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Mouse SNP Summary
Symbol
Name
ID 		Tssr59600
transcription start site region 59600
MGI:5987367

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Showing SNP(s) 1 - 26 of 26

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
WSB/EiJ
ZALENDE/EiJ
rs30848900
MGI SNP Detail		 Chr6:146788260 Tssr59600 1719 bp upstream
 SNP C/T C C T T T C
rs29919956
MGI SNP Detail		 Chr6:146788267 Tssr59600 1712 bp upstream
 SNP G/T G G G T T T G
rs219823732
MGI SNP Detail		 Chr6:146788551 Tssr59600 1428 bp upstream
 SNP A/T A T
rs249114130
MGI SNP Detail		 Chr6:146788641 Tssr59600 1338 bp upstream
 SNP A/G G G G G A A G G G A A A A A A A A A A A G A A A A G A A A G G A G A A A A A A A G G G A G A G G G
rs50310638
MGI SNP Detail		 Chr6:146788741 Tssr59600 1238 bp upstream
 SNP A/T T A A A T
rs50739368
MGI SNP Detail		 Chr6:146788744 Tssr59600 1235 bp upstream
 SNP C/T C T T T C
rs229696236
MGI SNP Detail		 Chr6:146789078 Tssr59600 901 bp upstream
 SNP G/T G T
rs241508182
MGI SNP Detail		 Chr6:146789273 Rr145955 within coordinates of
Tssr59600 706 bp upstream
 SNP C/T T C
rs266215770
MGI SNP Detail		 Chr6:146789382 Rr145955 within coordinates of
Tssr59600 597 bp upstream
 SNP C/T C T
rs46892728
MGI SNP Detail		 Chr6:146789600 Cpgi18173 within coordinates of
Gm66444 within coordinates of
Rr145955 within coordinates of
Tssr59600 379 bp upstream
 SNP C/G G G C G
rs48858340
MGI SNP Detail		 Chr6:146789741 Cpgi18173 within coordinates of
Gm66444 within coordinates of
Rr145955 within coordinates of
Tssr59600 238 bp upstream
 SNP C/T C C T T C
rs51074482
MGI SNP Detail		 Chr6:146789861 Cpgi18173 within coordinates of
Gm66444 within coordinates of
Rr145955 within coordinates of
Tssr59600 118 bp upstream
 SNP G/T T G T
rs51765843
MGI SNP Detail		 Chr6:146789929 Cpgi18173 within coordinates of
Gm66444 within coordinates of
Rr145955 within coordinates of
Tssr59600 50 bp upstream
 SNP G G
rs226659037
MGI SNP Detail		 Chr6:146790513 Cpgi18173 within coordinates of
Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 427 bp downstream
 SNP A/C A C
rs244966827
MGI SNP Detail		 Chr6:146790738 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 652 bp downstream
 SNP G/T T G
rs47925683
MGI SNP Detail		 Chr6:146790843 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 757 bp downstream
 SNP C/G G C C G
rs30515407
MGI SNP Detail		 Chr6:146790925 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 839 bp downstream
 SNP C/T C T T T C
rs260755556
MGI SNP Detail		 Chr6:146790995 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 909 bp downstream
 SNP A/T T A
rs29865658
MGI SNP Detail		 Chr6:146791039 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 953 bp downstream
 SNP A/G A A G G A
rs30168733
MGI SNP Detail		 Chr6:146791104 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 1018 bp downstream
 SNP A/C A A C C A
rs47633946
MGI SNP Detail		 Chr6:146791126 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 1040 bp downstream
 SNP C/T T T C T
rs30613467
MGI SNP Detail		 Chr6:146791164 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 1078 bp downstream
 SNP C/T T T C C C T
rs30512354
MGI SNP Detail		 Chr6:146791175 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 1089 bp downstream
 SNP A/G G G A A A G
rs261298754
MGI SNP Detail		 Chr6:146791743 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 1657 bp downstream
 SNP C/T C T
rs30656274
MGI SNP Detail		 Chr6:146791874 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 1788 bp downstream
 SNP A/G A A A G G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
I/LnJ
JF1/MsJ
KK/HlJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
WSB/EiJ
ZALENDE/EiJ
rs30070406
MGI SNP Detail		 Chr6:146791967 Ppfibp1 within coordinates of
Rr145955 within coordinates of
Tssr59600 1881 bp downstream
 SNP A/G G G G A A A G
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Showing SNP(s) 1 - 26 of 26
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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