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Mouse SNP Summary
Symbol
Name
ID 		Tssr64089
transcription start site region 64089
MGI:5991856

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Showing SNP(s) 1 - 18 of 18

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258529386
MGI SNP Detail		 Chr6:145809226 Bhlhe41 within coordinates of
Cpgi18162 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Tssr64089 1885 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G C G G G G G G G G G G G G
rs30471299
MGI SNP Detail		 Chr6:145809307 Bhlhe41 within coordinates of
Cpgi18162 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Tssr64089 1804 bp downstream
 SNP C/G G G C C G
rs236291543
MGI SNP Detail		 Chr6:145809469 Bhlhe41 within coordinates of
Cpgi18162 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Tssr64083 within coordinates of
Tssr64089 1642 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G G G A G G G G G G G G G G
rs247850349
MGI SNP Detail		 Chr6:145809669 Bhlhe41 within coordinates of
Cpgi18162 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Gm67128 within coordinates of
Tssr64089 1442 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212869908
MGI SNP Detail		 Chr6:145809702 Bhlhe41 within coordinates of
Cpgi18162 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Gm67128 within coordinates of
Tssr64089 1409 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C T T C C C C C T C C C C C C C C C C C
rs236142996
MGI SNP Detail		 Chr6:145810098 Bhlhe41 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Gm67128 within coordinates of
Tssr64089 1013 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs257553058
MGI SNP Detail		 Chr6:145810103 Bhlhe41 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Gm67128 within coordinates of
Tssr64089 1008 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs221764166
MGI SNP Detail		 Chr6:145810251 Bhlhe41 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Gm67128 within coordinates of
Tssr64089 860 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238354181
MGI SNP Detail		 Chr6:145810269 Bhlhe41 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Gm67128 within coordinates of
Tssr64089 842 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs251051564
MGI SNP Detail		 Chr6:145810320 Bhlhe41 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Gm67128 within coordinates of
Tssr64089 791 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs222451601
MGI SNP Detail		 Chr6:145810545 Bhlhe41 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Tssr64089 566 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs241837559
MGI SNP Detail		 Chr6:145810666 Bhlhe41 within coordinates of
Gm43909 within coordinates of
Gm67122 within coordinates of
Tssr64089 445 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs259280938
MGI SNP Detail		 Chr6:145811063 Bhlhe41 within coordinates of
Cpgi18163 within coordinates of
Gm67122 within coordinates of
Tssr64087 within coordinates of
Tssr64089 48 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs30164365
MGI SNP Detail		 Chr6:145811067 Bhlhe41 within coordinates of
Cpgi18163 within coordinates of
Gm67122 within coordinates of
Tssr64087 within coordinates of
Tssr64089 44 bp downstream
 SNP G/T G G G T T G
rs244541547
MGI SNP Detail		 Chr6:145811473 Cpgi18163 within coordinates of
Gm67122 within coordinates of
Gm67129 within coordinates of
Tssr64089 335 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254031839
MGI SNP Detail		 Chr6:145811942 Cpgi18163 within coordinates of
Gm67122 within coordinates of
Gm67129 within coordinates of
Tssr64089 804 bp upstream
 SNP C/G G C
rs215738499
MGI SNP Detail		 Chr6:145812472 Cpgi18163 within coordinates of
Gm67122 within coordinates of
Tssr64089 1334 bp upstream
 SNP C/T C T
rs30854911
MGI SNP Detail		 Chr6:145812859 Gm67122 within coordinates of
Tssr64089 1721 bp upstream
 SNP C/T C C T C C T C T T C
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Showing SNP(s) 1 - 18 of 18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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