI SNP Detail		 Chr6:145877902 Sspn within coordinates of
Tssr59565 1961 bp upstream
 SNP A/T T T A T T A T A T T A A A A T T
rs37076783
MGI SNP Detail		 Chr6:145877932 Sspn within coordinates of
Tssr59565 1931 bp upstream
 SNP G/T G G T G G T G T G G T T T T G G
rs37020986
MGI SNP Detail		 Chr6:145877965 Sspn within coordinates of
Tssr59565 1898 bp upstream
 SNP C/G G G C G G C C G G C C C C G G
rs46528138
MGI SNP Detail		 Chr6:145877984 Sspn within coordinates of
Tssr59565 1879 bp upstream
 SNP G/T G T
rs38163031
MGI SNP Detail		 Chr6:145877999 Sspn within coordinates of
Tssr59565 1864 bp upstream
 SNP C/G G G C G G C G G C C C C G G
rs36467056
MGI SNP Detail		 Chr6:145878051 Sspn within coordinates of
Tssr59565 1812 bp upstream
 SNP C/T T T C T T C C C T C C C C T T
rs36927078
MGI SNP Detail		 Chr6:145878108 Sspn within coordinates of
Tssr59565 1755 bp upstream
 SNP C/T T T C T T C C C T C C C C T T
rs244000218
MGI SNP Detail		 Chr6:145878245 Sspn within coordinates of
Tssr59565 1618 bp upstream
 SNP C/T T C
rs213678166
MGI SNP Detail		 Chr6:145878264 Sspn within coordinates of
Tssr59565 1599 bp upstream
 SNP G/T T G
rs212447454
MGI SNP Detail		 Chr6:145878754 Rr134046 within coordinates of
Rr145945 within coordinates of
Sspn within coordinates of
Tssr59565 1109 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs37618233
MGI SNP Detail		 Chr6:145878792 Rr134046 within coordinates of
Rr145945 within coordinates of
Sspn within coordinates of
Tssr59565 1071 bp upstream
 SNP A/C A A C A A C C C A C C C C A A
rs264349534
MGI SNP Detail		 Chr6:145878976 Sspn within coordinates of
Tssr59565 887 bp upstream
 SNP C/G G C
rs46710305
MGI SNP Detail		 Chr6:145879272 Sspn within coordinates of
Tssr59565 591 bp upstream
 SNP A/T T T A A T
rs46471350
MGI SNP Detail		 Chr6:145879282 Sspn within coordinates of
Tssr59565 581 bp upstream
 SNP C/T T T C C T
rs251390615
MGI SNP Detail		 Chr6:145879299 Sspn within coordinates of
Tssr59565 564 bp upstream
 SNP A/T T A
rs220215578
MGI SNP Detail		 Chr6:145879302 Sspn within coordinates of
Tssr59565 561 bp upstream
 SNP A/C C A
rs37581850
MGI SNP Detail		 Chr6:145879323 Sspn within coordinates of
Tssr59565 540 bp upstream
 SNP A/T A A T A A T A A T T T T A A
rs36752977
MGI SNP Detail		 Chr6:145880005 Cpgi18164 within coordinates of
Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 118 bp downstream
 SNP C/T T T C T T C C C T C C C C T T
rs30840289
MGI SNP Detail		 Chr6:145880134 Cpgi18164 within coordinates of
Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 247 bp downstream
 SNP A/G G G G A G G A G A A G A A G G
rs29874790
MGI SNP Detail		 Chr6:145880140 Cpgi18164 within coordinates of
Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 253 bp downstream
 SNP C/G G G G G C C G
rs30019949
MGI SNP Detail		 Chr6:145880274 Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 387 bp downstream
 SNP G/T G G G T G T G T G T G T G G G
rs36383313
MGI SNP Detail		 Chr6:145880542 Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 655 bp downstream
 SNP C/T C C C C C C C T C C C C C
rs30706493
MGI SNP Detail		 Chr6:145880561 Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 674 bp downstream
 SNP A/C C C C A C C A C A C C A A A A C C
rs29879152
MGI SNP Detail		 Chr6:145880652 Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 765 bp downstream
 SNP A/G A A A G A A A G G A G G G G A A
rs38073887
MGI SNP Detail		 Chr6:145880769 Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 882 bp downstream
 SNP C/T C C T C C T T C C T T T C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
DBA/2J
FVB/NJ
I/LnJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NZW/LacJ
PL/J
PWD/PhJ
RF/J
RIIIS/J
SEA/GnJ
SM/J
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225561015
MGI SNP Detail		 Chr6:145880993 Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 1106 bp downstream
 SNP C/G G C
rs243946959
MGI SNP Detail		 Chr6:145881002 Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 1115 bp downstream
 SNP C/T C T
rs211757864
MGI SNP Detail		 Chr6:145881126 D6Mit200 within coordinates of
Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 1239 bp downstream
 SNP A/C C A
rs30323422
MGI SNP Detail		 Chr6:145881168 D6Mit200 within coordinates of
Rr145946 within coordinates of
Sspn within coordinates of
Tssr59565 1281 bp downstream
 SNP A/G A A G A A G A A G A A G A G A A A
rs37498988
MGI SNP Detail		 Chr6:145881300 Sspn within coordinates of
Tssr59565 1413 bp downstream
 SNP C/T T T C T T C C C T C C C C T T
rs49899297
MGI SNP Detail		 Chr6:145881470 Sspn within coordinates of
Tssr59565 1583 bp downstream
 SNP G/T G G T T G
rs48726799
MGI SNP Detail		 Chr6:145881472 Sspn within coordinates of
Tssr59565 1585 bp downstream
 SNP C/T C C T T C
rs38804706
MGI SNP Detail		 Chr6:145881496 Sspn within coordinates of
Tssr59565 1609 bp downstream
 SNP A/G A A A G A A G A G A A G G G A A
rs39567366
MGI SNP Detail		 Chr6:145881544 Sspn within coordinates of
Tssr59565 1657 bp downstream
 SNP A/G/T A A A A A A T A A T G A A
rs37031510
MGI SNP Detail		 Chr6:145881602 Sspn within coordinates of
Tssr59565 1715 bp downstream
 SNP A/G G G G A G G A A G G A G A A G G
rs36287374
MGI SNP Detail		 Chr6:145881691 Sspn within coordinates of
Tssr59565 1804 bp downstream
 SNP C/T C C C T C C T C T C C T T T T C C
rs48419450
MGI SNP Detail		 Chr6:145881782 Sspn within coordinates of
Tssr59565 1895 bp downstream
 SNP G/T G G T T G
rs46718591
MGI SNP Detail		 Chr6:145881845 Sspn within coordinates of
Tssr59565 1958 bp downstream
 SNP A/G A A G G A
rs260230540
MGI SNP Detail		 Chr6:145881856 Sspn within coordinates of
Tssr59565 1969 bp downstream
 SNP C/T C T
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Showing SNP(s) 1 - 39 of 39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory