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Mouse SNP Summary
Symbol
Name
ID 		Tssr64254
transcription start site region 64254
MGI:5992021

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Showing SNP(s) 1 - 16 of 16

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs51170152
MGI SNP Detail
Alliance Variant		 Chr7:3413249 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 1224 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
rs51595395
MGI SNP Detail
Alliance Variant		 Chr7:3413279 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 1194 bp upstream
 SNP G/T G G G G G G G G G G T G G T G
rs48285810
MGI SNP Detail
Alliance Variant		 Chr7:3413433 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 1040 bp upstream
 SNP A/T T T T T T T T T T A T T A T
rs47185550
MGI SNP Detail
Alliance Variant		 Chr7:3413519 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 954 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs49281206
MGI SNP Detail
Alliance Variant		 Chr7:3414377 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 96 bp upstream
 SNP A/G G G G G G G G G G G A G G A G
rs50622439
MGI SNP Detail
Alliance Variant		 Chr7:3414464 Cacng7 Coding-Synonymous
Cacng7 Splice-Site
Gm72265 within coordinates of
Tssr64254 9 bp upstream
 SNP A/G A A A A A A A A A A G A A G A
rs50309775
MGI SNP Detail
Alliance Variant		 Chr7:3414770 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 283 bp downstream
 SNP A/T T T T T T T T T T A T T A T
rs46650718
MGI SNP Detail
Alliance Variant		 Chr7:3414951 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 464 bp downstream
 SNP C/G C C C C C C C C C G C C G C
rs45857449
MGI SNP Detail
Alliance Variant		 Chr7:3414994 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 507 bp downstream
 SNP C/T C C C C C C C C C C T C C T C
rs49752988
MGI SNP Detail
Alliance Variant		 Chr7:3415011 Cacng7 Intron
Gm72265 within coordinates of
Tssr64254 524 bp downstream
 SNP C/T T T C C C T T C T T C C C C C C T C
rs49166093
MGI SNP Detail
Alliance Variant		 Chr7:3415135 Cacng7 Intron
Cpgi18210 within coordinates of
Gm72265 within coordinates of
Tssr64254 648 bp downstream
 SNP A/T A A A A A A A A A A T A A A A
rs45823990
MGI SNP Detail
Alliance Variant		 Chr7:3415194 Cacng7 Intron
Cpgi18210 within coordinates of
Gm72265 within coordinates of
Tssr64254 707 bp downstream
 SNP A/G A A A A A A A A A G A A A
rs48544287
MGI SNP Detail
Alliance Variant		 Chr7:3415560 Cacng7 mRNA-UTR
Cpgi18210 within coordinates of
Gm72265 within coordinates of
Tssr64254 1073 bp downstream
 SNP A/G A A A A A A A A A A G A A A
rs253945519
MGI SNP Detail
Alliance Variant		 Chr7:3416397 Cacng7 mRNA-UTR
Gm72265 within coordinates of
Tssr64254 1910 bp downstream
 SNP A/G A G
rs217147667
MGI SNP Detail
Alliance Variant		 Chr7:3416410 Cacng7 mRNA-UTR
Gm72265 within coordinates of
Tssr64254 1923 bp downstream
 SNP C/G C G
rs226796555
MGI SNP Detail
Alliance Variant		 Chr7:3416425 Cacng7 mRNA-UTR
Gm72265 within coordinates of
Tssr64254 1938 bp downstream
 SNP A/G A G
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Showing SNP(s) 1 - 16 of 16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory
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