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Mouse SNP Summary
Symbol
Name
ID 		Tssr61097
transcription start site region 61097
MGI:5988864

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216151702
MGI SNP Detail		 Chr6:54909469 Nod1 within coordinates of
Tssr61097 1975 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs238527510
MGI SNP Detail		 Chr6:54909575 Nod1 within coordinates of
Tssr61097 1869 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs263694576
MGI SNP Detail		 Chr6:54909654 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1790 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs225926214
MGI SNP Detail		 Chr6:54909674 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1770 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C T C
rs235388000
MGI SNP Detail		 Chr6:54909694 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1750 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs248220945
MGI SNP Detail		 Chr6:54909705 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1739 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C T C
rs218691143
MGI SNP Detail		 Chr6:54909710 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1734 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237658508
MGI SNP Detail		 Chr6:54909739 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1705 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G A G
rs262949387
MGI SNP Detail		 Chr6:54909760 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1684 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs224675263
MGI SNP Detail		 Chr6:54909761 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1683 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs246713959
MGI SNP Detail		 Chr6:54909783 Nod1 within coordinates of
Rr149917 within coordinates of
Tssr61097 1661 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266005162
MGI SNP Detail		 Chr6:54909826 Nod1 within coordinates of
Tssr61097 1618 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229023700
MGI SNP Detail		 Chr6:54909836 Nod1 within coordinates of
Tssr61097 1608 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A G A
rs243352199
MGI SNP Detail		 Chr6:54909850 Nod1 within coordinates of
Tssr61097 1594 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256570927
MGI SNP Detail		 Chr6:54909866 Nod1 within coordinates of
Tssr61097 1578 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225385209
MGI SNP Detail		 Chr6:54909874 Nod1 within coordinates of
Tssr61097 1570 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245460433
MGI SNP Detail		 Chr6:54909932 Nod1 within coordinates of
Tssr61097 1512 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215665753
MGI SNP Detail		 Chr6:54909948 Nod1 within coordinates of
Tssr61097 1496 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30098511
MGI SNP Detail		 Chr6:54909984 Nod1 within coordinates of
Tssr61097 1460 bp downstream
 SNP G/T T T T T T T G T T T G T T G G
rs253801139
MGI SNP Detail		 Chr6:54909996 Nod1 within coordinates of
Tssr61097 1448 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs584777299
MGI SNP Detail		 Chr6:54910035 Nod1 within coordinates of
Tssr61097 1409 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218989980
MGI SNP Detail		 Chr6:54910104 Nod1 within coordinates of
Tssr61097 1340 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs229881131
MGI SNP Detail		 Chr6:54910127 Nod1 within coordinates of
Tssr61097 1317 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248280557
MGI SNP Detail		 Chr6:54910129 Nod1 within coordinates of
Tssr61097 1315 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213090312
MGI SNP Detail		 Chr6:54910175 Nod1 within coordinates of
Tssr61097 1269 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231452701
MGI SNP Detail		 Chr6:54910194 Nod1 within coordinates of
Tssr61097 1250 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580684601
MGI SNP Detail		 Chr6:54910199 Nod1 within coordinates of
Tssr61097 1245 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262509471
MGI SNP Detail		 Chr6:54910206 Nod1 within coordinates of
Tssr61097 1238 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs224542601
MGI SNP Detail		 Chr6:54910232 Nod1 within coordinates of
Tssr61097 1212 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs249683565
MGI SNP Detail		 Chr6:54910244 Nod1 within coordinates of
Tssr61097 1200 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260477037
MGI SNP Detail		 Chr6:54910248 Nod1 within coordinates of
Tssr61097 1196 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs223677637
MGI SNP Detail		 Chr6:54910269 Nod1 within coordinates of
Tssr61097 1175 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs237534368
MGI SNP Detail		 Chr6:54910301 Nod1 within coordinates of
Tssr61097 1143 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs256532977
MGI SNP Detail		 Chr6:54910315 Nod1 within coordinates of
Tssr61097 1129 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225555119
MGI SNP Detail		 Chr6:54910374 Nod1 within coordinates of
Tssr61097 1070 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30098513
MGI SNP Detail		 Chr6:54910403 Nod1 within coordinates of
Tssr61097 1041 bp downstream
 SNP A/G G G G G G A G G G A G G A G
rs265429197
MGI SNP Detail		 Chr6:54910405 Nod1 within coordinates of
Tssr61097 1039 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30099445
MGI SNP Detail		 Chr6:54910452 Nod1 within coordinates of
Tssr61097 992 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs259179516
MGI SNP Detail		 Chr6:54910461 Nod1 within coordinates of
Tssr61097 983 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217302030
MGI SNP Detail		 Chr6:54910487 Nod1 within coordinates of
Tssr61097 957 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs223358188
MGI SNP Detail		 Chr6:54910552 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 892 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242975856
MGI SNP Detail		 Chr6:54910559 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 885 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213054896
MGI SNP Detail		 Chr6:54910583 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 861 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231597879
MGI SNP Detail		 Chr6:54910604 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 840 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs257938521
MGI SNP Detail		 Chr6:54910743 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 701 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G A G
rs216308118
MGI SNP Detail		 Chr6:54910756 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 688 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs238759307
MGI SNP Detail		 Chr6:54910788 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 656 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263951081
MGI SNP Detail		 Chr6:54910803 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 641 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs223843511
MGI SNP Detail		 Chr6:54910830 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 614 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237483254
MGI SNP Detail		 Chr6:54910853 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 591 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250764257
MGI SNP Detail		 Chr6:54910935 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 509 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs219350559
MGI SNP Detail		 Chr6:54910948 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 496 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs246650748
MGI SNP Detail		 Chr6:54910968 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 476 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263068779
MGI SNP Detail		 Chr6:54911073 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 371 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232649857
MGI SNP Detail		 Chr6:54911091 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 353 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247005622
MGI SNP Detail		 Chr6:54911092 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 352 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs259805645
MGI SNP Detail		 Chr6:54911108 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 336 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223511773
MGI SNP Detail		 Chr6:54911176 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 268 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30099447
MGI SNP Detail		 Chr6:54911223 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 221 bp downstream
 SNP A/G G G G G G G A G G G A G G G G
rs213566963
MGI SNP Detail		 Chr6:54911231 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 213 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs230179946
MGI SNP Detail		 Chr6:54911255 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 189 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30099449
MGI SNP Detail		 Chr6:54911260 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 184 bp downstream
 SNP A/G G G G G G G A G G G A G G A G
rs215938667
MGI SNP Detail		 Chr6:54911314 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 130 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs241124994
MGI SNP Detail		 Chr6:54911358 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 86 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248105901
MGI SNP Detail		 Chr6:54911360 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 84 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217766630
MGI SNP Detail		 Chr6:54911407 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 37 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230240248
MGI SNP Detail		 Chr6:54911454 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30099451
MGI SNP Detail		 Chr6:54911544 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 84 bp upstream
 SNP C/T T T T T T T C T T T C T T C C
rs219762466
MGI SNP Detail		 Chr6:54911555 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 95 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237279008
MGI SNP Detail		 Chr6:54911572 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 112 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262756619
MGI SNP Detail		 Chr6:54911599 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 139 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224772298
MGI SNP Detail		 Chr6:54911642 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 182 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249729256
MGI SNP Detail		 Chr6:54911646 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 186 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs30099453
MGI SNP Detail		 Chr6:54911674 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 214 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs217940290
MGI SNP Detail		 Chr6:54911710 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 250 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236710051
MGI SNP Detail		 Chr6:54911711 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 251 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255369044
MGI SNP Detail		 Chr6:54911714 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 254 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs230975319
MGI SNP Detail		 Chr6:54911725 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 265 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252170651
MGI SNP Detail		 Chr6:54911802 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 342 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265541705
MGI SNP Detail		 Chr6:54911857 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 397 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232580785
MGI SNP Detail		 Chr6:54911860 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 400 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217533743
MGI SNP Detail		 Chr6:54911949 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 489 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs229954822
MGI SNP Detail		 Chr6:54911958 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 498 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244577455
MGI SNP Detail		 Chr6:54911997 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 537 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214284063
MGI SNP Detail		 Chr6:54911998 Nod1 within coordinates of
Rr149918 within coordinates of
Tssr61097 538 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs30100275
MGI SNP Detail		 Chr6:54912016 Nod1 within coordinates of
Tssr61097 556 bp upstream
 SNP A/C A A A A A A C A A A C A C C
rs258947623
MGI SNP Detail		 Chr6:54912028 Nod1 within coordinates of
Tssr61097 568 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30100277
MGI SNP Detail		 Chr6:54912048 Nod1 within coordinates of
Tssr61097 588 bp upstream
 SNP C/T C C C C C C C C C C C C C T T
rs239312656
MGI SNP Detail		 Chr6:54912077 Nod1 within coordinates of
Tssr61097 617 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217647087
MGI SNP Detail		 Chr6:54912226 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 766 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236359493
MGI SNP Detail		 Chr6:54912241 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 781 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255327100
MGI SNP Detail		 Chr6:54912246 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 786 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223400982
MGI SNP Detail		 Chr6:54912247 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 787 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247640964
MGI SNP Detail		 Chr6:54912248 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 788 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs263521024
MGI SNP Detail		 Chr6:54912269 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 809 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs233314915
MGI SNP Detail		 Chr6:54912271 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 811 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs248219291
MGI SNP Detail		 Chr6:54912316 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 856 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261404618
MGI SNP Detail		 Chr6:54912330 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 870 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224260912
MGI SNP Detail		 Chr6:54912361 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 901 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244364516
MGI SNP Detail		 Chr6:54912385 Nod1 within coordinates of
Rr140770 within coordinates of
Tssr61097 925 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 100 of 128
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory