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Mouse SNP Summary
Symbol
Name
ID 		Tssr65808
transcription start site region 65808
MGI:5993575

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs258839858
MGI SNP Detail		 Chr7:30449139 Tmem147os within coordinates of
Tssr65808 1812 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs49161371
MGI SNP Detail		 Chr7:30449218 Tmem147os within coordinates of
Tssr65808 1733 bp upstream
 SNP C/T C C C C C C T T C C C C C T T T C
rs253263949
MGI SNP Detail		 Chr7:30449462 Tmem147os within coordinates of
Tssr65808 1489 bp upstream
 SNP G/T G T
rs51497243
MGI SNP Detail		 Chr7:30449535 Tmem147os within coordinates of
Tssr65808 1416 bp upstream
 SNP C/T C C C C C C T C C C C C T C
rs219474592
MGI SNP Detail		 Chr7:30449586 Tmem147os within coordinates of
Tssr65808 1365 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T C T T T T
rs31780443
MGI SNP Detail		 Chr7:30449611 Tmem147os within coordinates of
Tssr65808 1340 bp upstream
 SNP G/T T T T T T T T T G G T T G T G G T
rs249795510
MGI SNP Detail		 Chr7:30449648 Tmem147os within coordinates of
Tssr65808 1303 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs218979699
MGI SNP Detail		 Chr7:30449656 Tmem147os within coordinates of
Tssr65808 1295 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G A G G G G
rs31118630
MGI SNP Detail		 Chr7:30449683 Tmem147os within coordinates of
Tssr65808 1268 bp upstream
 SNP C/T C C C T C T
rs32273628
MGI SNP Detail		 Chr7:30449697 Tmem147os within coordinates of
Tssr65808 1254 bp upstream
 SNP A/C/T C C C C C C C C T C C C A C T C
rs224591330
MGI SNP Detail		 Chr7:30449784 Tmem147os within coordinates of
Tssr65808 1167 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs48906307
MGI SNP Detail		 Chr7:30449853 Tmem147os within coordinates of
Tssr65808 1098 bp upstream
 SNP C/T T T T T T T T T T T C T T T T
rs31214474
MGI SNP Detail		 Chr7:30449881 Tmem147os within coordinates of
Tssr65808 1070 bp upstream
 SNP A/G A A G A G
rs262546958
MGI SNP Detail		 Chr7:30449964 Tmem147os within coordinates of
Tssr65808 987 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226370911
MGI SNP Detail		 Chr7:30450011 Tmem147os within coordinates of
Tssr65808 940 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs50006945
MGI SNP Detail		 Chr7:30450049 Tmem147os within coordinates of
Tssr65808 902 bp upstream
 SNP A/G G G A G G G G G G G G G G G G
rs47499699
MGI SNP Detail		 Chr7:30450175 Tmem147os within coordinates of
Tssr65808 776 bp upstream
 SNP A/G A A A A A A A A A A G A A A A
rs31448341
MGI SNP Detail		 Chr7:30450208 Tmem147os within coordinates of
Tssr65808 743 bp upstream
 SNP A/T T A A T A
rs32083886
MGI SNP Detail		 Chr7:30450357 Tmem147os within coordinates of
Tssr65808 594 bp upstream
 SNP A/G A A G A G G G G G G G A G A G G G G
rs32238548
MGI SNP Detail		 Chr7:30450363 Tmem147os within coordinates of
Tssr65808 588 bp upstream
 SNP A/G A A A A A A A G A A A A G G G A
rs218661633
MGI SNP Detail		 Chr7:30450370 Tmem147os within coordinates of
Tssr65808 581 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231329962
MGI SNP Detail		 Chr7:30450432 Tmem147os within coordinates of
Tssr65808 519 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs31720332
MGI SNP Detail		 Chr7:30450482 Tmem147os within coordinates of
Tssr65808 469 bp upstream
 SNP A/G A G G A G
rs32064915
MGI SNP Detail		 Chr7:30450491 Tmem147os within coordinates of
Tssr65808 460 bp upstream
 SNP A/G G A G G G
rs232642542
MGI SNP Detail		 Chr7:30450535 Tmem147os within coordinates of
Tssr65808 416 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32141021
MGI SNP Detail		 Chr7:30450540 Tmem147os within coordinates of
Tssr65808 411 bp upstream
 SNP C/T T T C
rs582005355
MGI SNP Detail		 Chr7:30450546 Tmem147os within coordinates of
Tssr65808 405 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs249481695
MGI SNP Detail		 Chr7:30450547 Tmem147os within coordinates of
Tssr65808 404 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs213090733
MGI SNP Detail		 Chr7:30450548 Tmem147os within coordinates of
Tssr65808 403 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T
rs45735732
MGI SNP Detail		 Chr7:30450603 Tmem147os within coordinates of
Tssr65808 348 bp upstream
 SNP C/T T T T T T T C T T T C T T T T
rs261000284
MGI SNP Detail		 Chr7:30450696 Tmem147os within coordinates of
Tssr65808 255 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224311070
MGI SNP Detail		 Chr7:30450757 Tmem147os within coordinates of
Tssr65808 194 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246460949
MGI SNP Detail		 Chr7:30450823 Tmem147os within coordinates of
Tssr65808 128 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250082171
MGI SNP Detail		 Chr7:30450864 Tmem147os within coordinates of
Tssr65808 87 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs46480653
MGI SNP Detail		 Chr7:30450874 Tmem147os within coordinates of
Tssr65808 77 bp upstream
 SNP A/G G G G G G G G G G G A G G G G
rs236197706
MGI SNP Detail		 Chr7:30450945 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 6 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254854367
MGI SNP Detail		 Chr7:30450979 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 11 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs224141534
MGI SNP Detail		 Chr7:30451112 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 144 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs13467916
MGI SNP Detail		 Chr7:30451154 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 186 bp downstream
 SNP C/T T T T T T T C T T C C T T T T T T T
rs52020542
MGI SNP Detail		 Chr7:30451273 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 305 bp downstream
 SNP A/G A A A G A G G G A G G A A A A A A G
rs231748779
MGI SNP Detail		 Chr7:30451331 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 363 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252753008
MGI SNP Detail		 Chr7:30451419 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 451 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs213668483
MGI SNP Detail		 Chr7:30451442 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 474 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C C C T T C T T T T T C T T C C C T C T T T C T T C T T T T T
rs586263619
MGI SNP Detail		 Chr7:30451461 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 493 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46394751
MGI SNP Detail		 Chr7:30451471 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 503 bp downstream
 SNP A/G A A G
rs584033214
MGI SNP Detail		 Chr7:30451515 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 547 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs50804954
MGI SNP Detail		 Chr7:30451599 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 631 bp downstream
Tssr71856 within coordinates of
 SNP C C C
rs48566181
MGI SNP Detail		 Chr7:30451609 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 641 bp downstream
Tssr71856 within coordinates of
 SNP G G G
rs586777108
MGI SNP Detail		 Chr7:30451634 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 666 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs580251225
MGI SNP Detail		 Chr7:30451649 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 681 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs583455852
MGI SNP Detail		 Chr7:30451688 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 720 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs587061190
MGI SNP Detail		 Chr7:30451707 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 739 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C C T T T T T T T T T C T C T T T T T C C T T T T
rs48580922
MGI SNP Detail		 Chr7:30451717 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 749 bp downstream
 SNP G G G
rs580642452
MGI SNP Detail		 Chr7:30451742 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 774 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C T T T T T T T T T T
rs584388988
MGI SNP Detail		 Chr7:30451757 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 789 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs47264108
MGI SNP Detail		 Chr7:30451811 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 843 bp downstream
 SNP C C
rs50732404
MGI SNP Detail		 Chr7:30451863 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 895 bp downstream
 SNP G G
rs48609060
MGI SNP Detail		 Chr7:30452143 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1175 bp downstream
 SNP A/G G A G
rs243442759
MGI SNP Detail		 Chr7:30452214 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1246 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48023476
MGI SNP Detail		 Chr7:30452233 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1265 bp downstream
 SNP A/T A A A A A A T T A A A T A T T T A
rs239331235
MGI SNP Detail		 Chr7:30452261 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1293 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48727370
MGI SNP Detail		 Chr7:30452317 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1349 bp downstream
 SNP A/G A G A G
rs216837825
MGI SNP Detail		 Chr7:30452321 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1353 bp downstream
 SNP C/T C T
rs48116594
MGI SNP Detail		 Chr7:30452371 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1403 bp downstream
 SNP A/G G G G G G G A G G G A G G G G
rs49728148
MGI SNP Detail		 Chr7:30452391 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1423 bp downstream
 SNP C/G C C C C C G C C
rs587397465
MGI SNP Detail		 Chr7:30452445 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1477 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs581448195
MGI SNP Detail		 Chr7:30452499 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1531 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs236492008
MGI SNP Detail		 Chr7:30452580 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1612 bp downstream
 SNP A/G G A
rs252900020
MGI SNP Detail		 Chr7:30452615 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1647 bp downstream
 SNP A/G G A
rs230319807
MGI SNP Detail		 Chr7:30452642 Sbsn within coordinates of
Tmem147os within coordinates of
Tssr65808 1674 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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