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Mouse SNP Summary
Symbol
Name
ID 		Tssr70642
transcription start site region 70642
MGI:5998409

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Showing SNP(s) 1 - 48 of 48

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213072052
MGI SNP Detail		 Chr7:12765886 Tssr70642 1993 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs231540463
MGI SNP Detail		 Chr7:12765988 Chmp2a within coordinates of
Tssr70642 1891 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250389896
MGI SNP Detail		 Chr7:12766086 Chmp2a within coordinates of
Tssr70642 1793 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215588605
MGI SNP Detail		 Chr7:12766143 Chmp2a within coordinates of
Tssr70642 1736 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T G G T T G T T T T G T T T T T T T T T T T T G T T T T T T T T T T T
rs240842283
MGI SNP Detail		 Chr7:12766308 Chmp2a within coordinates of
Tssr70642 1571 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260283288
MGI SNP Detail		 Chr7:12766555 Chmp2a within coordinates of
Tssr70642 1324 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs13463391
MGI SNP Detail		 Chr7:12766599 Chmp2a within coordinates of
Tssr70642 1280 bp downstream
 SNP A/T A T
rs229674485
MGI SNP Detail		 Chr7:12766829 Chmp2a within coordinates of
Tssr70642 1050 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C C T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs250067372
MGI SNP Detail		 Chr7:12766877 Chmp2a within coordinates of
Tssr70642 1002 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585400545
MGI SNP Detail		 Chr7:12766923 Chmp2a within coordinates of
Tssr70642 956 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219381680
MGI SNP Detail		 Chr7:12766943 Chmp2a within coordinates of
Tssr70642 936 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239452082
MGI SNP Detail		 Chr7:12767035 Chmp2a within coordinates of
Tssr70642 844 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265437605
MGI SNP Detail		 Chr7:12767090 Chmp2a within coordinates of
Tssr70642 789 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs224496230
MGI SNP Detail		 Chr7:12767103 Chmp2a within coordinates of
Tssr70642 776 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249463535
MGI SNP Detail		 Chr7:12767108 Chmp2a within coordinates of
Tssr70642 771 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs579715258
MGI SNP Detail		 Chr7:12767139 Chmp2a within coordinates of
Tssr70642 740 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264234197
MGI SNP Detail		 Chr7:12767204 Chmp2a within coordinates of
Tssr70642 675 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs229521630
MGI SNP Detail		 Chr7:12767264 Chmp2a within coordinates of
Tssr70642 615 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs583221557
MGI SNP Detail		 Chr7:12767324 Chmp2a within coordinates of
Tssr70642 555 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242395236
MGI SNP Detail		 Chr7:12767367 Chmp2a within coordinates of
Tssr70642 512 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs586325710
MGI SNP Detail		 Chr7:12767479 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 400 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254671152
MGI SNP Detail		 Chr7:12767505 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 374 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T C T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs225351536
MGI SNP Detail		 Chr7:12767527 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 352 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs583474137
MGI SNP Detail		 Chr7:12767535 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 344 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs38094382
MGI SNP Detail		 Chr7:12767710 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 169 bp downstream
 SNP A/G A A A A A G A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216371188
MGI SNP Detail		 Chr7:12767944 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 52 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A G A A A A G A A A A A A A A A A A A G A A A A A A A A A A A A
rs580901976
MGI SNP Detail		 Chr7:12768073 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 181 bp upstream
Tssr70644 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238607563
MGI SNP Detail		 Chr7:12768117 Chmp2a within coordinates of
Rr166782 within coordinates of
Tssr70642 225 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs259028448
MGI SNP Detail		 Chr7:12768183 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 291 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219183977
MGI SNP Detail		 Chr7:12768318 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 426 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs229847505
MGI SNP Detail		 Chr7:12768347 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 455 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G C C G G G G G G G C G G G G G G G G G G G C G G G G G G G G G G G
rs250127509
MGI SNP Detail		 Chr7:12768353 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 461 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G C C G G G G G G G C G G G G G G G G G G G C G G G G G G C G G G G
rs219311052
MGI SNP Detail		 Chr7:12768498 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 606 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232376808
MGI SNP Detail		 Chr7:12768601 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Rr368233 within coordinates of
Tssr70642 709 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs258464953
MGI SNP Detail		 Chr7:12768615 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Rr368233 within coordinates of
Tssr70642 723 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G
rs224899497
MGI SNP Detail		 Chr7:12768617 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Rr368233 within coordinates of
Tssr70642 725 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246734445
MGI SNP Detail		 Chr7:12768650 Chmp2a within coordinates of
Cpgi18334 within coordinates of
Rr166782 within coordinates of
Rr368233 within coordinates of
Tssr70642 758 bp upstream
Tssr70648 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265986561
MGI SNP Detail		 Chr7:12768828 Cpgi18334 within coordinates of
Rr166782 within coordinates of
Rr368233 within coordinates of
Tssr70642 936 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A C C A A A A A A A C A A A A A A A A A A A C A A A A A A C A A A A
rs37976741
MGI SNP Detail		 Chr7:12768898 Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 1006 bp upstream
 SNP A/G G G G G G G G G G A G G G
rs223109493
MGI SNP Detail		 Chr7:12768908 Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 1016 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236284950
MGI SNP Detail		 Chr7:12768909 Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 1017 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs254954193
MGI SNP Detail		 Chr7:12768934 Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 1042 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs225429148
MGI SNP Detail		 Chr7:12768944 Cpgi18334 within coordinates of
Rr166782 within coordinates of
Tssr70642 1052 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs261238812
MGI SNP Detail		 Chr7:12769240 Rr166782 within coordinates of
Tssr70642 1348 bp upstream
Ube2m within coordinates of
 SNP C/T T C
rs263270037
MGI SNP Detail		 Chr7:12769525 Rr166782 within coordinates of
Tssr70642 1633 bp upstream
Ube2m within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233270422
MGI SNP Detail		 Chr7:12769745 Tssr70642 1853 bp upstream
Ube2m within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253821661
MGI SNP Detail		 Chr7:12769746 Tssr70642 1854 bp upstream
Ube2m within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs218901027
MGI SNP Detail		 Chr7:12769759 Tssr70642 1867 bp upstream
Ube2m within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
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Showing SNP(s) 1 - 48 of 48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory