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Mouse SNP Summary
Symbol
Name
ID 		Tssr59568
transcription start site region 59568
MGI:5987335

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Showing SNP(s) 1 - 50 of 50

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs37178569
MGI SNP Detail
Alliance Variant		 Chr6:146015498 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1791 bp upstream
 SNP A/C C C C C C C C C C C C C C A C
rs38392684
MGI SNP Detail
Alliance Variant		 Chr6:146015641 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1648 bp upstream
 SNP G/T T T T T G G T T G T
rs240604551
MGI SNP Detail
Alliance Variant		 Chr6:146015699 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1590 bp upstream
 SNP G/T G T
rs38240397
MGI SNP Detail
Alliance Variant		 Chr6:146015755 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1534 bp upstream
 SNP C/G C G C G G C C G G C G C C C
rs224650265
MGI SNP Detail
Alliance Variant		 Chr6:146015809 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1480 bp upstream
 SNP C/T T C
rs38829299
MGI SNP Detail
Alliance Variant		 Chr6:146015819 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1470 bp upstream
 SNP A/G A A G A G A A G G A G G A A
rs38674380
MGI SNP Detail
Alliance Variant		 Chr6:146015853 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1436 bp upstream
 SNP A/G G G A G G G A G G A G A G G
rs38626276
MGI SNP Detail
Alliance Variant		 Chr6:146015860 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1429 bp upstream
 SNP C/T T T T T T T T C T T C C T T C T T
rs37168783
MGI SNP Detail
Alliance Variant		 Chr6:146015880 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1409 bp upstream
 SNP C/T C C T C C T C C C T C T C C C
rs266193820
MGI SNP Detail
Alliance Variant		 Chr6:146015916 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1373 bp upstream
 SNP C/G C G
rs38530748
MGI SNP Detail
Alliance Variant		 Chr6:146015994 Gm66753 within coordinates of
Itpr2 Intron
Tssr59568 1295 bp upstream
 SNP A/G A A G A A A G A A G G A G A A
rs249215639
MGI SNP Detail
Alliance Variant		 Chr6:146016102 Itpr2 Intron
Tssr59568 1187 bp upstream
 SNP A/T T A
rs263238754
MGI SNP Detail
Alliance Variant		 Chr6:146016125 Itpr2 Intron
Tssr59568 1164 bp upstream
 SNP A/G G A
rs37479927
MGI SNP Detail
Alliance Variant		 Chr6:146016285 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 1004 bp upstream
 SNP G/T G G G G G G G T T G G G G
rs37013329
MGI SNP Detail
Alliance Variant		 Chr6:146016306 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 983 bp upstream
 SNP C/T T T C T T C T T C C T C C T T
rs256644195
MGI SNP Detail
Alliance Variant		 Chr6:146016372 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 917 bp upstream
 SNP C/T T C
rs224112928
MGI SNP Detail
Alliance Variant		 Chr6:146016392 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 897 bp upstream
 SNP A/G A G
rs254461674
MGI SNP Detail
Alliance Variant		 Chr6:146016496 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 793 bp upstream
 SNP A/C C A
rs36775672
MGI SNP Detail
Alliance Variant		 Chr6:146016604 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 685 bp upstream
 SNP C/T C C T C C T T C C T T C T C C
rs238307763
MGI SNP Detail
Alliance Variant		 Chr6:146016690 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 599 bp upstream
 SNP G/T G T
rs47824044
MGI SNP Detail
Alliance Variant		 Chr6:146016772 Itpr2 Intron
Rr641277 within coordinates of
Tssr59568 517 bp upstream
 SNP C/T C C T T C
rs37880363
MGI SNP Detail
Alliance Variant		 Chr6:146016808 Itpr2 Intron
Tssr59568 481 bp upstream
 SNP A/G A A A A A A A G A A G A A A
rs214117752
MGI SNP Detail
Alliance Variant		 Chr6:146016978 Itpr2 Intron
Tssr59568 311 bp upstream
 SNP C/G G C
rs36328932
MGI SNP Detail
Alliance Variant		 Chr6:146017025 Itpr2 Intron
Tssr59568 264 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs232455576
MGI SNP Detail
Alliance Variant		 Chr6:146017083 Itpr2 Intron
Tssr59568 206 bp upstream
 SNP C/G C G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
C57BL/6J
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs37446040
MGI SNP Detail
Alliance Variant		 Chr6:146017091 Itpr2 Intron
Tssr59568 198 bp upstream
 SNP C/G C C G C C G G C C C C C
rs250098627
MGI SNP Detail
Alliance Variant		 Chr6:146017093 Itpr2 Intron
Tssr59568 196 bp upstream
 SNP C/T C T
rs218885654
MGI SNP Detail
Alliance Variant		 Chr6:146017179 Itpr2 Intron
Tssr59568 110 bp upstream
 SNP A/G A G
rs36757234
MGI SNP Detail
Alliance Variant		 Chr6:146017202 Itpr2 Intron
Tssr59568 87 bp upstream
 SNP C/T T T C T T C C C T T C C T C C T T
rs38106563
MGI SNP Detail
Alliance Variant		 Chr6:146017250 Itpr2 Intron
Tssr59568 39 bp upstream
 SNP C/T C C T C C C T C C T C C C C
rs36853217
MGI SNP Detail
Alliance Variant		 Chr6:146017470 Itpr2 Intron
Tssr59568 170 bp downstream
 SNP C/G C C C C C C C C C C C C C G C
rs226383850
MGI SNP Detail
Alliance Variant		 Chr6:146017485 Itpr2 Intron
Tssr59568 185 bp downstream
 SNP C/T C T
rs37655003
MGI SNP Detail
Alliance Variant		 Chr6:146017562 Itpr2 Intron
Tssr59568 262 bp downstream
 SNP A/G G G G G G G G G G G G G G A G
rs246675643
MGI SNP Detail
Alliance Variant		 Chr6:146017619 Itpr2 Intron
Tssr59568 319 bp downstream
 SNP A/G A G
rs265517603
MGI SNP Detail
Alliance Variant		 Chr6:146017762 Itpr2 Intron
Tssr59568 462 bp downstream
 SNP A/G A G
rs220381711
MGI SNP Detail
Alliance Variant		 Chr6:146017801 Itpr2 Intron
Tssr59568 501 bp downstream
 SNP A/G A G
rs30127545
MGI SNP Detail
Alliance Variant		 Chr6:146018089 Itpr2 Intron
Tssr59568 789 bp downstream
 SNP A/G G G G A A G
rs30617666
MGI SNP Detail
Alliance Variant		 Chr6:146018194 Itpr2 Intron
Tssr59568 894 bp downstream
 SNP C/G G G G C C G
rs224065371
MGI SNP Detail
Alliance Variant		 Chr6:146018235 Itpr2 Intron
Tssr59568 935 bp downstream
 SNP A/G A G
rs30561866
MGI SNP Detail
Alliance Variant		 Chr6:146018378 Itpr2 Intron
Tssr59568 1078 bp downstream
 SNP A/G A A A G G A
rs30177925
MGI SNP Detail
Alliance Variant		 Chr6:146018435 Itpr2 Intron
Tssr59568 1135 bp downstream
 SNP A/G G G G A A G
rs232792310
MGI SNP Detail
Alliance Variant		 Chr6:146018590 Itpr2 Intron
Tssr59568 1290 bp downstream
 SNP G/T G T
rs30707882
MGI SNP Detail
Alliance Variant		 Chr6:146018885 Itpr2 Intron
Tssr59568 1585 bp downstream
 SNP A/C C C C A A C
rs30513277
MGI SNP Detail
Alliance Variant		 Chr6:146018886 Itpr2 Intron
Tssr59568 1586 bp downstream
 SNP A/G G G G A A G
rs29968351
MGI SNP Detail
Alliance Variant		 Chr6:146018972 Itpr2 Intron
Tssr59568 1672 bp downstream
 SNP C/T C C C T T C
rs30123255
MGI SNP Detail
Alliance Variant		 Chr6:146019035 Itpr2 Intron
Tssr59568 1735 bp downstream
 SNP A/T T T T A A T
rs30416038
MGI SNP Detail
Alliance Variant		 Chr6:146019061 Itpr2 Intron
Tssr59568 1761 bp downstream
 SNP A/G A A A G G A
rs29831505
MGI SNP Detail
Alliance Variant		 Chr6:146019180 Itpr2 Intron
Tssr59568 1880 bp downstream
 SNP C/T T T T T C C T
rs264368876
MGI SNP Detail
Alliance Variant		 Chr6:146019281 Itpr2 Intron
Tssr59568 1981 bp downstream
 SNP A/G G A
rs30072634
MGI SNP Detail
Alliance Variant		 Chr6:146019289 Itpr2 Intron
Tssr59568 1989 bp downstream
 SNP A/C A A A A C C A
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Showing SNP(s) 1 - 50 of 50
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
07/29/2025
MGI 6.24 		The Jackson Laboratory