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Mouse SNP Summary
Symbol
Name
ID 		Tssr68497
transcription start site region 68497
MGI:5996264

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs32118039
MGI SNP Detail		 Chr7:109835263 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1822 bp upstream
 SNP C/T T T T T T T T T T C T T T T C
rs251116572
MGI SNP Detail		 Chr7:109835273 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1812 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs221743149
MGI SNP Detail		 Chr7:109835621 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1464 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs581436116
MGI SNP Detail		 Chr7:109835779 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1306 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240493565
MGI SNP Detail		 Chr7:109835840 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1245 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264434304
MGI SNP Detail		 Chr7:109835845 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1240 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32118042
MGI SNP Detail		 Chr7:109835871 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1214 bp upstream
 SNP C/T C C C C C C T C C T C T T C T T T
rs241836278
MGI SNP Detail		 Chr7:109835914 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1171 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225888937
MGI SNP Detail		 Chr7:109835941 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1144 bp upstream
 SNP A/C C C C C C C C C C C C A A C C C C C C C C C C C A
rs244762307
MGI SNP Detail		 Chr7:109835989 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1096 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32118905
MGI SNP Detail		 Chr7:109836048 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1037 bp upstream
 SNP C/T C C C C C C C C C C T T C T C
rs32118908
MGI SNP Detail		 Chr7:109836161 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 924 bp upstream
 SNP A/C C C C C C C A C C C C C C C C A C
rs257710775
MGI SNP Detail		 Chr7:109836232 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 853 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219794579
MGI SNP Detail		 Chr7:109836249 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 836 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32118911
MGI SNP Detail		 Chr7:109836250 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 835 bp upstream
 SNP G/T T T T T T T T T T G T T T T G
rs249980343
MGI SNP Detail		 Chr7:109836308 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 777 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs212197958
MGI SNP Detail		 Chr7:109836328 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 757 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32119664
MGI SNP Detail		 Chr7:109836338 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 747 bp upstream
 SNP A/G G G G G G G G G G G G G G G A
rs251416029
MGI SNP Detail		 Chr7:109836355 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 730 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs221677703
MGI SNP Detail		 Chr7:109836373 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 712 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233803005
MGI SNP Detail		 Chr7:109836453 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 632 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264189264
MGI SNP Detail		 Chr7:109836486 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 599 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587537091
MGI SNP Detail		 Chr7:109836539 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 546 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32119667
MGI SNP Detail		 Chr7:109836553 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 532 bp upstream
 SNP A/T A A A A A A A A A A T T A A A
rs244578700
MGI SNP Detail		 Chr7:109836567 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 518 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs261253223
MGI SNP Detail		 Chr7:109836926 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 159 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs219825108
MGI SNP Detail		 Chr7:109837055 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 30 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237273069
MGI SNP Detail		 Chr7:109837059 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 26 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs257892892
MGI SNP Detail		 Chr7:109837064 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 21 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227800861
MGI SNP Detail		 Chr7:109837068 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 17 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245676091
MGI SNP Detail		 Chr7:109837081 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 4 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584861521
MGI SNP Detail		 Chr7:109837131 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 43 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32119670
MGI SNP Detail		 Chr7:109837175 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 87 bp downstream
 SNP A/G G G G G G G G G G A G G G G A
rs233472180
MGI SNP Detail		 Chr7:109837317 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 229 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254231414
MGI SNP Detail		 Chr7:109837419 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 331 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212139753
MGI SNP Detail		 Chr7:109837449 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 361 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32119673
MGI SNP Detail		 Chr7:109837531 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 443 bp downstream
 SNP G/T G G G G G G T G G T G T T G T T T
rs245139245
MGI SNP Detail		 Chr7:109837539 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 451 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs216101592
MGI SNP Detail		 Chr7:109837555 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 467 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32120476
MGI SNP Detail		 Chr7:109837661 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 573 bp downstream
 SNP A/G G G G G G A G A G A A G A A A
rs260797237
MGI SNP Detail		 Chr7:109837665 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 577 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs218028609
MGI SNP Detail		 Chr7:109837688 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 600 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235431636
MGI SNP Detail		 Chr7:109837698 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 610 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260904282
MGI SNP Detail		 Chr7:109837888 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 800 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219769795
MGI SNP Detail		 Chr7:109837984 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 896 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs237212719
MGI SNP Detail		 Chr7:109838000 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 912 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251724831
MGI SNP Detail		 Chr7:109838011 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 923 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220563296
MGI SNP Detail		 Chr7:109838112 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1024 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248135562
MGI SNP Detail		 Chr7:109838270 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1182 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264560256
MGI SNP Detail		 Chr7:109838298 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1210 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234422460
MGI SNP Detail		 Chr7:109838321 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1233 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs216148071
MGI SNP Detail		 Chr7:109838322 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1234 bp downstream
 SNP C/T T C
rs256404745
MGI SNP Detail		 Chr7:109838344 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1256 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226607672
MGI SNP Detail		 Chr7:109838346 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1258 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32120479
MGI SNP Detail		 Chr7:109838417 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1329 bp downstream
 SNP A/G A A A A A A G A A A A A A A G A
rs216040338
MGI SNP Detail		 Chr7:109838432 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1344 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231815667
MGI SNP Detail		 Chr7:109838475 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1387 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260420746
MGI SNP Detail		 Chr7:109838535 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1447 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217816865
MGI SNP Detail		 Chr7:109838545 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1457 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237155467
MGI SNP Detail		 Chr7:109838559 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1471 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A
rs248129629
MGI SNP Detail		 Chr7:109838753 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1665 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214399449
MGI SNP Detail		 Chr7:109838754 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1666 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231098054
MGI SNP Detail		 Chr7:109838771 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1683 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251662329
MGI SNP Detail		 Chr7:109838967 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1879 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223844730
MGI SNP Detail		 Chr7:109839020 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1932 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C
rs240076213
MGI SNP Detail		 Chr7:109839035 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1947 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263668668
MGI SNP Detail		 Chr7:109839067 Rr168503 within coordinates of
Swap70 within coordinates of
Tssr68497 1979 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
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Showing SNP(s) 1 - 67 of 67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory