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Mouse SNP Summary
Symbol
Name
ID 		Tssr60879
transcription start site region 60879
MGI:5988646

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Showing SNP(s) 1 - 38 of 38

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30268275
MGI SNP Detail		 Chr6:49189984 D030074P21Rik within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1963 bp downstream
 SNP A/G G A G A A A
rs252493089
MGI SNP Detail		 Chr6:49190118 D030074P21Rik within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1829 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266175371
MGI SNP Detail		 Chr6:49190267 Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1680 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G G A A A G G A A A A A G A A A A A A G A A A A A A A G A A A A
rs233184425
MGI SNP Detail		 Chr6:49190289 Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1658 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243115782
MGI SNP Detail		 Chr6:49190322 Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1625 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs212057670
MGI SNP Detail		 Chr6:49190343 Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1604 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226092258
MGI SNP Detail		 Chr6:49190473 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1474 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243786166
MGI SNP Detail		 Chr6:49190491 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1456 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs30662942
MGI SNP Detail		 Chr6:49190686 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1261 bp downstream
 SNP A/G A G A G A G
rs239811863
MGI SNP Detail		 Chr6:49190933 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 1014 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs260719988
MGI SNP Detail		 Chr6:49191062 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 885 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs217775535
MGI SNP Detail		 Chr6:49191126 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 821 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs586638063
MGI SNP Detail		 Chr6:49191166 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 781 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs230323941
MGI SNP Detail		 Chr6:49191188 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 759 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G
rs249251895
MGI SNP Detail		 Chr6:49191198 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 749 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs219951103
MGI SNP Detail		 Chr6:49191204 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 743 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs30913434
MGI SNP Detail		 Chr6:49191449 Cpgi17381 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 498 bp downstream
 SNP A/T A A T A A T A
rs262206540
MGI SNP Detail		 Chr6:49191822 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Igf2bp3 within coordinates of
Rr146266 within coordinates of
Tssr60879 125 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248093307
MGI SNP Detail		 Chr6:49192071 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 115 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs264519032
MGI SNP Detail		 Chr6:49192155 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 199 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T T C T T C C C T T C C C C T T C C C C C C T C C C C C C C T C C C
rs234242052
MGI SNP Detail		 Chr6:49192225 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 269 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236853722
MGI SNP Detail		 Chr6:49192456 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 500 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253990265
MGI SNP Detail		 Chr6:49192476 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 520 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226155570
MGI SNP Detail		 Chr6:49192694 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 738 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243846843
MGI SNP Detail		 Chr6:49192701 Cpgi17381 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 745 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C T T C C C T T C C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580785746
MGI SNP Detail		 Chr6:49192889 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 933 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30116957
MGI SNP Detail		 Chr6:49192901 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 945 bp upstream
 SNP A/G G A G A G
rs231540096
MGI SNP Detail		 Chr6:49192924 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 968 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259988718
MGI SNP Detail		 Chr6:49193001 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1045 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217708179
MGI SNP Detail		 Chr6:49193152 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1196 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs584537530
MGI SNP Detail		 Chr6:49193202 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1246 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A G A A A A A A A A A A A
rs30917183
MGI SNP Detail		 Chr6:49193444 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1488 bp upstream
 SNP C/T T T C T T T T C T T C C T C T
rs231214049
MGI SNP Detail		 Chr6:49193454 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1498 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257446434
MGI SNP Detail		 Chr6:49193544 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1588 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38351528
MGI SNP Detail		 Chr6:49193669 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1713 bp upstream
 SNP C/T T T T T T T C T T C
rs245667528
MGI SNP Detail		 Chr6:49193701 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1745 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264391592
MGI SNP Detail		 Chr6:49193754 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1798 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A C C A A A C C A A A A C A A A A A A C A A A A A A A C A A A A
rs578801066
MGI SNP Detail		 Chr6:49193900 Gm56928 within coordinates of
Gm67966 within coordinates of
Rr146266 within coordinates of
Tssr60879 1944 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
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Showing SNP(s) 1 - 38 of 38
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory